MD17G1125000.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000097
Physical Location & Seq
Reverse (-)
10875148 .. 10877316
2169 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1125000.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGAGTTCCAATATTGTACTCTGTAATAAGCCTCATGCTGTATGCATTCCCCTTCCATTTCAAAGCCATATAAAGGCTATGCTCAAGTTAGCAAAGCTCCTACACTACAGAGGTTTCCATGTAACTTTTGTCAATACGGAGTTCAACCAACGACGCTTTCTTAAATCTTTAGGACCAAACTCCCTTGATCACTTCCCCAATTTTCAGTTTGAAACAATTCCGGATGGCCTTCCAGATTCAGAGGCTGATGCAACAACCCGAAACCTCCCCTTGCTATGTGATTCCATAAGAAAAAATTTCTTGTCTCCATTCCGTAACCTCCTCTTAAAACTCAATGACACGGCCAGTTCCAATAACAGTTTTGTTATTCCTCCAGTAACTTCCATTGTTTCAGATGGTTTCATGCCTTTTGCCATCACAGCTGCTGAAGAACTTGGACTCCCTATCGCAGTGTTCTTCACTGTGGCTGCGGTCGGATTCATGGGCTGTAAGCAATACCCCACTTTGGTGGAAAAGGGACTTGCACCACTCAAAGATGAGAGTTATTTCACAAATGGTTTTCTGGATATGGTCTTAGATTGGATTCCAGGAGTAAAAGCTATCCGTTTAAGGGATCTTCCAGCCTCCTTTCAAACTACTAATCCCGATGACATCAGGTTTAACTTCATCTTGGAAGCAGCTTTTGAAGTTCATAAAGCTTCAGCGGTTGTTGTTCATACTTTTGATGCATTGGAGCCAGATGTTTTGGATGCTTTGTCATCTATGATTCCACATGTTTATGCCGTTGGCCCTCTCCAGTTGCTTCTCAATCAGGTACCAGAAGACCCTTTGGAGCCTATAGGTTACAGTCTGTGGAAAGAAGAAACGGAGGGCCTCGAGTGGTTAAATGCCAAGGCGCCAAATTCTGTTGTTTATGTGAATTTTGGCAGTTTAGCGGTTGTCACGCCTCAACAACTTATTGAGTTTGGTTGGGGACTTGCAAATAGCAAGCTTCCATTCTTTTGGGTAATTAGACCTAATTTGGTAGTTGGTGAATCTGCGAATTTTCCACCCGAGTTTGCGGCTGAAACTAAGGAAAGAGGTCTAATAACAGGTTGGTGCCCACAAGAGCAAGTCCTTAACCATCCATCAGTTGGAGGGTTTTTAACACACAGTGGTTGGAATTCAACCATTGAGAGTCTGTCTGCCGGAGTGCCTATGCTCTGTTGTCCCTTATTTGCCGACCAACGAACAAATTGTCTCTATACTTGTAATGAATGGGGTATTGGCATGGAAATCAGTAAGGATGCCAAGAGAGACGATGTCGAGAAGATTGTCAAAGAGATGATTGTGGGAGAGAAGGGTAAGAAAATGAAAAATAAGGCCGAGGAGTGGAAGAAACTAGCAGAAAAGGCAACTGATCCACATGGTTCTTCATGGACCAACTTAGACAATTTGGTGAATCGAGTGCTATTAAGGAAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

489

Amino Acids

54.28

Weight (kDa)

5.64

Isoelectric Point (pI)

34.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 220 - 449 3.7e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 814
AccB1I GGYRCC 3 cut(s) 814, 895, 1098
AccB7I CCANNNNNTGG 1 cut(s) 1133
AccIII TCCGGA 1 cut(s) 220
AciI CCGC 4 cut(s) 470, 704, 935, 1061
AclWI GGATC 2 cut(s) 621, 1394
AcoI YGGCCR 1 cut(s) 342
AcsI RAATTY 5 cut(s) 295, 901, 919, 1042, 1162
AcuI CTGAAG 2 cut(s) 447, 684
AcyI GRCGYC 1 cut(s) 896
AdeI CACNNNGTG 1 cut(s) 1154
AfaI GTAC 2 cut(s) 18, 816
AfiI CCNNNNNNNGG 5 cut(s) 73, 505, 610, 1133, 1371
AflIII ACRYGT 1 cut(s) 772
AgsI TTSAA 6 cut(s) 62, 145, 212, 632, 686, 1167
