Rroxscaffold_2G00094540

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
15891591 .. 15894731
3141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094540.1

Sequence Viewer

Length: 624 bp
ATGGGTTACAGTCTATGGAAAGAAGAACCAGAGTGCCTTGAGTGGCTGGAGAACAGGGCACCAAATTCAGTTGTTTATGTGAATTTTGGTAGCGTAGCAGTCTTGACACCAAAACAGCTCGTAGAGTTTGGTTGGGGACTTGCAAACAGCAAGTATCCTTTCTTCTGGGTAATTAGGCCTGATCTGGTTATTGGCGAGTCAGCAATTTTGCCACCTGAATTTGTATCTGAGATCAAAGATAGAGGTCTGCTAGCAAGTTGGTGCCCGCAAGAGCAAGTACTCAACCATCCATCTGTTGGAGGGTTTCTAACACACAGTGGCTGGAATTCAACCATTGAGAGTTTGACTGCCGGAGTGCCTATGTTGTGTTGGCCATTCTTTGGTGACCAGCAGACAGACTGTTACTTTAGTTGCAAGGAATGGGGTGTTGGCATGGAAATCAGTAACGATGTCAAGAGAGACGAAGCAGAGAAGCTTGTTAAAGAGTTAATGGAGGGAGAGAAGGGCAAGAAAATGAGAAACAAGGCCTTGAATTGGAAGAAGCTTGCGCAAGAAGCCACTGCTCCACATGAAGTCCAAGGGATAATTAAAAATAAGGAAGACGTATTCAGTTTGGTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

207

Amino Acids

23.41

Weight (kDa)

