RLG00000018804

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
36505595 .. 36507746
2152 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018804

Sequence Viewer

Length: 636 bp
ATGGCTTCTAAGAAGCCTCATGCTGTGTGTATTCCAGCTCCATCTCTACGCCACATAAAGGCATTTGAAACCATTTCGGATGGCCTACCAGATTCTGATGTTGATCCCATGAGCTTGCTTTGTGAAAACAAACATATGAAAACTTTGTTGCCTCCCTTTCGCGGCCTCCTCACAAAACTCAACAATGATTTTACTAATCCTCTAGTGACTTGCATTGTTTCATATGGTTTCTTGTGGATGTTCACCATTTCAGCTGCTCAAGAAATTGGAGTCCCCATAGTGCTCTTCGAAACTATTGCTGCATCAACATTCATGGTGTTCACACAGTTTCGCACTTTGGTCCAAAAATGGCTTGTACCACTCAAAGATGAGGGCTGTTTCACAAATGGATTTTTGGACAAAGTGATAGATATGGTTCCGGGAATGAAAGATATTCGTTTAAAGGATCTCCCAACCTTTATTTTAACTACAGATCCAAATGTCACCATGCTTAACTTTTTCATGGAAACAGTGGATAACGTTCACAAAGCATTGGCAGTTGTATTTCCTACTTTTGATGCTTTGGAACAAGTTGTGTTGGATGCTTTCTCATCTATATTTGATCGGCCACTTATTTATGCAATTGGTCCCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

212

Amino Acids

23.6

Weight (kDa)

5.29

Isoelectric Point (pI)

