RchiOBHm_Chr2g0154061

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000097
Physical Location & Seq
Forward (+)
71319674 .. 71321953
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52312

Sequence Viewer

Length: 1458 bp
ATGGATTCCAAGGGATTTGTAGCTGGTAAGCCTCATGCTGTTTGTGTTCCAGTTCCAGCACAGGGCCACATAAAGGCTATGCTCAAACTAGCAAAGCTCCTCCACCATAGGGGTTTCCACATAACCTTTGTCAACACAGAGTTCAACCACAAAAGGTTTCTTAGATCTCTAGGACCCAACTCCCTCGACGGCTTGCCCGATTTTCGATTCGAGGCCATCCCCGATGGCATTCCTGCAGGTTCGGATGAAGATGCCACCCAAGACGTCACTTTGGTTTCTGATGCCCTGTTGAAAGATCTATTACTGGCTCCTTTTCGAGACCTCCTCTTGAAGCTCAACGGCGAAGATGGTAGTACTCCGGTGAGCTGCGTAGTTTCAGATGGTTTCATGCCGTTCGCCATCACAGCTGCTGAAGAACTTGGAGTGCCTAGAGTAGCCTTCTTCACTATTGCTGCTTGCAGCTTTATGGCATATAAACAATATCCCACTTTAGTGGAAAAAGGACTTGCACCCCTCAAAGATGAGAGCTGTTTGACAAATGGGTTTTTGGACAAGGTATTAGATTGGATTCCAGGCATCAAAGATATCCGTTTACGAGATTTACCCGCCAACTTCCGAACTACGAACCCCGATGACATCCTCTTTAACTTCACCATGGAATCAATGCATAGAGCTGATAAGGCTACGGCAATAATTCTTCACACTTTTGATGCTTTGGAGCCTCATGTTCTGGAGGCGCTCTCATCTATGCTTAAGCTCCCACCTGTTTATGCAATTGGGCCTCAACAATTACACCTCAATCAATTACCAGAAGACACTTTAAAAGATATGGGAGATAGTCTATGGAAAGAAGAAACTGGGTGTCTAGAATGGCTCGATTCTAAGGAACAGAACTCAGTTATTTATGTCAGTTTTGGAAGTATAGCGGTAATGTCTCCACAACATCTTGTAGAGTTTGGTTGGGGACTTGCAAATAGTAAAGTTCCCTTCTTCTGGGTAATTAGGCCCGATTTGGTTGTTGGTGAGTCCGCGATTTTACCACCGGAGTTTGTAGCTGAAACCAAGGAAAGAGGTCTAATCGTAAGTTGGTGTCCGCAAGAGCAAGTGCTTAACCACCCATCAGTTGGAGGGTTTTTGACACACAGCGGTTGGGGTTCGACTATTGAGAGTTTGTGTGCAGGTGTGCCTATGCTATGTTGGCCATTCTTTTCTGACCAGCTAACAAATTGTTGGTATGCTTGTAATGAATGGGGCATTGGCATGGAGATTAGTAATGATGTAAAGAGACATGAAGTTGAAAAGCTTGTTAGAGAGTTAATGGGGGGAGAGAAGGGTGAGAAAATGAAAAAAAAGGTCTTGGAATGGAAGAAACTTGCGGAACAAGCTACTGCTCCACATGGTTCATCATCCATAAACTTTGACAATTTAGTGCACCAAATGTTGTCAAAGAAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

485

Amino Acids

53.87

Weight (kDa)

