Rroxscaffold_2G00094490

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000097
Physical Location & Seq
Forward (+)
15852880 .. 15855357
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094490.1

Sequence Viewer

Length: 1431 bp
ATGCTAGAGGGAAGAACTTCCCGTGGTCCACCTCAAAGCCACGTAAAGGGAGTGCTGAAGTTTGCGAAACTCCTGCACCATAGAGGGTGTTATATCACCTTTGTCAACACAGAGTTCAATCACAAGTTCTTTCTGAAATCTTTAGGCCCTGACTCCTTAGATGGCGTCACTGATTTTCAGTTTGAAACTATTCCAAATGGCCTTCCAGAATTTGACGCTGATGACATCCAAGACATCAATTATTTGCTTTGTGAAACCAGGATGAAATATTGCTTGGCTCCTTTTCGTGACCTCCTCGTAAAACTCAACAATTCTAATACTAATCCTCCAGTGACTTGCATTGTTTCAGATGGTTTCATGTCATTGTTCACCATTACAGCCGCTGAAGAAATTGGAGCCCCCATTGTAGTCTTCAATACTATTGCCGCATCCTCTTACATGGGGTTCAAACAATTTCGTACTTTGGTCCAAAAAGGGCTTGCACCATTAAAAGATGAGAGCTGTCTCACAAATGGTTTCCTGGACAAAGTAATAGATTGGATTCCCGGAATGAAAGATATTCGTTTAAAGGATCTCCCATCGTTTTTTCGAACTACAGATCCAAATGACACGATGTTTAACTTCATCATGGAAGCAACGGACAAAGTTCGTAAAGCTGATGCATTCGTATTTCTTACATTTGAGGCGTTAGAACAAGATGTTTTGGACGCTATGTCATCTATATTTGATCAGTCACTTGTTTATGCAATTGGCCCTCTCGAATTACTTCTCAGTCAGATTCCGGATGGCCCTTTGAAGCATATCGGATACAGCCCGTGGAAAGAAGACATTGAGTGCTTAGAATGGCTGGAGAACAAGGCGCCAAATTCTGTTGTCTATGTGAATTTTGGAAGCATAGCAGTCTTGACACCAAAACAGCTTGTAGAGTTTGGTTGGGGACTTGCAAATTCCAAGTTTCATTTCTTCTGGGTAATTAGGCCTGATCTTGTTATTGGTGAATCAGCTATTCTGCCGCCTGAGTTGGTAGCTGAAACTAAGGAAAGAGGCCTAATAGCAAGTTGGTGCCCACAGGAGCAAGTCCTTAACCATCCATCAGTTGGTGGATTTTTAACACACTGCGGCTGGAATTCGACCATTGAGAGTCTGACGGCTGGAGTGCCTATGCTCTGTTGGCCATTCTTTGCTGACCAGCAAACAAACTGTTTCTATACTTGTAACAAATGGGGCATTGGAATGGAGATTAGCAATGATGTCAACAGAGACGAAGTAGAGAAGCTTGTTAGAGAGTTAATGGAAGGAGAGGACGGTGAGAAAATGAAAACTAAGATCATGGAGTGGAAGAAACTTGCGGAAGAAGCCACAGCTCCAGATGGTTCTTCATTCACAAACCTGGACAATTTGGTGAATCAAATTCTGTTATGGAAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

476

Amino Acids

53.71

Weight (kDa)

4.89

Isoelectric Point (pI)

35.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 252 - 445 1.5e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 859, 1062
AccB7I CCANNNNNTGG 1 cut(s) 1097
AccIII TCCGGA 1 cut(s) 781
AciI CCGC 5 cut(s) 381, 426, 1013, 1119, 1349
AclWI GGATC 2 cut(s) 579, 593