30.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 162
AciI CCGC 1 cut(s) 162
AclI AACGTT 1 cut(s) 519
AclWI GGATC 3 cut(s) 98, 453, 467
AcoI YGGCCR 1 cut(s) 605
AfaI GTAC 1 cut(s) 357
AfiI CCNNNNNNNGG 2 cut(s) 58, 161
AgsI TTSAA 1 cut(s) 68
AluBI AGCT 3 cut(s) 38, 114, 254
AluI AGCT 3 cut(s) 38, 114, 254
Alw21I GWGCWC 1 cut(s) 285
AlwI GGATC 3 cut(s) 98, 453, 467
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 3 cut(s) 82, 163, 605
ApeKI GCWGC 2 cut(s) 254, 299
AspS9I GGNCC 2 cut(s) 340, 626
AsuC2I CCSGG 1 cut(s) 420
AsuHPI GGTGA 2 cut(s) 235, 475
AsuII TTCGAA 1 cut(s) 288
AvaII GGWCC 2 cut(s) 340, 626
Bbv12I GWGCWC 1 cut(s) 285
BbvI GCAGC 2 cut(s) 241, 286
BccI CCATC 2 cut(s) 49, 74
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BcnI CCSGG 1 cut(s) 420
BfaI CTAG 1 cut(s) 203
BfmI CTRYAG 1 cut(s) 468
BisI GCNGC 3 cut(s) 163, 255, 300
BlsI GCNGC 3 cut(s) 164, 256, 301
Bme1390I CCNGG 1 cut(s) 420
Bme18I GGWCC 2 cut(s) 340, 626
BmgT120I GGNCC 2 cut(s) 340, 626
BmiI GGNNCC 2 cut(s) 417, 628
BmrFI CCNGG 1 cut(s) 420
BmsI GCATC 3 cut(s) 311, 547, 571
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 243
BpuMI CCSGG 1 cut(s) 420
BsaBI GATNNNNATC 1 cut(s) 102
Bsc4I CCNNNNNNNGG 2 cut(s) 58, 161
Bse8I GATNNNNATC 1 cut(s) 102
BseGI GGATG 3 cut(s) 85, 243, 586
BseJI GATNNNNATC 1 cut(s) 102
BseLI CCNNNNNNNGG 2 cut(s) 58, 161
BseRI GAGGAG 1 cut(s) 158
BseXI GCAGC 2 cut(s) 241, 286
Bsh1236I CGCG 1 cut(s) 162
BshFI GGCC 3 cut(s) 84, 165, 607
BsiHKAI GWGCWC 1 cut(s) 285
BsiSI CCGG 1 cut(s) 419
BslFI GGGAC 2 cut(s) 257, 612
BslI CCNNNNNNNGG 2 cut(s) 58, 161
BsmFI GGGAC 2 cut(s) 257, 612
BsnI GGCC 3 cut(s) 84, 165, 607
Bsp119I TTCGAA 1 cut(s) 288
Bsp1286I GDGCHC 1 cut(s) 285
Bsp143I GATC 4 cut(s) 103, 445, 472, 601
BspACI CCGC 1 cut(s) 162
BspANI GGCC 3 cut(s) 84, 165, 607
BspFNI CGCG 1 cut(s) 162
BspLI GGNNCC 2 cut(s) 417, 628
BspPI GGATC 3 cut(s) 98, 453, 467
BspQI GCTCTTC 1 cut(s) 290
BspT104I TTCGAA 1 cut(s) 288
BssMI GATC 4 cut(s) 103, 445, 472, 601
Bst4CI ACNGT 2 cut(s) 327, 511
Bst6I CTCTTC 1 cut(s) 290
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 116
BstDEI CTNAG 1 cut(s) 9
BstF5I GGATG 3 cut(s) 85, 243, 586
BstFNI CGCG 1 cut(s) 162
BstKTI GATC 4 cut(s) 106, 448, 475, 604
BstMBI GATC 4 cut(s) 103, 445, 472, 601
BstSCI CCNGG 1 cut(s) 418
BstSFI CTRYAG 1 cut(s) 468
BstUI CGCG 1 cut(s) 162
BstV1I GCAGC 2 cut(s) 241, 286
BstX2I RGATCY 2 cut(s) 445, 472
BstYI RGATCY 2 cut(s) 445, 472
BsuRI GGCC 3 cut(s) 84, 165, 607
BtsCI GGATG 3 cut(s) 85, 243, 586
BtsIMutI CAGTG 1 cut(s) 516
Cac8I GCNNGC 1 cut(s) 116
CaiI CAGNNNCTG 1 cut(s) 95
Cfr13I GGNCC 2 cut(s) 340, 626
Csp6I GTAC 1 cut(s) 356
CviAII CATG 5 cut(s) 20, 109, 313, 487, 502
CviQI GTAC 1 cut(s) 356
DdeI CTNAG 1 cut(s) 9
DpnI GATC 4 cut(s) 105, 447, 474, 603
DpnII GATC 4 cut(s) 103, 445, 472, 601
DraI TTTAAA 1 cut(s) 441
EaeI YGGCCR 1 cut(s) 605
Eam1104I CTCTTC 1 cut(s) 290
EarI CTCTTC 1 cut(s) 290
Eco47I GGWCC 2 cut(s) 340, 626
FaeI CATG 5 cut(s) 23, 112, 316, 490, 505
FaqI GGGAC 2 cut(s) 257, 612
FatI CATG 5 cut(s) 19, 108, 312, 486, 501
FauNDI CATATG 2 cut(s) 135, 223
