RLG00000020762

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000097
Physical Location & Seq
Forward (+)
68524052 .. 68527378
3327 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020762

Sequence Viewer

Length: 2166 bp
ATGGGTTCCATGGAAGTACCTGATAAGCCTCATGCTGTATGTATCCCATTCCCATATCAAGGCCACATAAAGCCACTCCTCAAGTTTGCCAAGCTGTTGCACCACAGAGGTTTTCGTATCACCTTTGTGAATACAGAGTACAACCACAGACGCTTTCTCAAATCTTTAGGCCCCAACACACTAGATGGCTTGACAGACTTCCATTTTGAAACCATCCCAGATGGATTACCACCTTCCGATTCAGATTCCACCCAAGACATCACAGCTATCTGCGATTCCATTAACAAAAACTTCTTGGCTCCATTTCGTGACCTCCTCACCAGACTCAACAGTAGCACTTTTCCTGTGAGCTGCATTGTCTCAGATGGTTTCATGAGCTTCTCTATTGATGGTGCTCAAGAACTTGGATTACCTATTGTATTGTTCTTTCCTGTCGCTGCAAATGGCTTCATGGGCTTCAAACATTACCGTGCTCTGGTTGAGAAGGGATTTACACCAATAAAAGATGAGAAATGTCTATCCAATGGGTACCTAGACACTGTCATTGACTGGATACCAGGAATGAAAGATATCCGCCTAAAGGATCTTCCCAGCTTTTTCCGAACTACAGATCCCAACGACAGTCCATTTATACTAACAGGTGAAGCAACTGAAAGAGCACATAAAGCTTCAGCAGTTGTAATTCATACTTTTGATGCGTTGGAGAGAGATGTTTTGGATGCTTTATCATTTATGCTTCCACATGTTTATGTCATTGGTCCTCTTCAGTTACTTCTTTACCAGATACCAGAAGACCCTTTAAAGTCTATGGGATACAGCCTATGGAAGGAAGACACAGAGTGCCTCCCATGGCTAAATGCTAAGGCGCCAAACTCTGTTGTTTATGTGAATTTTGGCAGCGTAGTGGTCATGACACCAGAACATCTTGTGGAGTTTGGTTGGGGACTTGCAAATAGCAAGCACCCTTTTCTATGGGTAATTAGGCCTGATCTGGTTGTTGGCGAATCAGCGATTTTGCCACCTGAGTTTGTAGCTGAGACCAAGGAGAGAGGTATAATAGCAAGTTGGTGCCCACAGGAGGAAGTCCTTAACCACCCATCAGTTGGCGGGTTTTTAACACACAATGGGTGGAATTCGACCATTGAGAGTGTCACTGCAGGAGTTCCTATGCTGTGTTGGCCATACTTTGCAGAGCAGCAAACCAATTGTTGGTATGTTTGTAATGGATTGGGCATTGGCATGGAGATTGATAACAATGTCAAGAGGGATGAAGTCGAGAAGATTGTGAGGGAGTTAATGGAGGGACAGAAGGGTGAGACCATGAGGAACAAGGCTAATGTGTTGAAGAAATTAGCAAAAGAGGCCACTGATCCACAAGGCTCCTCGTACACAAACTTGGACAAAGTGTTTGAGGCCATCCCAGATGGCTTACCACCTAATTCAGATTCAGATTCCATACAAGACATCACAGCTAATGTTGATTCCATTGATAAGAACTTCCTGTCTCCATTTTGTAACATCGTCGACAAAATCAATCCTGATGCAGCAAATTCCCACAGCACTTCTCAAGTTCTCATACAACATGTCGTGGATGGTTTCACAAGCTTCTCCATCACAGCAGCTGAAGAACTTGGAATTCCTATTGTTATGTTCTTCACAATAGCAGCCTGGGGATTCATGGGCATCAAACAATTCCGTTCTCTGCTGGAAAAAGATGAGAGATGTCTATCAGATGATCAAAAAGACGTTGTGTTTCAATGTGCCATGGAAGCAGCTGAAAGAGCACATAGATCTTCAGCAGTTGTTCTTTATACTTTTGATGCCTTGGAGCGAGATGTTTTGGAGGCTCTATCATGTATACTTCCCCATCTTTATGCAGTTGGCCGTCTCCAATTCCTTCTCAATCGAATTCCAGAAGACCCTTTGAAACCTTTGGGATATAGTCTATGGAAAGAGGAAACTGAGTGCCTCCAATGGCTCAAGTCCAAGGCACCAACACATGTAGTGGTCATGACACCACAACAGTTTGTGGAGTTTGGTTGGCGACTTGCAAATTCCAAGCTTCCCTTCTTGTGGATTATTAGGCGTGACCTGATTGTTGGAGAATCGGCGATTTTGCCACCCACATTCGTGGCTGAAAGTCTGAAGCAATGGAAAGAGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

