Rh5BG203500

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
22976804 .. 22977607
804 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG203500.1

Sequence Viewer

Length: 804 bp
ATGGAAGCAGTCGAAAACGCAAATAAAGCTTCAGCTGTTGTTCTTCTCACATTTGATGCTTTGGAGAAAGAGGTTTTGGAAGCTCTCTCCTCATCTATTTCTCCACCTGTTTATACAATTGGTCCTCTCCAATTGCTTCTAAATCAAATACCGGAAGACCCTTTGAAGCCTCTGGGATACAGTCTTTGGAAGGAGGAAACAGACTGTCTCCAATGGCTAAACTGCAAAGCACCGAACTCAATTGTTTATGTCAATTTTGGCAGTGTTGCGGTTTTGACTCCGGAACAACTTCTTGAGTTTGGTTGGGGACTTGCAAATACCAAGCTCCCCTTCTTCTGGGTTATTAGGCCTGATTTGGTTGCTGGAAAATCGGCAATCCTGCCGCCAGAGTTTGAAGCTGAAACCAAAGACAGAGGTCTAATAGCAAGTTGGTGCCCTCAAGAAGAAATCCTAAACCATCCATCAGTTGGAGGGTTTTTAACACACTGCGGTTGGAATTCAACCATTGAGAGTGTTACAGCTGGAGTGCCGATGCTGTGTTGGCCATTCTTTTCAGATCAGCAAACAAACAGTTACTACAGTTGCAACGAATGGGGAATTGGCATGGAGATCAACACTGACGTCCAGAGAGACCATGTAGAGAAGATTGTCAAAGAATTAATGGAGGAAGACAAGGGTAAGAAGTTGAAAAACAGGGCATTGCAGTGGAAGAAACTAGCTGAAGAAGCCACTGCTCCGCATGGTTCTTCATCAAAAAACTTGGACAATTTGGTAAATCAAGTCCTATTAAGAAAGCGCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

267

Amino Acids

29.86

Weight (kDa)