Fnu4HI GCNGC 3 cut(s) 163, 255, 300
FokI GGATG 3 cut(s) 92, 250, 593
Fsp4HI GCNGC 3 cut(s) 163, 255, 300
FspBI CTAG 1 cut(s) 203
GluI GCNGC 3 cut(s) 163, 255, 300
HaeIII GGCC 3 cut(s) 84, 165, 607
HapII CCGG 1 cut(s) 419
Hin1II CATG 5 cut(s) 23, 112, 316, 490, 505
HinfI GANTC 2 cut(s) 92, 270
HpaII CCGG 1 cut(s) 419
HphI GGTGA 2 cut(s) 235, 475
Hpy166II GTNNAC 3 cut(s) 243, 321, 523
Hpy188I TCNGA 2 cut(s) 79, 97
Hpy188III TCNNGA 1 cut(s) 260
Hpy8I GTNNAC 3 cut(s) 243, 321, 523
HpyCH4III ACNGT 2 cut(s) 327, 511
HpyCH4IV ACGT 1 cut(s) 519
HpyCH4V TGCA 3 cut(s) 213, 302, 620
HpyF3I CTNAG 1 cut(s) 9
HpySE526I ACGT 1 cut(s) 519
Hsp92II CATG 5 cut(s) 23, 112, 316, 490, 505
Kzo9I GATC 4 cut(s) 103, 445, 472, 601
LguI GCTCTTC 1 cut(s) 290
LmnI GCTCC 1 cut(s) 43
LpnPI CCDG 3 cut(s) 48, 102, 432
Lsp1109I GCAGC 2 cut(s) 241, 286
LweI GCATC 3 cut(s) 311, 547, 571
MaeI CTAG 1 cut(s) 203
MaeII ACGT 1 cut(s) 519
MaeIII GTNAC 2 cut(s) 205, 481
MalI GATC 4 cut(s) 105, 447, 474, 603
MboI GATC 4 cut(s) 103, 445, 472, 601
MboII GAAGA 1 cut(s) 277
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 2 cut(s) 445, 472
MhlI GDGCHC 1 cut(s) 285
MluCI AATT 2 cut(s) 264, 621
MlyI GAGTC 1 cut(s) 279
MmeI TCCRAC 1 cut(s) 558
MnlI CCTC 6 cut(s) 27, 162, 176, 179, 210, 364
MseI TTAA 3 cut(s) 440, 464, 492
MspA1I CMGCKG 1 cut(s) 254
MspI CCGG 1 cut(s) 419
MspR9I CCNGG 1 cut(s) 420
MunI CAATTG 1 cut(s) 621
MvnI CGCG 1 cut(s) 162
NciI CCSGG 1 cut(s) 420
NdeI CATATG 2 cut(s) 135, 223
NdeII GATC 4 cut(s) 103, 445, 472, 601
NlaIII CATG 5 cut(s) 23, 112, 316, 490, 505
NlaIV GGNNCC 2 cut(s) 417, 628
NmuCI GTSAC 2 cut(s) 205, 481
NspV TTCGAA 1 cut(s) 288
PciSI GCTCTTC 1 cut(s) 290
PfeI GAWTC 1 cut(s) 92
PfoI TCCNGGA 1 cut(s) 418
PkrI GCNGC 3 cut(s) 164, 256, 301
PleI GAGTC 1 cut(s) 278
PpsI GAGTC 1 cut(s) 278
Psp1406I AACGTT 1 cut(s) 519
PspN4I GGNNCC 2 cut(s) 417, 628
PspPI GGNCC 2 cut(s) 340, 626
PstNI CAGNNNCTG 1 cut(s) 95
PsuI RGATCY 2 cut(s) 445, 472
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 1 cut(s) 357
RsaNI GTAC 1 cut(s) 356
SapI GCTCTTC 1 cut(s) 290
SaqAI TTAA 3 cut(s) 440, 464, 492
SatI GCNGC 3 cut(s) 163, 255, 300
Sau3AI GATC 4 cut(s) 103, 445, 472, 601
Sau96I GGNCC 2 cut(s) 340, 626
SchI GAGTC 1 cut(s) 279
ScrFI CCNGG 1 cut(s) 420
SduI GDGCHC 1 cut(s) 285
SetI ASST 5 cut(s) 40, 116, 256, 458, 522
SfaNI GCATC 3 cut(s) 311, 547, 571
SfcI CTRYAG 1 cut(s) 468
SfuI TTCGAA 1 cut(s) 288
SinI GGWCC 2 cut(s) 340, 626
SmlI CTYRAG 1 cut(s) 258
SmoI CTYRAG 1 cut(s) 258
Sse9I AATT 2 cut(s) 264, 621
SsiI CCGC 1 cut(s) 162
SspMI CTAG 1 cut(s) 203
StyD4I CCNGG 1 cut(s) 418
TaaI ACNGT 2 cut(s) 327, 511
TaiI ACGT 1 cut(s) 522
TaqI TCGA 1 cut(s) 288
TasI AATT 2 cut(s) 264, 621
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 1 cut(s) 92
Tru1I TTAA 3 cut(s) 440, 464, 492
Tru9I TTAA 3 cut(s) 440, 464, 492
TscAI CASTG 1 cut(s) 516
TseFI GTSAC 2 cut(s) 205, 481
TseI GCWGC 2 cut(s) 254, 299
Tsp45I GTSAC 2 cut(s) 205, 481
TspDTI ATGAA 5 cut(s) 152, 210, 301, 440, 490
TspRI CASTG 1 cut(s) 516
VpaK11BI GGWCC 2 cut(s) 340, 626
XspI CTAG 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.