722

Amino Acids

80.91

Weight (kDa)

5.17

Isoelectric Point (pI)

37.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 135 4.7e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 284 - 441 1.6e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 528
AccB1I GGYRCC 4 cut(s) 528, 865, 1068, 1990
AccB7I CCANNNNNTGG 2 cut(s) 1103, 1209
AccI GTMKAC 2 cut(s) 1524, 1858
AciI CCGC 2 cut(s) 574, 1107
AclWI GGATC 3 cut(s) 591, 605, 1364
AcoI YGGCCR 2 cut(s) 1178, 1882
AcsI RAATTY 6 cut(s) 889, 1132, 1549, 1635, 1908, 2053
AcuI CTGAAG 5 cut(s) 654, 749, 1644, 1779, 2165
AcyI GRCGYC 1 cut(s) 866
AdeI CACNNNGTG 1 cut(s) 840
AfaI GTAC 4 cut(s) 18, 140, 530, 1388
AfiI CCNNNNNNNGG 8 cut(s) 59, 475, 580, 826, 1078, 1103, 1209, 2073
AflIII ACRYGT 3 cut(s) 742, 1582, 1999
AgsI TTSAA 5 cut(s) 209, 460, 1345, 1757, 1927
AjnI CCWGG 2 cut(s) 556, 1667
AjuI GAANNNNNNNTTGG 2 cut(s) 2051, 2083
AleI CACNNNNGTG 2 cut(s) 125, 2129
AloI GAACNNNNNNTCC 2 cut(s) 595, 627
Alw21I GWGCWC 4 cut(s) 397, 475, 661, 1786
Alw26I GTCTC 5 cut(s) 364, 1031, 1310, 1509, 1892
AlwI GGATC 3 cut(s) 591, 605, 1364
AlwNI CAGNNNCTG 1 cut(s) 1622
AoxI GGCC 7 cut(s) 61, 169, 983, 1178, 1362, 1413, 1882
ApeKI GCWGC 8 cut(s) 351, 437, 897, 1195, 1544, 1619, 1664, 1772
ApoI RAATTY 6 cut(s) 889, 1132, 1549, 1635, 1908, 2053
ArsI GACNNNNNNTTYG 4 cut(s) 188, 220, 1391, 1423
Asp718I GGTACC 1 cut(s) 528
AspLEI GCGC 1 cut(s) 868
AspS9I GGNCC 2 cut(s) 170, 758
AsuHPI GGTGA 4 cut(s) 112, 310, 653, 1325
AvaII GGWCC 1 cut(s) 758
BaeGI GKGCMC 1 cut(s) 1073
BalI TGGCCA 1 cut(s) 1180
BanI GGYRCC 4 cut(s) 528, 865, 1068, 1990
BbsI GAAGAC 3 cut(s) 798, 837, 1923
Bbv12I GWGCWC 4 cut(s) 397, 475, 661, 1786
BbvI GCAGC 8 cut(s) 338, 424, 909, 1207, 1556, 1631, 1676, 1784
BceAI ACGGC 1 cut(s) 1869
BciT130I CCWGG 2 cut(s) 558, 1669
BciVI GTATCC 3 cut(s) 53, 546, 806