AcoI YGGCCR 1 cut(s) 1172
AcsI RAATTY 6 cut(s) 209, 865, 883, 946, 1126, 1410
AcuI CTGAAG 2 cut(s) 77, 405
AcyI GRCGYC 2 cut(s) 165, 860
AfaI GTAC 1 cut(s) 460
AfiI CCNNNNNNNGG 2 cut(s) 46, 1097
AgsI TTSAA 5 cut(s) 118, 185, 415, 448, 796
AhdI GACNNNNNGTC 1 cut(s) 712
AjnI CCWGG 3 cut(s) 257, 519, 1389
AjuI GAANNNNNNNTTGG 4 cut(s) 257, 289, 944, 976
AloI GAACNNNNNNTCC 2 cut(s) 583, 615
AluBI AGCT 7 cut(s) 501, 656, 919, 1004, 1028, 1276, 1364
AluI AGCT 7 cut(s) 501, 656, 919, 1004, 1028, 1276, 1364
Alw26I GTCTC 2 cut(s) 509, 1254
AlwI GGATC 2 cut(s) 579, 593
AlwNI CAGNNNCTG 1 cut(s) 383
Aor13HI TCCGGA 1 cut(s) 781
AoxI GGCC 7 cut(s) 145, 199, 751, 787, 977, 1045, 1172
ApoI RAATTY 6 cut(s) 209, 865, 883, 946, 1126, 1410
Asp700I GAANNNNTTC 3 cut(s) 16, 189, 765
AspLEI GCGC 1 cut(s) 862
AspS9I GGNCC 5 cut(s) 26, 146, 466, 752, 788
AsuC2I CCSGG 1 cut(s) 546
AsuHPI GGTGA 5 cut(s) 88, 361, 1007, 1319, 1414
AsuII TTCGAA 1 cut(s) 589
AvaII GGWCC 2 cut(s) 26, 466
BaeGI GKGCMC 1 cut(s) 1067
BalI TGGCCA 1 cut(s) 1174
BanI GGYRCC 2 cut(s) 859, 1062
BanII GRGCYC 1 cut(s) 400
BbsI GAAGAC 2 cut(s) 403, 831
BccI CCATC 7 cut(s) 155, 344, 586, 779, 1095, 1099, 1364
BceAI ACGGC 1 cut(s) 1164
BcgI CGANNNNNNTGC 2 cut(s) 55, 89
BciT130I CCWGG 3 cut(s) 259, 521, 1391
BciVI GTATCC 1 cut(s) 800
BclI TGATCA 1 cut(s) 727
BcnI CCSGG 1 cut(s) 546
BcoDI GTCTC 2 cut(s) 509, 1254
BfaI CTAG 1 cut(s) 5
BfmI CTRYAG 1 cut(s) 594
BfoI RGCGCY 1 cut(s) 863
BfuI GTATCC 1 cut(s) 800
BisI GCNGC 4 cut(s) 381, 426, 1013, 1120
BlsI GCNGC 4 cut(s) 382, 427, 1014, 1121
Bme1390I CCNGG 4 cut(s) 259, 521, 546, 1391
Bme18I GGWCC 2 cut(s) 26, 466
BmeRI GACNNNNNGTC 1 cut(s) 712
BmgT120I GGNCC 5 cut(s) 26, 146, 466, 752, 788
BmiI GGNNCC 4 cut(s) 279, 397, 861, 1064
BmrFI CCNGG 4 cut(s) 259, 521, 546, 1391
BmsI GCATC 2 cut(s) 437, 649
BpiI GAAGAC 2 cut(s) 403, 831
BpmI CTGGAG 4 cut(s) 312, 869, 1173, 1350
Bpu14I TTCGAA 1 cut(s) 589
BpuMI CCSGG 1 cut(s) 546
BsaAI YACGTR 1 cut(s) 43
BsaHI GRCGYC 2 cut(s) 165, 860
BsaJI CCNNGG 2 cut(s) 22, 815
BsaWI WCCGGW 1 cut(s) 781