AjnI CCWGG 1 cut(s) 586
AjuI GAANNNNNNNTTGG 4 cut(s) 141, 173, 1248, 1280
AleI CACNNNNGTG 1 cut(s) 506
AloI GAACNNNNNNTCC 2 cut(s) 423, 455
AluBI AGCT 6 cut(s) 97, 422, 599, 680, 698, 991
AluI AGCT 6 cut(s) 97, 422, 599, 680, 698, 991
Alw26I GTCTC 3 cut(s) 309, 1244, 1290
AlwI GGATC 2 cut(s) 621, 1394
AlwNI CAGNNNCTG 2 cut(s) 245, 425
Ama87I CYCGRG 2 cut(s) 875, 1052
Aor13HI TCCGGA 1 cut(s) 220
AoxI GGCC 5 cut(s) 226, 342, 787, 871, 1362
ApeKI GCWGC 3 cut(s) 422, 467, 677
ApoI RAATTY 5 cut(s) 295, 901, 919, 1042, 1162
ArsI GACNNNNNNTTYG 2 cut(s) 1222, 1254
Asp700I GAANNNNTTC 1 cut(s) 216
Asp718I GGTACC 1 cut(s) 814
AspLEI GCGC 1 cut(s) 898
AspS9I GGNCC 4 cut(s) 173, 788, 871, 1419
AsuHPI GGTGA 2 cut(s) 1043, 1450
AvaI CYCGRG 2 cut(s) 875, 1052
AvaII GGWCC 2 cut(s) 173, 1419
BaeGI GKGCMC 1 cut(s) 1103
BanI GGYRCC 3 cut(s) 814, 895, 1098
BbsI GAAGAC 1 cut(s) 828
BbvI GCAGC 3 cut(s) 409, 454, 689
BccI CCATC 5 cut(s) 218, 389, 422, 1131, 1135
BceAI ACGGC 2 cut(s) 357, 767
BciT130I CCWGG 1 cut(s) 588
BclI TGATCA 1 cut(s) 187
BcoDI GTCTC 3 cut(s) 309, 1244, 1290
BfaI CTAG 2 cut(s) 1382, 1465
BfmI CTRYAG 2 cut(s) 106, 837
BfoI RGCGCY 1 cut(s) 899
BisI GCNGC 4 cut(s) 423, 468, 678, 1062
BlsI GCNGC 4 cut(s) 424, 469, 679, 1063
Bme1390I CCNGG 1 cut(s) 588
Bme18I GGWCC 2 cut(s) 173, 1419
BmeT110I CYCGRG 2 cut(s) 875, 1052
BmgT120I GGNCC 4 cut(s) 173, 788, 871, 1419
BmiI GGNNCC 5 cut(s) 735, 816, 834, 897, 1100
BmrFI CCNGG 1 cut(s) 588
BmsI GCATC 4 cut(s) 238, 715, 739, 1276
BpiI GAAGAC 1 cut(s) 828
BpmI CTGGAG 2 cut(s) 357, 779
BpuEI CTTGAG 1 cut(s) 68
BsaHI GRCGYC 1 cut(s) 896
BsaJI CCNNGG 2 cut(s) 891, 1365
BsaWI WCCGGW 1 cut(s) 220
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 505, 610, 1133, 1371
Bse1I ACTGG 3 cut(s) 345, 374, 796
BseAI TCCGGA 1 cut(s) 220
BseBI CCWGG 1 cut(s) 588
BseDI CCNNGG 2 cut(s) 891, 1365
BseGI GGATG 4 cut(s) 229, 754, 1123, 1291
BseLI CCNNNNNNNGG 5 cut(s) 73, 505, 610, 1133, 1371
BseNI ACTGG 3 cut(s) 345, 374, 796
BseRI GAGGAG 2 cut(s) 311, 1382
BseSI GKGCMC 1 cut(s) 1103
BseXI GCAGC 3 cut(s) 409, 454, 689
Bsh1285I CGRYCG 1 cut(s) 474
BshFI GGCC 5 cut(s) 228, 344, 789, 873, 1364
BshNI GGYRCC 3 cut(s) 814, 895, 1098
BsiEI CGRYCG 1 cut(s) 474
BsiHKCI CYCGRG 2 cut(s) 875, 1052
BsiSI CCGG 2 cut(s) 221, 1188
BslFI GGGAC 3 cut(s) 531, 987, 1194
BslI CCNNNNNNNGG 5 cut(s) 73, 505, 610, 1133, 1371
BsmAI GTCTC 3 cut(s) 309, 1244, 1290
BsmBI CGTCTC 1 cut(s) 1290