BclI TGATCA 1 cut(s) 1735
BcoDI GTCTC 5 cut(s) 364, 1031, 1310, 1509, 1892
BfaI CTAG 2 cut(s) 182, 533
BfmI CTRYAG 2 cut(s) 606, 1155
BfoI RGCGCY 1 cut(s) 869
BfuI GTATCC 3 cut(s) 53, 546, 806
BglII AGATCT 1 cut(s) 1790
BisI GCNGC 8 cut(s) 352, 438, 898, 1196, 1545, 1620, 1665, 1773
BlsI GCNGC 8 cut(s) 353, 439, 899, 1197, 1546, 1621, 1666, 1774
Bme1390I CCNGG 2 cut(s) 558, 1669
Bme18I GGWCC 1 cut(s) 758
BmgT120I GGNCC 2 cut(s) 170, 758
BmiI GGNNCC 8 cut(s) 7, 172, 300, 530, 867, 1070, 1381, 1992
BmrFI CCNGG 2 cut(s) 558, 1669
BmsI GCATC 5 cut(s) 685, 709, 1531, 1692, 1810
BpiI GAAGAC 3 cut(s) 798, 837, 1923
Bpu10I CCTNAGC 1 cut(s) 861
BpuEI CTTGAG 4 cut(s) 65, 381, 1551, 1964
BsaBI GATNNNNATC 1 cut(s) 1726
BsaHI GRCGYC 1 cut(s) 866
BsaI GGTCTC 2 cut(s) 1031, 1310
BsaJI CCNNGG 7 cut(s) 9, 848, 1041, 1668, 1764, 1824, 1986
Bsc4I CCNNNNNNNGG 8 cut(s) 59, 475, 580, 826, 1078, 1103, 1209, 2073
Bse1I ACTGG 1 cut(s) 554
Bse3DI GCAATG 1 cut(s) 2156
Bse8I GATNNNNATC 1 cut(s) 1726
BseBI CCWGG 2 cut(s) 558, 1669
BseDI CCNNGG 7 cut(s) 9, 848, 1041, 1668, 1764, 1824, 1986
BseGI GGATG 5 cut(s) 213, 724, 1273, 1416, 1597
BseJI GATNNNNATC 1 cut(s) 1726
BseLI CCNNNNNNNGG 8 cut(s) 59, 475, 580, 826, 1078, 1103, 1209, 2073
BseMI GCAATG 1 cut(s) 2156
BseMII CTCAG 4 cut(s) 375, 1014, 1026, 1953
BseNI ACTGG 1 cut(s) 554
BseRI GAGGAG 3 cut(s) 68, 305, 1372
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 8 cut(s) 338, 424, 909, 1207, 1556, 1631, 1676, 1784
BseYI CCCAGC 1 cut(s) 590
BshFI GGCC 7 cut(s) 63, 171, 985, 1180, 1364, 1415, 1884
BshNI GGYRCC 4 cut(s) 528, 865, 1068, 1990
BsiHKAI GWGCWC 4 cut(s) 397, 475, 661, 1786
BslFI GGGAC 2 cut(s) 957, 1317
BslI CCNNNNNNNGG 8 cut(s) 59, 475, 580, 826, 1078, 1103, 1209, 2073
BsmAI GTCTC 5 cut(s) 364, 1031, 1310, 1509, 1892
BsmBI CGTCTC 1 cut(s) 1892
BsmFI GGGAC 2 cut(s) 957, 1317
BsnI GGCC 7 cut(s) 63, 171, 985, 1180, 1364, 1415, 1884
Bso31I GGTCTC 2 cut(s) 1031, 1310
Bsp1286I GDGCHC 5 cut(s) 397, 475, 661, 1073, 1786
Bsp143I GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
Bsp19I CCATGG 3 cut(s) 9, 848, 1764
BspACI CCGC 2 cut(s) 574, 1107
BspANI GGCC 7 cut(s) 63, 171, 985, 1180, 1364, 1415, 1884