BsaXI ACNNNNNCTCC 2 cut(s) 310, 340
Bsc4I CCNNNNNNNGG 2 cut(s) 46, 1097
Bse1I ACTGG 1 cut(s) 329
Bse3DI GCAATG 1 cut(s) 1252
BseAI TCCGGA 1 cut(s) 781
BseBI CCWGG 3 cut(s) 259, 521, 1391
BseDI CCNNGG 2 cut(s) 22, 815
BseGI GGATG 5 cut(s) 225, 267, 428, 790, 1087
BseLI CCNNNNNNNGG 2 cut(s) 46, 1097
BseMI GCAATG 1 cut(s) 1252
BseMII CTCAG 2 cut(s) 784, 1008
BseNI ACTGG 1 cut(s) 329
BseRI GAGGAG 1 cut(s) 284
BseSI GKGCMC 1 cut(s) 1067
BsgI GTGCAG 1 cut(s) 59
BshFI GGCC 7 cut(s) 147, 201, 753, 789, 979, 1047, 1174
BshNI GGYRCC 2 cut(s) 859, 1062
BsiSI CCGG 2 cut(s) 546, 782
BslFI GGGAC 1 cut(s) 951
BslI CCNNNNNNNGG 2 cut(s) 46, 1097
BsmAI GTCTC 2 cut(s) 509, 1254
BsmBI CGTCTC 1 cut(s) 1254
BsmFI GGGAC 1 cut(s) 951
BsmI GAATGC 1 cut(s) 662
BsnI GGCC 7 cut(s) 147, 201, 753, 789, 979, 1047, 1174
Bsp119I TTCGAA 1 cut(s) 589
Bsp1286I GDGCHC 2 cut(s) 400, 1067
Bsp13I TCCGGA 1 cut(s) 781
Bsp143I GATC 5 cut(s) 571, 598, 727, 982, 1326
BspACI CCGC 5 cut(s) 381, 426, 1013, 1119, 1349
BspANI GGCC 7 cut(s) 147, 201, 753, 789, 979, 1047, 1174
BspCNI CTCAG 2 cut(s) 783, 1009
BspEI TCCGGA 1 cut(s) 781
BspLI GGNNCC 4 cut(s) 279, 397, 861, 1064
BspPI GGATC 2 cut(s) 579, 593
BspT104I TTCGAA 1 cut(s) 589
BspT107I GGYRCC 2 cut(s) 859, 1062
BsrDI GCAATG 1 cut(s) 1252
BsrI ACTGG 1 cut(s) 329
BssECI CCNNGG 2 cut(s) 22, 815
BssMI GATC 5 cut(s) 571, 598, 727, 982, 1326
BssNI GRCGYC 2 cut(s) 165, 860
Bst2UI CCWGG 3 cut(s) 259, 521, 1391
Bst4CI ACNGT 2 cut(s) 1202, 1307
BstACI GRCGYC 2 cut(s) 165, 860
BstBAI YACGTR 1 cut(s) 43
BstBI TTCGAA 1 cut(s) 589
BstC8I GCNNGC 1 cut(s) 480
BstDEI CTNAG 6 cut(s) 157, 770, 838, 1017, 1035, 1323
BstDSI CCRYGG 2 cut(s) 22, 815
BstF5I GGATG 5 cut(s) 225, 267, 428, 790, 1087
BstH2I RGCGCY 1 cut(s) 863
BstHHI GCGC 1 cut(s) 862
BstKTI GATC 5 cut(s) 574, 601, 730, 985, 1329
BstMAI GTCTC 2 cut(s) 509, 1254
BstMBI GATC 5 cut(s) 571, 598, 727, 982, 1326
BstMWI GCNNNNNNNGC 2 cut(s) 1171, 1355
BstNI CCWGG 3 cut(s) 259, 521, 1391
BstSCI CCNGG 4 cut(s) 257, 519, 544, 1389
BstSFI CTRYAG 1 cut(s) 594
BstSLI GKGCMC 1 cut(s) 1067