5.54

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 290 - 443 1.9e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1169
AatII GACGTC 1 cut(s) 267
Acc36I ACCTGC 2 cut(s) 227, 1169
AccB7I CCANNNNNTGG 1 cut(s) 1124
AccII CGCG 1 cut(s) 1031
AciI CCGC 6 cut(s) 606, 926, 1029, 1094, 1146, 1376
AcoI YGGCCR 1 cut(s) 1199
AcuI CTGAAG 1 cut(s) 432
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 1 cut(s) 355
AfiI CCNNNNNNNGG 5 cut(s) 62, 73, 109, 993, 1124
AflII CTTAAG 1 cut(s) 752
AgsI TTSAA 4 cut(s) 145, 292, 331, 1298
AjnI CCWGG 1 cut(s) 571
AjuI GAANNNNNNNTTGG 2 cut(s) 1239, 1271
AleI CACNNNNGTG 1 cut(s) 491
Alw21I GWGCWC 1 cut(s) 1434
Alw26I GTCTC 3 cut(s) 312, 939, 1279
Alw44I GTGCAC 1 cut(s) 1430
AlwNI CAGNNNCTG 1 cut(s) 410
AoxI GGCC 5 cut(s) 64, 213, 779, 1004, 1199
ApaLI GTGCAC 1 cut(s) 1430
ApeKI GCWGC 4 cut(s) 366, 407, 452, 459
AspLEI GCGC 1 cut(s) 739
AspS9I GGNCC 4 cut(s) 64, 173, 779, 1005
AsuHPI GGTGA 4 cut(s) 373, 643, 1034, 1346
AvaII GGWCC 1 cut(s) 173
BaeGI GKGCMC 1 cut(s) 1434
BalI TGGCCA 1 cut(s) 1201
BbsI GAAGAC 1 cut(s) 819
Bbv12I GWGCWC 1 cut(s) 1434
BbvI GCAGC 4 cut(s) 353, 394, 439, 471
BccI CCATC 6 cut(s) 218, 224, 341, 374, 407, 1126
BceAI ACGGC 4 cut(s) 205, 355, 376, 702
BciT130I CCWGG 1 cut(s) 573
BcoDI GTCTC 3 cut(s) 312, 939, 1279
BfaI CTAG 4 cut(s) 89, 170, 429, 866
BfmI CTRYAG 1 cut(s) 234
BfoI RGCGCY 1 cut(s) 740
BfrI CTTAAG 1 cut(s) 752
BfuAI ACCTGC 2 cut(s) 227, 1169
BglII AGATCT 2 cut(s) 164, 295
BisI GCNGC 4 cut(s) 367, 408, 453, 460
BlsI GCNGC 4 cut(s) 368, 409, 454, 461
BmcAI AGTACT 1 cut(s) 355
Bme1390I CCNGG 1 cut(s) 573
Bme18I GGWCC 1 cut(s) 173
BmgT120I GGNCC 4 cut(s) 64, 173, 779, 1005
BmiI GGNNCC 3 cut(s) 175, 309, 720
BmrFI CCNGG 1 cut(s) 573
BmrI ACTGGG 1 cut(s) 867
BmsI GCATC 4 cut(s) 241, 271, 585, 700
BmuI ACTGGG 1 cut(s) 867
BpiI GAAGAC 1 cut(s) 819
BplI GAGNNNNNCTC 4 cut(s) 309, 341, 725, 757
BpmI CTGGAG 1 cut(s) 752
BsaHI GRCGYC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 312
BsaJI CCNNGG 3 cut(s) 9, 654, 1062
BsaWI WCCGGW 2 cut(s) 358, 1042
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 73, 109, 993, 1124
Bse1I ACTGG 3 cut(s) 50, 309, 862
BseBI CCWGG 1 cut(s) 573
BseDI CCNNGG 3 cut(s) 9, 654, 1062
BseGI GGATG 4 cut(s) 216, 250, 636, 1406
BseLI CCNNNNNNNGG 5 cut(s) 62, 73, 109, 993, 1124
BseMII CTCAG 1 cut(s) 909
BseNI ACTGG 3 cut(s) 50, 309, 862
BseRI GAGGAG 2 cut(s) 89, 314
BseSI GKGCMC 1 cut(s) 1434
BseXI GCAGC 4 cut(s) 353, 394, 439, 471
BsgI GTGCAG 1 cut(s) 1197