BspCNI CTCAG 4 cut(s) 374, 1015, 1027, 1954
BspHI TCATGA 3 cut(s) 372, 909, 2010
BspLI GGNNCC 8 cut(s) 7, 172, 300, 530, 867, 1070, 1381, 1992
BspMAI CTGCAG 1 cut(s) 1159
BspPI GGATC 3 cut(s) 591, 605, 1364
BspT107I GGYRCC 4 cut(s) 528, 865, 1068, 1990
BspTNI GGTCTC 2 cut(s) 1031, 1310
BsrDI GCAATG 1 cut(s) 2156
BsrI ACTGG 1 cut(s) 554
BssECI CCNNGG 7 cut(s) 9, 848, 1041, 1668, 1764, 1824, 1986
BssMI GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
BssNAI GTATAC 1 cut(s) 1859
BssNI GRCGYC 1 cut(s) 866
BssT1I CCWWGG 6 cut(s) 9, 848, 1041, 1764, 1824, 1986
Bst1107I GTATAC 1 cut(s) 1859
Bst2UI CCWGG 2 cut(s) 558, 1669
Bst4CI ACNGT 5 cut(s) 332, 470, 541, 623, 2025
Bst6I CTCTTC 1 cut(s) 768
BstACI GRCGYC 1 cut(s) 866
BstC8I GCNNGC 1 cut(s) 959
BstDEI CTNAG 5 cut(s) 361, 861, 1023, 1035, 1962
BstDSI CCRYGG 3 cut(s) 9, 848, 1764
BstENI CCTNNNNNAGG 1 cut(s) 824
BstF5I GGATG 5 cut(s) 213, 724, 1273, 1416, 1597
BstH2I RGCGCY 1 cut(s) 869
BstHHI GCGC 1 cut(s) 868
BstKTI GATC 6 cut(s) 586, 613, 991, 1372, 1738, 1793
BstMAI GTCTC 5 cut(s) 364, 1031, 1310, 1509, 1892
BstMBI GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
BstMWI GCNNNNNNNGC 6 cut(s) 453, 665, 1177, 1361, 1769, 1781
BstNI CCWGG 2 cut(s) 558, 1669
BstNSI RCATGY 3 cut(s) 746, 1586, 2003
BstSCI CCNGG 2 cut(s) 556, 1667
BstSFI CTRYAG 2 cut(s) 606, 1155
BstSLI GKGCMC 1 cut(s) 1073
BstV1I GCAGC 8 cut(s) 338, 424, 909, 1207, 1556, 1631, 1676, 1784
BstV2I GAAGAC 3 cut(s) 798, 837, 1923
BstX2I RGATCY 3 cut(s) 583, 610, 1790
BstXI CCANNNNNNTGG 1 cut(s) 2131
BstYI RGATCY 3 cut(s) 583, 610, 1790
BstZ17I GTATAC 1 cut(s) 1859
BsuI GTATCC 3 cut(s) 53, 546, 806
BsuRI GGCC 7 cut(s) 63, 171, 985, 1180, 1364, 1415, 1884
BtgI CCRYGG 3 cut(s) 9, 848, 1764
BtsCI GGATG 5 cut(s) 213, 724, 1273, 1416, 1597
BtsI GCAGTG 1 cut(s) 1152
BtsIMutI CAGTG 3 cut(s) 537, 1152, 1365
Cac8I GCNNGC 1 cut(s) 959
CaiI CAGNNNCTG 1 cut(s) 1622
CciI TCATGA 3 cut(s) 372, 909, 2010
CfoI GCGC 1 cut(s) 868
Cfr13I GGNCC 2 cut(s) 170, 758
CseI GACGC 1 cut(s) 159
Csp6I GTAC 4 cut(s) 17, 139, 529, 1387
CviQI GTAC 4 cut(s) 17, 139, 529, 1387
DdeI CTNAG 5 cut(s) 361, 861, 1023, 1035, 1962