BstV2I GAAGAC 2 cut(s) 403, 831
BstX2I RGATCY 2 cut(s) 571, 598
BstYI RGATCY 2 cut(s) 571, 598
BsuI GTATCC 1 cut(s) 800
BsuRI GGCC 7 cut(s) 147, 201, 753, 789, 979, 1047, 1174
BtgI CCRYGG 2 cut(s) 22, 815
BtsCI GGATG 5 cut(s) 225, 267, 428, 790, 1087
BtsI GCAGTG 1 cut(s) 1114
BtsIMutI CAGTG 3 cut(s) 168, 336, 1114
Cac8I GCNNGC 1 cut(s) 480
CaiI CAGNNNCTG 1 cut(s) 383
CfoI GCGC 1 cut(s) 862
Cfr13I GGNCC 5 cut(s) 26, 146, 466, 752, 788
CseI GACGC 3 cut(s) 154, 224, 716
Csp6I GTAC 1 cut(s) 459
CviAII CATG 4 cut(s) 358, 439, 628, 1330
CviQI GTAC 1 cut(s) 459
DdeI CTNAG 6 cut(s) 157, 770, 838, 1017, 1035, 1323
DinI GGCGCC 1 cut(s) 861
DpnI GATC 5 cut(s) 573, 600, 729, 984, 1328
DpnII GATC 5 cut(s) 571, 598, 727, 982, 1326
DraI TTTAAA 1 cut(s) 567
DriI GACNNNNNGTC 1 cut(s) 712
EaeI YGGCCR 1 cut(s) 1172
Eam1105I GACNNNNNGTC 1 cut(s) 712
Eco147I AGGCCT 2 cut(s) 979, 1047
Eco24I GRGCYC 1 cut(s) 400
Eco47I GGWCC 2 cut(s) 26, 466
Eco57I CTGAAG 2 cut(s) 77, 405
EcoO109I RGGNCCY 1 cut(s) 146
EcoRI GAATTC 1 cut(s) 1126
EcoRII CCWGG 3 cut(s) 257, 519, 1389
EcoT22I ATGCAT 1 cut(s) 664
EcoT38I GRGCYC 1 cut(s) 400
EgeI GGCGCC 1 cut(s) 861
EheI GGCGCC 1 cut(s) 861
Esp3I CGTCTC 1 cut(s) 1254
FaeI CATG 4 cut(s) 361, 442, 631, 1333
FaqI GGGAC 1 cut(s) 951
FatI CATG 4 cut(s) 357, 438, 627, 1329
FbaI TGATCA 1 cut(s) 727
Fnu4HI GCNGC 4 cut(s) 381, 426, 1013, 1120
FokI GGATG 5 cut(s) 212, 274, 415, 797, 1074
FriOI GRGCYC 1 cut(s) 400
Fsp4HI GCNGC 4 cut(s) 381, 426, 1013, 1120
FspBI CTAG 1 cut(s) 5
GlaI GCGC 1 cut(s) 861
GluI GCNGC 4 cut(s) 381, 426, 1013, 1120
GsuI CTGGAG 4 cut(s) 312, 869, 1173, 1350
HaeII RGCGCY 1 cut(s) 863
HaeIII GGCC 7 cut(s) 147, 201, 753, 789, 979, 1047, 1174
HapII CCGG 2 cut(s) 546, 782
HgaI GACGC 3 cut(s) 154, 224, 716
HhaI GCGC 1 cut(s) 862
Hin1I GRCGYC 2 cut(s) 165, 860
Hin1II CATG 4 cut(s) 361, 442, 631, 1333
Hin6I GCGC 1 cut(s) 860
HinP1I GCGC 1 cut(s) 860
HincII GTYRAC 2 cut(s) 106, 1255
HindII GTYRAC 2 cut(s) 106, 1255
HindIII AAGCTT 1 cut(s) 1274
HinfI GANTC 6 cut(s) 152, 541, 778, 998, 1141, 1405
HpaII CCGG 2 cut(s) 546, 782