BsmFI GGGAC 3 cut(s) 531, 987, 1194
BsmI GAATGC 1 cut(s) 45
BsnI GGCC 5 cut(s) 228, 344, 789, 873, 1364
BsoBI CYCGRG 2 cut(s) 875, 1052
Bsp1286I GDGCHC 1 cut(s) 1103
Bsp13I TCCGGA 1 cut(s) 220
Bsp143I GATC 3 cut(s) 187, 613, 1399
BspACI CCGC 4 cut(s) 470, 704, 935, 1061
BspANI GGCC 5 cut(s) 228, 344, 789, 873, 1364
BspEI TCCGGA 1 cut(s) 220
BspLI GGNNCC 5 cut(s) 735, 816, 834, 897, 1100
BspPI GGATC 2 cut(s) 621, 1394
BspT107I GGYRCC 3 cut(s) 814, 895, 1098
BsrI ACTGG 3 cut(s) 345, 374, 796
BssECI CCNNGG 2 cut(s) 891, 1365
BssMI GATC 3 cut(s) 187, 613, 1399
BssNI GRCGYC 1 cut(s) 896
BssT1I CCWWGG 1 cut(s) 891
Bst2UI CCWGG 1 cut(s) 588
Bst4CI ACNGT 4 cut(s) 359, 463, 848, 1154
BstACI GRCGYC 1 cut(s) 896
BstC8I GCNNGC 1 cut(s) 989
BstDEI CTNAG 3 cut(s) 574, 1071, 1426
BstF5I GGATG 4 cut(s) 229, 754, 1123, 1291
BstH2I RGCGCY 1 cut(s) 899
BstHHI GCGC 1 cut(s) 898
BstKTI GATC 3 cut(s) 190, 616, 1402
BstMAI GTCTC 3 cut(s) 309, 1244, 1290
BstMBI GATC 3 cut(s) 187, 613, 1399
BstMCI CGRYCG 1 cut(s) 474
BstMWI GCNNNNNNNGC 2 cut(s) 419, 1391
BstNI CCWGG 1 cut(s) 588
BstNSI RCATGY 1 cut(s) 776
BstSCI CCNGG 1 cut(s) 586
BstSFI CTRYAG 2 cut(s) 106, 837
BstSLI GKGCMC 1 cut(s) 1103
BstV1I GCAGC 3 cut(s) 409, 454, 689
BstV2I GAAGAC 1 cut(s) 828
BstX2I RGATCY 1 cut(s) 613
BstXI CCANNNNNNTGG 2 cut(s) 508, 1002
BstYI RGATCY 1 cut(s) 613
BsuRI GGCC 5 cut(s) 228, 344, 789, 873, 1364
BtsCI GGATG 4 cut(s) 229, 754, 1123, 1291
BtsI GCAGTG 1 cut(s) 456
BtsIMutI CAGTG 3 cut(s) 456, 459, 1159
Cac8I GCNNGC 1 cut(s) 989
CaiI CAGNNNCTG 2 cut(s) 245, 425
CfoI GCGC 1 cut(s) 898
Cfr13I GGNCC 4 cut(s) 173, 788, 871, 1419
CseI GACGC 1 cut(s) 162
Csp6I GTAC 2 cut(s) 17, 815
CviAII CATG 8 cut(s) 35, 119, 403, 481, 773, 1270, 1406, 1416
CviQI GTAC 2 cut(s) 17, 815
DdeI CTNAG 3 cut(s) 574, 1071, 1426
DinI GGCGCC 1 cut(s) 897
DpnI GATC 3 cut(s) 189, 615, 1401
DpnII GATC 3 cut(s) 187, 613, 1399
DraIII CACNNNGTG 1 cut(s) 1154
EaeI YGGCCR 1 cut(s) 342
Eco130I CCWWGG 1 cut(s) 891
Eco47I GGWCC 2 cut(s) 173, 1419
Eco57I CTGAAG 2 cut(s) 447, 684
Eco88I CYCGRG 2 cut(s) 875, 1052
EcoO109I RGGNCCY 1 cut(s) 871
EcoRI GAATTC 1 cut(s) 1162
EcoRII CCWGG 1 cut(s) 586
EcoT14I CCWWGG 1 cut(s) 891
EcoT22I ATGCAT 2 cut(s) 47, 730
EgeI GGCGCC 1 cut(s) 897
EheI GGCGCC 1 cut(s) 897
ErhI CCWWGG 1 cut(s) 891
Esp3I CGTCTC 1 cut(s) 1290
FaeI CATG 8 cut(s) 38, 122, 406, 484, 776, 1273, 1409, 1419
FaqI GGGAC 3 cut(s) 531, 987, 1194
FatI CATG 8 cut(s) 34, 118, 402, 480, 772, 1269, 1405, 1415