DinI GGCGCC 1 cut(s) 867
DpnI GATC 6 cut(s) 585, 612, 990, 1371, 1737, 1792
DpnII GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
DraI TTTAAA 1 cut(s) 801
DraIII CACNNNGTG 1 cut(s) 840
EaeI YGGCCR 2 cut(s) 1178, 1882
Eam1104I CTCTTC 1 cut(s) 768
EarI CTCTTC 1 cut(s) 768
EciI GGCGGA 1 cut(s) 563
Eco130I CCWWGG 6 cut(s) 9, 848, 1041, 1764, 1824, 1986
Eco147I AGGCCT 1 cut(s) 985
Eco31I GGTCTC 2 cut(s) 1031, 1310
Eco32I GATATC 1 cut(s) 571
Eco47I GGWCC 1 cut(s) 758
Eco57I CTGAAG 5 cut(s) 654, 749, 1644, 1779, 2165
EcoNI CCTNNNNNAGG 1 cut(s) 824
EcoO109I RGGNCCY 1 cut(s) 170
EcoRI GAATTC 3 cut(s) 1132, 1635, 1908
EcoRII CCWGG 2 cut(s) 556, 1667
EcoRV GATATC 1 cut(s) 571
EcoT14I CCWWGG 6 cut(s) 9, 848, 1041, 1764, 1824, 1986
EgeI GGCGCC 1 cut(s) 867
EheI GGCGCC 1 cut(s) 867
ErhI CCWWGG 6 cut(s) 9, 848, 1041, 1764, 1824, 1986
Esp3I CGTCTC 1 cut(s) 1892
FalI AAGNNNNNCTT 2 cut(s) 2051, 2083
FaqI GGGAC 2 cut(s) 957, 1317
FauI CCCGC 1 cut(s) 1100
FbaI TGATCA 1 cut(s) 1735
FblI GTMKAC 2 cut(s) 1524, 1858
Fnu4HI GCNGC 8 cut(s) 352, 438, 898, 1196, 1545, 1620, 1665, 1773
FokI GGATG 5 cut(s) 200, 731, 1280, 1403, 1604
Fsp4HI GCNGC 8 cut(s) 352, 438, 898, 1196, 1545, 1620, 1665, 1773
FspBI CTAG 2 cut(s) 182, 533
GlaI GCGC 1 cut(s) 867
GluI GCNGC 8 cut(s) 352, 438, 898, 1196, 1545, 1620, 1665, 1773
GsaI CCCAGC 1 cut(s) 594
HaeII RGCGCY 1 cut(s) 869
HaeIII GGCC 7 cut(s) 63, 171, 985, 1180, 1364, 1415, 1884
HgaI GACGC 1 cut(s) 159
HhaI GCGC 1 cut(s) 868
Hin1I GRCGYC 1 cut(s) 866
Hin6I GCGC 1 cut(s) 866
HinP1I GCGC 1 cut(s) 866
HincII GTYRAC 1 cut(s) 1525
HindII GTYRAC 1 cut(s) 1525
HindIII AAGCTT 3 cut(s) 666, 1603, 2060
HphI GGTGA 4 cut(s) 112, 310, 653, 1325
Hpy166II GTNNAC 3 cut(s) 1389, 1525, 1859
Hpy188I TCNGA 8 cut(s) 238, 244, 364, 602, 1444, 1450, 1732, 2145
Hpy188III TCNNGA 9 cut(s) 308, 373, 398, 910, 1261, 1276, 1538, 1913, 2011
Hpy8I GTNNAC 3 cut(s) 1389, 1525, 1859
Hpy99I CGWCG 1 cut(s) 1526
HpyAV CCTTC 6 cut(s) 243, 478, 820, 1303, 1907, 2077
HpyCH4III ACNGT 5 cut(s) 332, 470, 541, 623, 2025
HpyCH4IV ACGT 1 cut(s) 1746
HpyCH4V TGCA 9 cut(s) 100, 354, 440, 950, 1157, 1190, 1544, 1877, 2051