5.11

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 20 - 170 1.7e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 549
AccB1I GGYRCC 2 cut(s) 58, 261
AccB7I CCANNNNNTGG 2 cut(s) 296, 380
AciI CCGC 1 cut(s) 266
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 4 cut(s) 64, 82, 218, 325
AdeI CACNNNGTG 1 cut(s) 317
AfaI GTAC 1 cut(s) 279
AfiI CCNNNNNNNGG 3 cut(s) 296, 380, 534
AgsI TTSAA 2 cut(s) 330, 532
AjuI GAANNNNNNNTTGG 2 cut(s) 411, 443
AluBI AGCT 3 cut(s) 118, 475, 544
AluI AGCT 3 cut(s) 118, 475, 544
Alw26I GTCTC 1 cut(s) 453
AlwNI CAGNNNCTG 1 cut(s) 321
AoxI GGCC 3 cut(s) 176, 371, 525
ApoI RAATTY 4 cut(s) 64, 82, 218, 325
AspLEI GCGC 1 cut(s) 550
AsuHPI GGTGA 1 cut(s) 395
AsuNHI GCTAGC 1 cut(s) 250
BaeGI GKGCMC 2 cut(s) 61, 266
BalI TGGCCA 1 cut(s) 373
BanI GGYRCC 2 cut(s) 58, 261
BarI GAAGNNNNNNTAC 2 cut(s) 146, 178
BbsI GAAGAC 1 cut(s) 606
BccI CCATC 2 cut(s) 294, 298
BciVI GTATCC 1 cut(s) 165
BcoDI GTCTC 1 cut(s) 453
BfaI CTAG 1 cut(s) 251
BfuI GTATCC 1 cut(s) 165
BmcAI AGTACT 1 cut(s) 279
BmiI GGNNCC 2 cut(s) 60, 263
BmtI GCTAGC 1 cut(s) 254
BpiI GAAGAC 1 cut(s) 606
BpmI CTGGAG 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 59
BsaJI CCNNGG 1 cut(s) 577
Bsc4I CCNNNNNNNGG 3 cut(s) 296, 380, 534
BseDI CCNNGG 1 cut(s) 577
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 3 cut(s) 296, 380, 534
BseMII CTCAG 1 cut(s) 219
BseSI GKGCMC 2 cut(s) 61, 266
BshFI GGCC 3 cut(s) 178, 373, 527
BshNI GGYRCC 2 cut(s) 58, 261
BsiSI CCGG 1 cut(s) 351
BslFI GGGAC 1 cut(s) 150
BslI CCNNNNNNNGG 3 cut(s) 296, 380, 534
BsmAI GTCTC 1 cut(s) 453
BsmBI CGTCTC 1 cut(s) 453
BsmFI GGGAC 1 cut(s) 150
BsnI GGCC 3 cut(s) 178, 373, 527
Bsp1286I GDGCHC 2 cut(s) 61, 266
Bsp143I GATC 2 cut(s) 181, 231
BspACI CCGC 1 cut(s) 266
BspANI GGCC 3 cut(s) 178, 373, 527
BspCNI CTCAG 1 cut(s) 220
BspLI GGNNCC 2 cut(s) 60, 263
BspOI GCTAGC 1 cut(s) 254
BspT107I GGYRCC 2 cut(s) 58, 261
BssECI CCNNGG 1 cut(s) 577
BssMI GATC 2 cut(s) 181, 231
BssT1I CCWWGG 1 cut(s) 577
Bst4CI ACNGT 3 cut(s) 11, 317, 401
BstC8I GCNNGC 3 cut(s) 252, 266, 546
BstDEI CTNAG 1 cut(s) 228
BstEII GGTNACC 1 cut(s) 383
BstF5I GGATG 1 cut(s) 286
BstHHI GCGC 1 cut(s) 550
BstKTI GATC 2 cut(s) 184, 234
BstMAI GTCTC 1 cut(s) 453
BstMBI GATC 2 cut(s) 181, 231
BstMWI GCNNNNNNNGC 1 cut(s) 554
BstPI GGTNACC 1 cut(s) 383
BstSLI GKGCMC 2 cut(s) 61, 266
BstV2I GAAGAC 1 cut(s) 606
BsuI GTATCC 1 cut(s) 165
BsuRI GGCC 3 cut(s) 178, 373, 527
BtsCI GGATG 1 cut(s) 286
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 2 cut(s) 322, 558
Cac8I GCNNGC 3 cut(s) 252, 266, 546
CaiI CAGNNNCTG 1 cut(s) 321
CfoI GCGC 1 cut(s) 550
Csp6I GTAC 1 cut(s) 278
CviAII CATG 2 cut(s) 433, 569
CviJI RGCY 9 cut(s) 46, 118, 178, 321, 373, 475, 527, 544, 557
CviKI_1 RGCY 9 cut(s) 46, 118, 178, 321, 373, 475, 527, 544, 557
CviQI GTAC 1 cut(s) 278
DdeI CTNAG 1 cut(s) 228
DpnI GATC 2 cut(s) 183, 233
DpnII GATC 2 cut(s) 181, 231
DraIII CACNNNGTG 1 cut(s) 317
EaeI YGGCCR 1 cut(s) 371
Eco130I CCWWGG 1 cut(s) 577
Eco147I AGGCCT 2 cut(s) 178, 527
Eco91I GGTNACC 1 cut(s) 383
EcoO65I GGTNACC 1 cut(s) 383