Bsh1236I CGCG 1 cut(s) 1031
BshFI GGCC 5 cut(s) 66, 215, 781, 1006, 1201
BsiHKAI GWGCWC 1 cut(s) 1434
BsiSI CCGG 2 cut(s) 359, 1043
BslFI GGGAC 1 cut(s) 978
BslI CCNNNNNNNGG 5 cut(s) 62, 73, 109, 993, 1124
BsmAI GTCTC 3 cut(s) 312, 939, 1279
BsmFI GGGAC 1 cut(s) 978
BsmI GAATGC 1 cut(s) 228
BsnI GGCC 5 cut(s) 66, 215, 781, 1006, 1201
Bso31I GGTCTC 1 cut(s) 312
Bsp1286I GDGCHC 1 cut(s) 1434
Bsp143I GATC 2 cut(s) 164, 295
Bsp19I CCATGG 1 cut(s) 654
BspACI CCGC 6 cut(s) 606, 926, 1029, 1094, 1146, 1376
BspANI GGCC 5 cut(s) 66, 215, 781, 1006, 1201
BspCNI CTCAG 1 cut(s) 908
BspFNI CGCG 1 cut(s) 1031
BspLI GGNNCC 3 cut(s) 175, 309, 720
BspMAI CTGCAG 1 cut(s) 238
BspMI ACCTGC 2 cut(s) 227, 1169
BspTI CTTAAG 1 cut(s) 752
BspTNI GGTCTC 1 cut(s) 312
BsrI ACTGG 3 cut(s) 50, 309, 862
BssECI CCNNGG 3 cut(s) 9, 654, 1062
BssMI GATC 2 cut(s) 164, 295
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 3 cut(s) 9, 654, 1062
Bst2UI CCWGG 1 cut(s) 573
BstACI GRCGYC 1 cut(s) 264
BstAFI CTTAAG 1 cut(s) 752
BstC8I GCNNGC 2 cut(s) 194, 457
BstDEI CTNAG 3 cut(s) 161, 882, 895
BstDSI CCRYGG 1 cut(s) 654
BstF5I GGATG 4 cut(s) 216, 250, 636, 1406
BstFNI CGCG 1 cut(s) 1031
BstH2I RGCGCY 1 cut(s) 740
BstHHI GCGC 1 cut(s) 739
BstKTI GATC 2 cut(s) 167, 298
BstMAI GTCTC 3 cut(s) 312, 939, 1279
BstMBI GATC 2 cut(s) 164, 295
BstMWI GCNNNNNNNGC 4 cut(s) 404, 680, 1198, 1382
BstNI CCWGG 1 cut(s) 573
BstSCI CCNGG 1 cut(s) 571
BstSFI CTRYAG 1 cut(s) 234
BstSLI GKGCMC 1 cut(s) 1434
BstUI CGCG 1 cut(s) 1031
BstV1I GCAGC 4 cut(s) 353, 394, 439, 471
BstV2I GAAGAC 1 cut(s) 819
BstX2I RGATCY 2 cut(s) 164, 295
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 2 cut(s) 164, 295
BsuRI GGCC 5 cut(s) 66, 215, 781, 1006, 1201
BtgI CCRYGG 1 cut(s) 654
BtsCI GGATG 4 cut(s) 216, 250, 636, 1406
BveI ACCTGC 2 cut(s) 227, 1169
Cac8I GCNNGC 2 cut(s) 194, 457
CaiI CAGNNNCTG 1 cut(s) 410
CfoI GCGC 1 cut(s) 739
Cfr13I GGNCC 4 cut(s) 64, 173, 779, 1005
Csp6I GTAC 1 cut(s) 354
CviAII CATG 7 cut(s) 35, 388, 655, 725, 1261, 1289, 1397
CviQI GTAC 1 cut(s) 354
DdeI CTNAG 3 cut(s) 161, 882, 895
DpnI GATC 2 cut(s) 166, 297
DpnII GATC 2 cut(s) 164, 295
DraI TTTAAA 1 cut(s) 822
EaeI YGGCCR 1 cut(s) 1199
Eco130I CCWWGG 3 cut(s) 9, 654, 1062
Eco31I GGTCTC 1 cut(s) 312
Eco32I GATATC 1 cut(s) 586
Eco47I GGWCC 1 cut(s) 173
Eco57I CTGAAG 1 cut(s) 432
EcoO109I RGGNCCY 1 cut(s) 173
EcoRII CCWGG 1 cut(s) 571
EcoRV GATATC 1 cut(s) 586
EcoT14I CCWWGG 3 cut(s) 9, 654, 1062
EcoT22I ATGCAT 1 cut(s) 669
ErhI CCWWGG 3 cut(s) 9, 654, 1062