HpyF10VI GCNNNNNNNGC 6 cut(s) 453, 665, 1177, 1361, 1769, 1781
HpyF3I CTNAG 5 cut(s) 361, 861, 1023, 1035, 1962
HpySE526I ACGT 1 cut(s) 1746
Hsp92I GRCGYC 1 cut(s) 866
HspAI GCGC 1 cut(s) 866
KasI GGCGCC 1 cut(s) 865
KpnI GGTACC 1 cut(s) 532
Ksp22I TGATCA 1 cut(s) 1735
Kzo9I GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
LmnI GCTCC 3 cut(s) 304, 1385, 1828
Lsp1109I GCAGC 8 cut(s) 338, 424, 909, 1207, 1556, 1631, 1676, 1784
LweI GCATC 5 cut(s) 685, 709, 1531, 1692, 1810
MaeI CTAG 2 cut(s) 182, 533
MaeII ACGT 1 cut(s) 1746
MaeIII GTNAC 5 cut(s) 308, 768, 1150, 1514, 2087
MalI GATC 6 cut(s) 585, 612, 990, 1371, 1737, 1792
MboI GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
MfeI CAATTG 1 cut(s) 1204
MflI RGATCY 3 cut(s) 583, 610, 1790
MhlI GDGCHC 5 cut(s) 397, 475, 661, 1073, 1786
MlsI TGGCCA 1 cut(s) 1180
MluNI TGGCCA 1 cut(s) 1180
Mly113I GGCGCC 1 cut(s) 866
MlyI GAGTC 1 cut(s) 318
MmeI TCCRAC 2 cut(s) 681, 2080
Mox20I TGGCCA 1 cut(s) 1180
MscI TGGCCA 1 cut(s) 1180
MseI TTAA 5 cut(s) 282, 800, 1089, 1115, 1295
MslI CAYNNNNRTG 6 cut(s) 125, 468, 747, 1238, 1872, 2129
Msp20I TGGCCA 1 cut(s) 1180
MspA1I CMGCKG 2 cut(s) 1622, 1775
MspR9I CCNGG 2 cut(s) 558, 1669
MunI CAATTG 1 cut(s) 1204
MvaI CCWGG 2 cut(s) 558, 1669
MwoI GCNNNNNNNGC 6 cut(s) 453, 665, 1177, 1361, 1769, 1781
NarI GGCGCC 1 cut(s) 866
NcoI CCATGG 3 cut(s) 9, 848, 1764
NdeII GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
NlaIV GGNNCC 8 cut(s) 7, 172, 300, 530, 867, 1070, 1381, 1992
NmuCI GTSAC 3 cut(s) 308, 1150, 2087
NspI RCATGY 3 cut(s) 746, 1586, 2003
OliI CACNNNNGTG 2 cut(s) 125, 2129
PagI TCATGA 3 cut(s) 372, 909, 2010
PceI AGGCCT 1 cut(s) 985
PciI ACATGT 3 cut(s) 742, 1582, 1999
PfeI GAWTC 9 cut(s) 239, 245, 275, 1004, 1445, 1451, 1481, 1674, 2105
PflFI GACNNNGTC 1 cut(s) 539
PflMI CCANNNNNTGG 2 cut(s) 1103, 1209
PkrI GCNGC 8 cut(s) 353, 439, 899, 1197, 1546, 1621, 1666, 1774
PleI GAGTC 1 cut(s) 318
PluTI GGCGCC 1 cut(s) 869
PpsI GAGTC 1 cut(s) 318
PscI ACATGT 3 cut(s) 742, 1582, 1999
Psp6I CCWGG 2 cut(s) 556, 1667
PspFI CCCAGC 1 cut(s) 590
PspGI CCWGG 2 cut(s) 556, 1667
PspN4I GGNNCC 8 cut(s) 7, 172, 300, 530, 867, 1070, 1381, 1992