EcoRI GAATTC 1 cut(s) 325
EcoT14I CCWWGG 1 cut(s) 577
ErhI CCWWGG 1 cut(s) 577
Esp3I CGTCTC 1 cut(s) 453
FaeI CATG 2 cut(s) 436, 572
FaiI YATR 5 cut(s) 16, 78, 362, 434, 570
FaqI GGGAC 1 cut(s) 150
FatI CATG 2 cut(s) 432, 568
FauI CCCGC 1 cut(s) 273
FokI GGATG 1 cut(s) 273
FspBI CTAG 1 cut(s) 251
FspI TGCGCA 1 cut(s) 549
GlaI GCGC 1 cut(s) 549
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 3 cut(s) 178, 373, 527
HapII CCGG 1 cut(s) 351
HhaI GCGC 1 cut(s) 550
Hin1II CATG 2 cut(s) 436, 572
Hin6I GCGC 1 cut(s) 548
HinP1I GCGC 1 cut(s) 548
HindIII AAGCTT 2 cut(s) 473, 542
HinfI GANTC 1 cut(s) 197
HpaII CCGG 1 cut(s) 351
HphI GGTGA 1 cut(s) 395
Hpy188I TCNGA 1 cut(s) 229
Hpy188III TCNNGA 2 cut(s) 103, 454
HpyAV CCTTC 1 cut(s) 496
HpyCH4III ACNGT 3 cut(s) 11, 317, 401
HpyCH4IV ACGT 1 cut(s) 603
HpyCH4V TGCA 2 cut(s) 143, 414
HpyF10VI GCNNNNNNNGC 1 cut(s) 554
HpyF3I CTNAG 1 cut(s) 228
HpySE526I ACGT 1 cut(s) 603
Hsp92II CATG 2 cut(s) 436, 572
HspAI GCGC 1 cut(s) 548
Kzo9I GATC 2 cut(s) 181, 231
LmnI GCTCC 1 cut(s) 568
MaeI CTAG 1 cut(s) 251
MaeII ACGT 1 cut(s) 603
MaeIII GTNAC 5 cut(s) 5, 383, 401, 443, 616
MalI GATC 2 cut(s) 183, 233
MboI GATC 2 cut(s) 181, 231
MboII GAAGA 4 cut(s) 35, 154, 550, 611
MhlI GDGCHC 2 cut(s) 61, 266
MlsI TGGCCA 1 cut(s) 373
MluCI AATT 8 cut(s) 64, 82, 171, 204, 218, 325, 532, 585
MluNI TGGCCA 1 cut(s) 373
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 1 cut(s) 277
MnlI CCTC 3 cut(s) 236, 293, 487
Mox20I TGGCCA 1 cut(s) 373
MscI TGGCCA 1 cut(s) 373
MseI TTAA 3 cut(s) 480, 488, 588
Msp20I TGGCCA 1 cut(s) 373
MspI CCGG 1 cut(s) 351
MwoI GCNNNNNNNGC 1 cut(s) 554
NdeII GATC 2 cut(s) 181, 231
NheI GCTAGC 1 cut(s) 250
NlaIII CATG 2 cut(s) 436, 572
NlaIV GGNNCC 2 cut(s) 60, 263
NmuCI GTSAC 2 cut(s) 383, 616
NsbI TGCGCA 1 cut(s) 549
PceI AGGCCT 2 cut(s) 178, 527
PflMI CCANNNNNTGG 2 cut(s) 296, 380
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PspEI GGTNACC 1 cut(s) 383
PspN4I GGNNCC 2 cut(s) 60, 263
PstNI CAGNNNCTG 1 cut(s) 321
RsaI GTAC 1 cut(s) 279
RsaNI GTAC 1 cut(s) 278
SaqAI TTAA 3 cut(s) 480, 488, 588
Sau3AI GATC 2 cut(s) 181, 231
ScaI AGTACT 1 cut(s) 279
SchI GAGTC 1 cut(s) 206
SduI GDGCHC 2 cut(s) 61, 266
SetI ASST 6 cut(s) 120, 217, 247, 477, 546, 606
SmlI CTYRAG 1 cut(s) 38
SmoI CTYRAG 1 cut(s) 38
Sse9I AATT 8 cut(s) 64, 82, 171, 204, 218, 325, 532, 585
SseBI AGGCCT 2 cut(s) 178, 527
SsiI CCGC 1 cut(s) 266
SspMI CTAG 1 cut(s) 251
StuI AGGCCT 2 cut(s) 178, 527
StyI CCWWGG 1 cut(s) 577
TaaI ACNGT 3 cut(s) 11, 317, 401
TaiI ACGT 1 cut(s) 606
TasI AATT 8 cut(s) 64, 82, 171, 204, 218, 325, 532, 585
TatI WGTACW 1 cut(s) 277
Tru1I TTAA 3 cut(s) 480, 488, 588
Tru9I TTAA 3 cut(s) 480, 488, 588
TscAI CASTG 2 cut(s) 322, 565
TseFI GTSAC 2 cut(s) 383, 616
Tsp45I GTSAC 2 cut(s) 383, 616
TspDTI ATGAA 1 cut(s) 585
TspRI CASTG 2 cut(s) 322, 565
Van91I CCANNNNNTGG 2 cut(s) 296, 380
XapI RAATTY 4 cut(s) 64, 82, 218, 325
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XspI CTAG 1 cut(s) 251
ZrmI AGTACT 1 cut(s) 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.