FbaI TGATCA 1 cut(s) 187
Fnu4HI GCNGC 4 cut(s) 423, 468, 678, 1062
FokI GGATG 4 cut(s) 236, 761, 1110, 1298
Fsp4HI GCNGC 4 cut(s) 423, 468, 678, 1062
FspBI CTAG 2 cut(s) 1382, 1465
GlaI GCGC 1 cut(s) 897
GluI GCNGC 4 cut(s) 423, 468, 678, 1062
GsuI CTGGAG 2 cut(s) 357, 779
HaeII RGCGCY 1 cut(s) 899
HaeIII GGCC 5 cut(s) 228, 344, 789, 873, 1364
HapII CCGG 2 cut(s) 221, 1188
HgaI GACGC 1 cut(s) 162
HhaI GCGC 1 cut(s) 898
Hin1I GRCGYC 1 cut(s) 896
Hin1II CATG 8 cut(s) 38, 122, 406, 484, 776, 1273, 1409, 1419
Hin6I GCGC 1 cut(s) 896
HinP1I GCGC 1 cut(s) 896
HindIII AAGCTT 2 cut(s) 696, 989
HinfI GANTC 9 cut(s) 236, 281, 438, 477, 583, 766, 1034, 1177, 1441
HpaII CCGG 2 cut(s) 221, 1188
HphI GGTGA 2 cut(s) 1043, 1450
Hpy188I TCNGA 3 cut(s) 241, 394, 476
Hpy188III TCNNGA 5 cut(s) 221, 233, 563, 644, 1306
Hpy99I CGWCG 1 cut(s) 156
HpyAV CCTTC 3 cut(s) 62, 239, 1333
HpyCH4III ACNGT 4 cut(s) 359, 463, 848, 1154
HpyCH4V TGCA 5 cut(s) 45, 251, 524, 728, 980
HpyF10VI GCNNNNNNNGC 2 cut(s) 419, 1391
HpyF3I CTNAG 3 cut(s) 574, 1071, 1426
Hsp92I GRCGYC 1 cut(s) 896
Hsp92II CATG 8 cut(s) 38, 122, 406, 484, 776, 1273, 1409, 1419
HspAI GCGC 1 cut(s) 896
KasI GGCGCC 1 cut(s) 895
Kpn2I TCCGGA 1 cut(s) 220
KpnI GGTACC 1 cut(s) 818
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 3 cut(s) 187, 613, 1399
LmnI GCTCC 3 cut(s) 102, 733, 832
Lsp1109I GCAGC 3 cut(s) 409, 454, 689
LweI GCATC 4 cut(s) 238, 715, 739, 1276
MaeI CTAG 2 cut(s) 1382, 1465
MaeIII GTNAC 5 cut(s) 121, 314, 376, 842, 940
MalI GATC 3 cut(s) 189, 615, 1401
MboI GATC 3 cut(s) 187, 613, 1399
MboII GAAGA 8 cut(s) 440, 448, 608, 833, 872, 1321, 1387, 1404
MflI RGATCY 1 cut(s) 613
MhlI GDGCHC 1 cut(s) 1103
Mly113I GGCGCC 1 cut(s) 896
MlyI GAGTC 2 cut(s) 432, 1186
MmeI TCCRAC 3 cut(s) 454, 1114, 1139
Mph1103I ATGCAT 2 cut(s) 47, 730
MroI TCCGGA 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 216
MseI TTAA 8 cut(s) 162, 326, 608, 660, 884, 1119, 1145, 1454
MslI CAYNNNNRTG 2 cut(s) 506, 777
MspA1I CMGCKG 2 cut(s) 422, 704
MspI CCGG 2 cut(s) 221, 1188
MspR9I CCNGG 1 cut(s) 588
Mva1269I GAATGC 1 cut(s) 45
MvaI CCWGG 1 cut(s) 588
MwoI GCNNNNNNNGC 2 cut(s) 419, 1391
NarI GGCGCC 1 cut(s) 896
NdeII GATC 3 cut(s) 187, 613, 1399
NlaIII CATG 8 cut(s) 38, 122, 406, 484, 776, 1273, 1409, 1419
NlaIV GGNNCC 5 cut(s) 735, 816, 834, 897, 1100
NmeAIII GCCGAG 1 cut(s) 1390
NmuCI GTSAC 1 cut(s) 940
NsiI ATGCAT 2 cut(s) 47, 730
NspI RCATGY 1 cut(s) 776