PspPI GGNCC 2 cut(s) 170, 758
PsrI GAACNNNNNNTAC 2 cut(s) 393, 425
PstI CTGCAG 1 cut(s) 1159
PstNI CAGNNNCTG 1 cut(s) 1622
PsuI RGATCY 3 cut(s) 583, 610, 1790
PsyI GACNNNGTC 1 cut(s) 539
PvuII CAGCTG 2 cut(s) 1622, 1775
RsaI GTAC 4 cut(s) 18, 140, 530, 1388
RsaNI GTAC 4 cut(s) 17, 139, 529, 1387
RseI CAYNNNNRTG 6 cut(s) 125, 468, 747, 1238, 1872, 2129
SalI GTCGAC 1 cut(s) 1523
SaqAI TTAA 5 cut(s) 282, 800, 1089, 1115, 1295
SatI GCNGC 8 cut(s) 352, 438, 898, 1196, 1545, 1620, 1665, 1773
Sau3AI GATC 6 cut(s) 583, 610, 988, 1369, 1735, 1790
Sau96I GGNCC 2 cut(s) 170, 758
SchI GAGTC 1 cut(s) 318
ScrFI CCNGG 2 cut(s) 558, 1669
SduI GDGCHC 5 cut(s) 397, 475, 661, 1073, 1786
SfaNI GCATC 5 cut(s) 685, 709, 1531, 1692, 1810
SfcI CTRYAG 2 cut(s) 606, 1155
SfoI GGCGCC 1 cut(s) 867
SinI GGWCC 1 cut(s) 758
SmiMI CAYNNNNRTG 6 cut(s) 125, 468, 747, 1238, 1872, 2129
SmlI CTYRAG 4 cut(s) 80, 396, 1566, 1979
SmoI CTYRAG 4 cut(s) 80, 396, 1566, 1979
SseBI AGGCCT 1 cut(s) 985
SsiI CCGC 2 cut(s) 574, 1107
SspDI GGCGCC 1 cut(s) 865
SspMI CTAG 2 cut(s) 182, 533
StuI AGGCCT 1 cut(s) 985
StyD4I CCNGG 2 cut(s) 556, 1667
StyI CCWWGG 6 cut(s) 9, 848, 1041, 1764, 1824, 1986
TaaI ACNGT 5 cut(s) 332, 470, 541, 623, 2025
TaiI ACGT 1 cut(s) 1749
TaqI TCGA 4 cut(s) 1136, 1275, 1524, 1906
TatI WGTACW 1 cut(s) 138
TfiI GAWTC 9 cut(s) 239, 245, 275, 1004, 1445, 1451, 1481, 1674, 2105
Tru1I TTAA 5 cut(s) 282, 800, 1089, 1115, 1295
Tru9I TTAA 5 cut(s) 282, 800, 1089, 1115, 1295
TscAI CASTG 3 cut(s) 544, 1159, 1372
TseFI GTSAC 3 cut(s) 308, 1150, 2087
TseI GCWGC 8 cut(s) 351, 437, 897, 1195, 1544, 1619, 1664, 1772
Tsp45I GTSAC 3 cut(s) 308, 1150, 2087
TspDTI ATGAA 6 cut(s) 361, 439, 578, 674, 1284, 1666
TspGWI ACGGA 1 cut(s) 1685
TspRI CASTG 3 cut(s) 544, 1159, 1372
Tth111I GACNNNGTC 1 cut(s) 539
Van91I CCANNNNNTGG 2 cut(s) 1103, 1209
VpaK11BI GGWCC 1 cut(s) 758
XagI CCTNNNNNAGG 1 cut(s) 824
XapI RAATTY 6 cut(s) 889, 1132, 1549, 1635, 1908, 2053
XceI RCATGY 3 cut(s) 746, 1586, 2003
XcmI CCANNNNNNNNNTGG 1 cut(s) 1100
XmiI GTMKAC 2 cut(s) 1524, 1858
XspI CTAG 2 cut(s) 182, 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.