FaeI CATG 7 cut(s) 38, 391, 658, 728, 1264, 1292, 1400
FaqI GGGAC 1 cut(s) 978
FatI CATG 7 cut(s) 34, 387, 654, 724, 1260, 1288, 1396
FauI CCCGC 1 cut(s) 613
Fnu4HI GCNGC 4 cut(s) 367, 408, 453, 460
FokI GGATG 4 cut(s) 203, 257, 623, 1393
Fsp4HI GCNGC 4 cut(s) 367, 408, 453, 460
FspBI CTAG 4 cut(s) 89, 170, 429, 866
GlaI GCGC 1 cut(s) 738
GluI GCNGC 4 cut(s) 367, 408, 453, 460
GsuI CTGGAG 1 cut(s) 752
HaeII RGCGCY 1 cut(s) 740
HaeIII GGCC 5 cut(s) 66, 215, 781, 1006, 1201
HapII CCGG 2 cut(s) 359, 1043
HhaI GCGC 1 cut(s) 739
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 7 cut(s) 38, 391, 658, 728, 1264, 1292, 1400
Hin6I GCGC 1 cut(s) 737
HinP1I GCGC 1 cut(s) 737
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 1 cut(s) 1301
HinfI GANTC 6 cut(s) 5, 207, 568, 659, 878, 1025
HpaII CCGG 2 cut(s) 359, 1043
HphI GGTGA 4 cut(s) 373, 643, 1034, 1346
Hpy166II GTNNAC 3 cut(s) 133, 593, 1432
Hpy188I TCNGA 5 cut(s) 244, 280, 379, 617, 1213
Hpy188III TCNNGA 4 cut(s) 317, 328, 731, 866
Hpy8I GTNNAC 3 cut(s) 133, 593, 1432
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 3 cut(s) 448, 997, 1324
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 8 cut(s) 236, 459, 509, 667, 773, 971, 1178, 1432
HpyF10VI GCNNNNNNNGC 4 cut(s) 404, 680, 1198, 1382
HpyF3I CTNAG 3 cut(s) 161, 882, 895
HpySE526I ACGT 1 cut(s) 264
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 7 cut(s) 38, 391, 658, 728, 1264, 1292, 1400
HspAI GCGC 1 cut(s) 737
Kzo9I GATC 2 cut(s) 164, 295
LmnI GCTCC 5 cut(s) 102, 313, 718, 762, 1396
Lsp1109I GCAGC 4 cut(s) 353, 394, 439, 471
LweI GCATC 4 cut(s) 241, 271, 585, 700
MaeI CTAG 4 cut(s) 89, 170, 429, 866
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 1 cut(s) 265
MalI GATC 2 cut(s) 166, 297
MboI GATC 2 cut(s) 164, 295
MboII GAAGA 9 cut(s) 260, 356, 425, 433, 689, 824, 863, 982, 1378
MfeI CAATTG 1 cut(s) 774
MflI RGATCY 2 cut(s) 164, 295
MhlI GDGCHC 1 cut(s) 1434
MlsI TGGCCA 1 cut(s) 1201
MluCI AATT 7 cut(s) 693, 774, 788, 803, 999, 1225, 1423
MluNI TGGCCA 1 cut(s) 1201
MlyI GAGTC 1 cut(s) 1034
MmeI TCCRAC 1 cut(s) 1105
Mox20I TGGCCA 1 cut(s) 1201
Mph1103I ATGCAT 1 cut(s) 669
MscI TGGCCA 1 cut(s) 1201
MseI TTAA 5 cut(s) 645, 753, 821, 1110, 1316
MslI CAYNNNNRTG 2 cut(s) 491, 1259
Msp20I TGGCCA 1 cut(s) 1201
MspA1I CMGCKG 2 cut(s) 407, 1146
MspCI CTTAAG 1 cut(s) 752
MspI CCGG 2 cut(s) 359, 1043
MspR9I CCNGG 1 cut(s) 573
MunI CAATTG 1 cut(s) 774
Mva1269I GAATGC 1 cut(s) 228
MvaI CCWGG 1 cut(s) 573
MvnI CGCG 1 cut(s) 1031