HphI GGTGA 5 cut(s) 88, 361, 1007, 1319, 1414
Hpy166II GTNNAC 4 cut(s) 29, 106, 369, 1255
Hpy188I TCNGA 5 cut(s) 135, 349, 777, 806, 1146
Hpy188III TCNNGA 6 cut(s) 206, 287, 758, 782, 904, 1367
Hpy8I GTNNAC 4 cut(s) 29, 106, 369, 1255
HpyAV CCTTC 2 cut(s) 212, 1289
HpyCH4III ACNGT 2 cut(s) 1202, 1307
HpyCH4IV ACGT 1 cut(s) 42
HpyCH4V TGCA 6 cut(s) 76, 339, 482, 662, 746, 944
HpyF10VI GCNNNNNNNGC 2 cut(s) 1171, 1355
HpyF3I CTNAG 6 cut(s) 157, 770, 838, 1017, 1035, 1323
HpySE526I ACGT 1 cut(s) 42
Hsp92I GRCGYC 2 cut(s) 165, 860
Hsp92II CATG 4 cut(s) 361, 442, 631, 1333
HspAI GCGC 1 cut(s) 860
KasI GGCGCC 1 cut(s) 859
Kpn2I TCCGGA 1 cut(s) 781
Ksp22I TGATCA 1 cut(s) 727
Kzo9I GATC 5 cut(s) 571, 598, 727, 982, 1326
LmnI GCTCC 4 cut(s) 283, 395, 1072, 1369
LweI GCATC 2 cut(s) 437, 649
MaeI CTAG 1 cut(s) 5
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 5 cut(s) 166, 287, 331, 732, 1214
MalI GATC 5 cut(s) 573, 600, 729, 984, 1328
MboI GATC 5 cut(s) 571, 598, 727, 982, 1326
MboII GAAGA 8 cut(s) 24, 398, 403, 836, 955, 1351, 1364, 1368
MfeI CAATTG 1 cut(s) 747
MflI RGATCY 2 cut(s) 571, 598
MhlI GDGCHC 2 cut(s) 400, 1067
MlsI TGGCCA 1 cut(s) 1174
MluNI TGGCCA 1 cut(s) 1174
Mly113I GGCGCC 1 cut(s) 860
MlyI GAGTC 2 cut(s) 146, 1150
Mox20I TGGCCA 1 cut(s) 1174
Mph1103I ATGCAT 1 cut(s) 664
MroI TCCGGA 1 cut(s) 781
MroXI GAANNNNTTC 3 cut(s) 16, 189, 765
MscI TGGCCA 1 cut(s) 1174
MseI TTAA 6 cut(s) 488, 566, 618, 1083, 1109, 1289
MslI CAYNNNNRTG 1 cut(s) 1232
Msp20I TGGCCA 1 cut(s) 1174
MspA1I CMGCKG 1 cut(s) 383
MspI CCGG 2 cut(s) 546, 782
MspR9I CCNGG 4 cut(s) 259, 521, 546, 1391
MunI CAATTG 1 cut(s) 747
Mva1269I GAATGC 1 cut(s) 662
MvaI CCWGG 3 cut(s) 259, 521, 1391
MwoI GCNNNNNNNGC 2 cut(s) 1171, 1355
NarI GGCGCC 1 cut(s) 860
NciI CCSGG 1 cut(s) 546
NdeII GATC 5 cut(s) 571, 598, 727, 982, 1326
NlaIII CATG 4 cut(s) 361, 442, 631, 1333
NlaIV GGNNCC 4 cut(s) 279, 397, 861, 1064
NmuCI GTSAC 4 cut(s) 166, 287, 331, 732
NsiI ATGCAT 1 cut(s) 664
NspV TTCGAA 1 cut(s) 589
PceI AGGCCT 2 cut(s) 979, 1047
PctI GAATGC 1 cut(s) 662