4.99

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 12 - 227 1.1e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 624
AccB1I GGYRCC 1 cut(s) 432
AccB7I CCANNNNNTGG 1 cut(s) 467
AccIII TCCGGA 1 cut(s) 280
AciI CCGC 4 cut(s) 269, 383, 489, 737
AcoI YGGCCR 1 cut(s) 542
AcsI RAATTY 1 cut(s) 496
AcuI CTGAAG 2 cut(s) 15, 741
AcyI GRCGYC 1 cut(s) 621
AfiI CCNNNNNNNGG 2 cut(s) 336, 467
AgsI TTSAA 4 cut(s) 166, 395, 501, 688
AjuI GAANNNNNNNTTGG 6 cut(s) 59, 91, 314, 346, 582, 614
AluBI AGCT 7 cut(s) 29, 35, 83, 325, 398, 521, 719
AluI AGCT 7 cut(s) 29, 35, 83, 325, 398, 521, 719
Alw26I GTCTC 2 cut(s) 212, 624
Aor13HI TCCGGA 1 cut(s) 280
AoxI GGCC 2 cut(s) 347, 542
ApoI RAATTY 1 cut(s) 496
AseI ATTAAT 1 cut(s) 659
Asp700I GAANNNNTTC 1 cut(s) 288
AspLEI GCGC 1 cut(s) 798
AspS9I GGNCC 1 cut(s) 122
AvaII GGWCC 1 cut(s) 122
BaeGI GKGCMC 1 cut(s) 437
BalI TGGCCA 1 cut(s) 544
BanI GGYRCC 1 cut(s) 432
BbsI GAAGAC 2 cut(s) 162, 675
BccI CCATC 2 cut(s) 465, 469
BciVI GTATCC 1 cut(s) 170
BcoDI GTCTC 2 cut(s) 212, 624
BfaI CTAG 1 cut(s) 716
BfmI CTRYAG 1 cut(s) 577
BfuI GTATCC 1 cut(s) 170
BisI GCNGC 1 cut(s) 383
BlsI GCNGC 1 cut(s) 384
Bme18I GGWCC 1 cut(s) 122
BmgT120I GGNCC 1 cut(s) 122
BmiI GGNNCC 1 cut(s) 434
BmsI GCATC 2 cut(s) 46, 522
BoxI GACNNNNGTC 1 cut(s) 414
BpiI GAAGAC 2 cut(s) 162, 675
BpmI CTGGAG 1 cut(s) 543
BpuEI CTTGAG 2 cut(s) 314, 423
BsaHI GRCGYC 1 cut(s) 621
BsaI GGTCTC 1 cut(s) 624
BsaWI WCCGGW 2 cut(s) 151, 280
Bsc4I CCNNNNNNNGG 2 cut(s) 336, 467
Bse3DI GCAATG 1 cut(s) 698
BseAI TCCGGA 1 cut(s) 280
BseGI GGATG 1 cut(s) 457
BseLI CCNNNNNNNGG 2 cut(s) 336, 467
BseMI GCAATG 1 cut(s) 698
BseRI GAGGAG 1 cut(s) 79
BseSI GKGCMC 1 cut(s) 437
BshFI GGCC 2 cut(s) 349, 544
BshNI GGYRCC 1 cut(s) 432
BsiSI CCGG 2 cut(s) 152, 281
BslFI GGGAC 1 cut(s) 321
BslI CCNNNNNNNGG 2 cut(s) 336, 467
BsmAI GTCTC 2 cut(s) 212, 624
BsmFI GGGAC 1 cut(s) 321
BsnI GGCC 2 cut(s) 349, 544
Bso31I GGTCTC 1 cut(s) 624
Bsp1286I GDGCHC 1 cut(s) 437
Bsp13I TCCGGA 1 cut(s) 280
Bsp143I GATC 2 cut(s) 556, 609
BspACI CCGC 4 cut(s) 269, 383, 489, 737
BspANI GGCC 2 cut(s) 349, 544
BspEI TCCGGA 1 cut(s) 280
BspLI GGNNCC 1 cut(s) 434
BspT107I GGYRCC 1 cut(s) 432
BspTNI GGTCTC 1 cut(s) 624
BsrDI GCAATG 1 cut(s) 698
BssMI GATC 2 cut(s) 556, 609
BssNI GRCGYC 1 cut(s) 621
Bst4CI ACNGT 4 cut(s) 182, 206, 572, 581
BstACI GRCGYC 1 cut(s) 621
BstF5I GGATG 1 cut(s) 457
BstHHI GCGC 1 cut(s) 798
BstKTI GATC 2 cut(s) 559, 612
BstMAI GTCTC 2 cut(s) 212, 624
BstMBI GATC 2 cut(s) 556, 609
BstMWI GCNNNNNNNGC 3 cut(s) 26, 541, 725
BstPAI GACNNNNGTC 1 cut(s) 414
BstSFI CTRYAG 1 cut(s) 577
BstSLI GKGCMC 1 cut(s) 437
BstV2I GAAGAC 2 cut(s) 162, 675
BsuI GTATCC 1 cut(s) 170
BsuRI GGCC 2 cut(s) 349, 544
BtsCI GGATG 1 cut(s) 457
BtsI GCAGTG 4 cut(s) 268, 484, 710, 729
BtsIMutI CAGTG 5 cut(s) 268, 484, 615, 710, 729
CfoI GCGC 1 cut(s) 798
Cfr13I GGNCC 1 cut(s) 122
CviAII CATG 3 cut(s) 604, 635, 740
DpnI GATC 2 cut(s) 558, 611
DpnII GATC 2 cut(s) 556, 609
EaeI YGGCCR 1 cut(s) 542
Eco147I AGGCCT 1 cut(s) 349
Eco31I GGTCTC 1 cut(s) 624
Eco47I GGWCC 1 cut(s) 122
Eco57I CTGAAG 2 cut(s) 15, 741
EcoRI GAATTC 1 cut(s) 496
FaeI CATG 3 cut(s) 607, 638, 743
FaiI YATR 6 cut(s) 114, 249, 605, 636, 741, 802
FalI AAGNNNNNCTT 2 cut(s) 314, 346
FaqI GGGAC 1 cut(s) 321
FatI CATG 3 cut(s) 603, 634, 739