MwoI GCNNNNNNNGC 4 cut(s) 404, 680, 1198, 1382
NcoI CCATGG 1 cut(s) 654
NdeII GATC 2 cut(s) 164, 295
NlaIII CATG 7 cut(s) 38, 391, 658, 728, 1264, 1292, 1400
NlaIV GGNNCC 3 cut(s) 175, 309, 720
NmuCI GTSAC 1 cut(s) 265
NsiI ATGCAT 1 cut(s) 669
OliI CACNNNNGTG 1 cut(s) 491
PaqCI CACCTGC 1 cut(s) 1169
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PctI GAATGC 1 cut(s) 228
PfeI GAWTC 5 cut(s) 5, 207, 568, 659, 878
PflMI CCANNNNNTGG 1 cut(s) 1124
PkrI GCNGC 4 cut(s) 368, 409, 454, 461
PleI GAGTC 1 cut(s) 1033
PpsI GAGTC 1 cut(s) 1033
PpuMI RGGWCCY 1 cut(s) 173
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 1 cut(s) 571
PspGI CCWGG 1 cut(s) 571
PspN4I GGNNCC 3 cut(s) 175, 309, 720
PspPI GGNCC 4 cut(s) 64, 173, 779, 1005
PspPPI RGGWCCY 1 cut(s) 173
PstI CTGCAG 1 cut(s) 238
PstNI CAGNNNCTG 1 cut(s) 410
PsuI RGATCY 2 cut(s) 164, 295
PvuII CAGCTG 1 cut(s) 407
RsaI GTAC 1 cut(s) 355
RsaNI GTAC 1 cut(s) 354
RseI CAYNNNNRTG 2 cut(s) 491, 1259
SaqAI TTAA 5 cut(s) 645, 753, 821, 1110, 1316
SatI GCNGC 4 cut(s) 367, 408, 453, 460
Sau3AI GATC 2 cut(s) 164, 295
Sau96I GGNCC 4 cut(s) 64, 173, 779, 1005
SbfI CCTGCAGG 1 cut(s) 238
ScaI AGTACT 1 cut(s) 355
SchI GAGTC 1 cut(s) 1034
ScrFI CCNGG 1 cut(s) 573
SdaI CCTGCAGG 1 cut(s) 238
SduI GDGCHC 1 cut(s) 1434
SfaNI GCATC 4 cut(s) 241, 271, 585, 700
SfcI CTRYAG 1 cut(s) 234
SinI GGWCC 1 cut(s) 173
SmiMI CAYNNNNRTG 2 cut(s) 491, 1259
SmlI CTYRAG 1 cut(s) 752
SmoI CTYRAG 1 cut(s) 752
Sse8387I CCTGCAGG 1 cut(s) 238
Sse9I AATT 7 cut(s) 693, 774, 788, 803, 999, 1225, 1423
SsiI CCGC 6 cut(s) 606, 926, 1029, 1094, 1146, 1376
SspMI CTAG 4 cut(s) 89, 170, 429, 866
StyD4I CCNGG 1 cut(s) 571
StyI CCWWGG 3 cut(s) 9, 654, 1062
TaiI ACGT 1 cut(s) 267
TaqI TCGA 6 cut(s) 186, 205, 210, 316, 876, 1157
TasI AATT 7 cut(s) 693, 774, 788, 803, 999, 1225, 1423
TatI WGTACW 1 cut(s) 353
TfiI GAWTC 5 cut(s) 5, 207, 568, 659, 878
Tru1I TTAA 5 cut(s) 645, 753, 821, 1110, 1316
Tru9I TTAA 5 cut(s) 645, 753, 821, 1110, 1316
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 4 cut(s) 366, 407, 452, 459
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 6 cut(s) 261, 376, 1260, 1305, 1358, 1392
TspGWI ACGGA 1 cut(s) 578
Van91I CCANNNNNTGG 1 cut(s) 1124
Vha464I CTTAAG 1 cut(s) 752
VneI GTGCAC 1 cut(s) 1430
VpaK11BI GGWCC 1 cut(s) 173
XbaI TCTAGA 1 cut(s) 865
XcmI CCANNNNNNNNNTGG 1 cut(s) 1121
XspI CTAG 4 cut(s) 89, 170, 429, 866
ZraI GACGTC 1 cut(s) 265
ZrmI AGTACT 1 cut(s) 355
Zsp2I ATGCAT 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.