PdmI GAANNNNTTC 3 cut(s) 16, 189, 765
PfeI GAWTC 4 cut(s) 541, 778, 998, 1405
PflMI CCANNNNNTGG 1 cut(s) 1097
PfoI TCCNGGA 2 cut(s) 519, 544
PkrI GCNGC 4 cut(s) 382, 427, 1014, 1121
PleI GAGTC 2 cut(s) 146, 1149
PluTI GGCGCC 1 cut(s) 863
PpsI GAGTC 2 cut(s) 146, 1149
Ppu21I YACGTR 1 cut(s) 43
Psp6I CCWGG 3 cut(s) 257, 519, 1389
PspGI CCWGG 3 cut(s) 257, 519, 1389
PspN4I GGNNCC 4 cut(s) 279, 397, 861, 1064
PspPI GGNCC 5 cut(s) 26, 146, 466, 752, 788
PstNI CAGNNNCTG 1 cut(s) 383
PsuI RGATCY 2 cut(s) 571, 598
RsaI GTAC 1 cut(s) 460
RsaNI GTAC 1 cut(s) 459
RseI CAYNNNNRTG 1 cut(s) 1232
SaqAI TTAA 6 cut(s) 488, 566, 618, 1083, 1109, 1289
SatI GCNGC 4 cut(s) 381, 426, 1013, 1120
Sau3AI GATC 5 cut(s) 571, 598, 727, 982, 1326
Sau96I GGNCC 5 cut(s) 26, 146, 466, 752, 788
SchI GAGTC 2 cut(s) 146, 1150
ScrFI CCNGG 4 cut(s) 259, 521, 546, 1391
SduI GDGCHC 2 cut(s) 400, 1067
SfaNI GCATC 2 cut(s) 437, 649
SfcI CTRYAG 1 cut(s) 594
SfoI GGCGCC 1 cut(s) 861
SfuI TTCGAA 1 cut(s) 589
SinI GGWCC 2 cut(s) 26, 466
SmiMI CAYNNNNRTG 1 cut(s) 1232
SseBI AGGCCT 2 cut(s) 979, 1047
SsiI CCGC 5 cut(s) 381, 426, 1013, 1119, 1349
SspDI GGCGCC 1 cut(s) 859
SspI AATATT 1 cut(s) 269
SspMI CTAG 1 cut(s) 5
StuI AGGCCT 2 cut(s) 979, 1047
StyD4I CCNGG 4 cut(s) 257, 519, 544, 1389
TaaI ACNGT 2 cut(s) 1202, 1307
TaiI ACGT 1 cut(s) 45
TaqI TCGA 3 cut(s) 589, 759, 1130
TauI GCSGC 4 cut(s) 383, 428, 1015, 1122
TfiI GAWTC 4 cut(s) 541, 778, 998, 1405
Tru1I TTAA 6 cut(s) 488, 566, 618, 1083, 1109, 1289
Tru9I TTAA 6 cut(s) 488, 566, 618, 1083, 1109, 1289
TscAI CASTG 3 cut(s) 175, 336, 1121
TseFI GTSAC 4 cut(s) 166, 287, 331, 732
Tsp45I GTSAC 4 cut(s) 166, 287, 331, 732
TspDTI ATGAA 7 cut(s) 278, 346, 566, 613, 947, 1331, 1368
TspGWI ACGGA 1 cut(s) 653
TspRI CASTG 3 cut(s) 175, 336, 1121
Van91I CCANNNNNTGG 1 cut(s) 1097
VpaK11BI GGWCC 2 cut(s) 26, 466
XapI RAATTY 6 cut(s) 209, 865, 883, 946, 1126, 1410
XcmI CCANNNNNNNNNTGG 1 cut(s) 1094
XmnI GAANNNNTTC 3 cut(s) 16, 189, 765
XspI CTAG 1 cut(s) 5
Zsp2I ATGCAT 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.