OliI CACNNNNGTG 1 cut(s) 506
PaeR7I CTCGAG 1 cut(s) 875
PciI ACATGT 1 cut(s) 772
PctI GAATGC 1 cut(s) 45
PdmI GAANNNNTTC 1 cut(s) 216
PfeI GAWTC 7 cut(s) 236, 281, 477, 583, 766, 1034, 1441
PflFI GACNNNGTC 1 cut(s) 1301
PflMI CCANNNNNTGG 1 cut(s) 1133
PfoI TCCNGGA 1 cut(s) 586
PkrI GCNGC 4 cut(s) 424, 469, 679, 1063
PleI GAGTC 2 cut(s) 432, 1185
PluTI GGCGCC 1 cut(s) 899
PpsI GAGTC 2 cut(s) 432, 1185
PscI ACATGT 1 cut(s) 772
Psp6I CCWGG 1 cut(s) 586
PspGI CCWGG 1 cut(s) 586
PspN4I GGNNCC 5 cut(s) 735, 816, 834, 897, 1100
PspPI GGNCC 4 cut(s) 173, 788, 871, 1419
PspXI VCTCGAGB 1 cut(s) 875
PstNI CAGNNNCTG 2 cut(s) 245, 425
PsuI RGATCY 1 cut(s) 613
PsyI GACNNNGTC 1 cut(s) 1301
PvuII CAGCTG 1 cut(s) 422
RsaI GTAC 2 cut(s) 18, 816
RsaNI GTAC 2 cut(s) 17, 815
RseI CAYNNNNRTG 2 cut(s) 506, 777
SaqAI TTAA 8 cut(s) 162, 326, 608, 660, 884, 1119, 1145, 1454
SatI GCNGC 4 cut(s) 423, 468, 678, 1062
Sau3AI GATC 3 cut(s) 187, 613, 1399
Sau96I GGNCC 4 cut(s) 173, 788, 871, 1419
SchI GAGTC 2 cut(s) 432, 1186
ScrFI CCNGG 1 cut(s) 588
SduI GDGCHC 1 cut(s) 1103
SfaNI GCATC 4 cut(s) 238, 715, 739, 1276
SfcI CTRYAG 2 cut(s) 106, 837
SfoI GGCGCC 1 cut(s) 897
Sfr274I CTCGAG 1 cut(s) 875
SinI GGWCC 2 cut(s) 173, 1419
SlaI CTCGAG 1 cut(s) 875
SmiMI CAYNNNNRTG 2 cut(s) 506, 777
SmlI CTYRAG 2 cut(s) 83, 875
SmoI CTYRAG 2 cut(s) 83, 875
SsiI CCGC 4 cut(s) 470, 704, 935, 1061
SspDI GGCGCC 1 cut(s) 895
SspI AATATT 1 cut(s) 13
SspMI CTAG 2 cut(s) 1382, 1465
StyD4I CCNGG 1 cut(s) 586
StyI CCWWGG 1 cut(s) 891
TaaI ACNGT 4 cut(s) 359, 463, 848, 1154
TaqI TCGA 3 cut(s) 876, 1305, 1444
TatI WGTACW 1 cut(s) 16
TauI GCSGC 1 cut(s) 1064
TfiI GAWTC 7 cut(s) 236, 281, 477, 583, 766, 1034, 1441
Tru1I TTAA 8 cut(s) 162, 326, 608, 660, 884, 1119, 1145, 1454
Tru9I TTAA 8 cut(s) 162, 326, 608, 660, 884, 1119, 1145, 1454
TscAI CASTG 3 cut(s) 456, 466, 1159
TseFI GTSAC 1 cut(s) 940
TseI GCWGC 3 cut(s) 422, 467, 677
Tsp45I GTSAC 1 cut(s) 940
TspDTI ATGAA 8 cut(s) 391, 469, 655, 680, 704, 1269, 1367, 1404
TspGWI ACGGA 4 cut(s) 152, 302, 593, 881
TspRI CASTG 3 cut(s) 456, 466, 1159
Tth111I GACNNNGTC 1 cut(s) 1301
Van91I CCANNNNNTGG 1 cut(s) 1133
VpaK11BI GGWCC 2 cut(s) 173, 1419
XapI RAATTY 5 cut(s) 295, 901, 919, 1042, 1162
XceI RCATGY 1 cut(s) 776
XcmI CCANNNNNNNNNTGG 1 cut(s) 1130
XhoI CTCGAG 1 cut(s) 875
XmnI GAANNNNTTC 1 cut(s) 216
XspI CTAG 2 cut(s) 1382, 1465
Zsp2I ATGCAT 2 cut(s) 47, 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.