Fnu4HI GCNGC 1 cut(s) 383
FokI GGATG 1 cut(s) 444
Fsp4HI GCNGC 1 cut(s) 383
FspBI CTAG 1 cut(s) 716
GlaI GCGC 1 cut(s) 797
GluI GCNGC 1 cut(s) 383
GsuI CTGGAG 1 cut(s) 543
HaeIII GGCC 2 cut(s) 349, 544
HapII CCGG 2 cut(s) 152, 281
HhaI GCGC 1 cut(s) 798
Hin1I GRCGYC 1 cut(s) 621
Hin1II CATG 3 cut(s) 607, 638, 743
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HindIII AAGCTT 1 cut(s) 27
HinfI GANTC 1 cut(s) 277
HpaII CCGG 2 cut(s) 152, 281
Hpy188I TCNGA 1 cut(s) 556
Hpy188III TCNNGA 4 cut(s) 281, 293, 440, 625
HpyAV CCTTC 2 cut(s) 184, 340
HpyCH4III ACNGT 4 cut(s) 182, 206, 572, 581
HpyCH4IV ACGT 1 cut(s) 621
HpyCH4V TGCA 4 cut(s) 225, 314, 585, 703
HpyF10VI GCNNNNNNNGC 3 cut(s) 26, 541, 725
HpySE526I ACGT 1 cut(s) 621
Hsp92I GRCGYC 1 cut(s) 621
Hsp92II CATG 3 cut(s) 607, 638, 743
HspAI GCGC 1 cut(s) 796
Kpn2I TCCGGA 1 cut(s) 280
Kzo9I GATC 2 cut(s) 556, 609
LmnI GCTCC 2 cut(s) 330, 739
LweI GCATC 2 cut(s) 46, 522
MaeI CTAG 1 cut(s) 716
MaeII ACGT 1 cut(s) 621
MaeIII GTNAC 2 cut(s) 514, 572
MalI GATC 2 cut(s) 558, 611
MboI GATC 2 cut(s) 556, 609
MboII GAAGA 9 cut(s) 35, 167, 325, 455, 655, 680, 721, 734, 738
MfeI CAATTG 3 cut(s) 117, 131, 240
MhlI GDGCHC 1 cut(s) 437
MlsI TGGCCA 1 cut(s) 544
MluCI AATT 8 cut(s) 117, 131, 240, 253, 496, 597, 656, 766
MluNI TGGCCA 1 cut(s) 544
MlyI GAGTC 1 cut(s) 271
MmeI TCCRAC 2 cut(s) 448, 473
MnlI CCTC 9 cut(s) 64, 100, 135, 180, 187, 407, 447, 464, 658
Mox20I TGGCCA 1 cut(s) 544
MroI TCCGGA 1 cut(s) 280
MroXI GAANNNNTTC 1 cut(s) 288
MscI TGGCCA 1 cut(s) 544
MseI TTAA 3 cut(s) 479, 659, 788
MslI CAYNNNNRTG 1 cut(s) 703
Msp20I TGGCCA 1 cut(s) 544
MspA1I CMGCKG 2 cut(s) 35, 521
MspI CCGG 2 cut(s) 152, 281
MunI CAATTG 3 cut(s) 117, 131, 240
MwoI GCNNNNNNNGC 3 cut(s) 26, 541, 725
NdeII GATC 2 cut(s) 556, 609
NlaIII CATG 3 cut(s) 607, 638, 743
NlaIV GGNNCC 1 cut(s) 434
PceI AGGCCT 1 cut(s) 349
PdmI GAANNNNTTC 1 cut(s) 288
PflMI CCANNNNNTGG 1 cut(s) 467
PkrI GCNGC 1 cut(s) 384
PleI GAGTC 1 cut(s) 271
PpsI GAGTC 1 cut(s) 271
PshAI GACNNNNGTC 1 cut(s) 414
PshBI ATTAAT 1 cut(s) 659
PspN4I GGNNCC 1 cut(s) 434
PspPI GGNCC 1 cut(s) 122
PvuII CAGCTG 2 cut(s) 35, 521
RseI CAYNNNNRTG 1 cut(s) 703
SaqAI TTAA 3 cut(s) 479, 659, 788
SatI GCNGC 1 cut(s) 383
Sau3AI GATC 2 cut(s) 556, 609
Sau96I GGNCC 1 cut(s) 122
SchI GAGTC 1 cut(s) 271
SduI GDGCHC 1 cut(s) 437
SfaNI GCATC 2 cut(s) 46, 522
SfcI CTRYAG 1 cut(s) 577
SinI GGWCC 1 cut(s) 122
SmiMI CAYNNNNRTG 1 cut(s) 703
SmlI CTYRAG 2 cut(s) 293, 438
SmoI CTYRAG 2 cut(s) 293, 438
Sse9I AATT 8 cut(s) 117, 131, 240, 253, 496, 597, 656, 766
SseBI AGGCCT 1 cut(s) 349
SsiI CCGC 4 cut(s) 269, 383, 489, 737
SspMI CTAG 1 cut(s) 716
StuI AGGCCT 1 cut(s) 349
TaaI ACNGT 4 cut(s) 182, 206, 572, 581
TaiI ACGT 1 cut(s) 624
TaqI TCGA 1 cut(s) 12
TasI AATT 8 cut(s) 117, 131, 240, 253, 496, 597, 656, 766
TauI GCSGC 1 cut(s) 385
Tru1I TTAA 3 cut(s) 479, 659, 788
Tru9I TTAA 3 cut(s) 479, 659, 788
TscAI CASTG 5 cut(s) 268, 491, 622, 710, 736
TspDTI ATGAA 1 cut(s) 738
TspRI CASTG 5 cut(s) 268, 491, 622, 710, 736
Van91I CCANNNNNTGG 1 cut(s) 467
VpaK11BI GGWCC 1 cut(s) 122
VspI ATTAAT 1 cut(s) 659
XapI RAATTY 1 cut(s) 496
XcmI CCANNNNNNNNNTGG 1 cut(s) 464
XmnI GAANNNNTTC 1 cut(s) 288
XspI CTAG 1 cut(s) 716
ZraI GACGTC 1 cut(s) 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.