Rroxscaffold_2G00121040

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000097
Physical Location & Seq
Reverse (-)
53495482 .. 53497177
1696 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00121040.1

Sequence Viewer

Length: 1431 bp
ATGGAAGCTATTAAGCCTCATGCTGTTTTTATTCCAGTTCCAGCTCAAAGCCATATAAAGGCAATGCTTAAACTAGCAAAAATCCTCCATCATAGAGGCTTTCATATCACCTTTGTCAACACAGAGTTCAATCACAAGAGATTTCTTAAATCTCAAGGACCAAACTCCCTACATGGCTTCCCTGATTTTCGGTTCGAAGCCATTCCAGATGGGCTTCCAGAATCGGATGAAGATGCCACCCAAGATGTTGCTTTGCTTTGTGACTCTATCAAGAAAAATTTCTTAGCTCCTTTTTGTGCCCTTATCATGAAACTGAACATTACTAATCCTCCAGTGAGTTGTATAGTTTCAGATGGTTGCATGTCGACATTCACCATCACAGCTGCTGAAGAATTTGGAGTTCCAGTAGCAATGTTCTACACCATTGCTGCTTGCAGCTTCATGGGGTTTACACAATATCCCAGTTTGATCGAAAAAGGACTTGCACCACTTAAAGATGAGAGCTGCTTTACCAATGGTTTTTTAGACAAGGTAATAGACTGGATTCCAGGAATGAAAGAAATTCGTTTAAGGGATCTCCCAACATTCTTTCGAACAACAAATCCCGATGACATCATTTTTAACTACTTCATAGAAGCAACAGGCCCAAGAATTCAGAAAGCTTCAGCTGTTGTTCTCCATACATTTGATGCATTGGAACAAGATGTTTTGGATGCTCTCTCATCTATGCTTCCACATGTTTATGCCATTGGACCTATCCAATTACTTCTCAATCAGATACCGGAACACCCACTGAATCGTATGGGTTACAGTCTATGGAAAGAAGAACCAGAGTGCCTTGAGTGGCTGGAGAACAGGGCACCAAATTCAGTTGTTTATGTGAATTTTGGTAGCGTAGCAGTCTTGACACCAAAACAGCTCGTAGAGTTTGGTTGGGGACTTGCAAACAGCAAGTATCCTTTCTTCTGGGTAATTAGGCCTGATCTGGTTATTGGCGAGTCAGCAATTTTGCCACCTGAATTTGTATCTGAGATCAAAGATAGAGGTCTGCTAGCAAGTTGGTGTCCGCAAGAGCAAGTACTCAACCATCCATCCGTTGGAGGGTTTCTAACACACAGTGGCTGGAATTCAACCATTGAGAGTTTGACTGCCGGAGTGCCTATGTTGTGTTGGCCATTCTTTGGTGACCAGCAGACAGACTGTTACTTTAGTTGCAAGGAATGGGGTGTTGGCATGGAAATCAGTAACGATGTCAAGAGAGACGAAGTAGAGAAGCTTGTTAAAGAGTTAATGGAGGGAGAGAAGGGCAAGAAAATAAGAAACAAGGCCTTGAATTGGAAGAAGCTTGCGCAGGAAGCCACTGCTCCACATGGTTGTTCATCGATAAACTTGGACAATTTAGTGAGTAAAGTGCTACTAAGGAAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

476

Amino Acids

53.37

Weight (kDa)

5.67

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 236 - 437 1.3e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1350
AccB1I GGYRCC 1 cut(s) 859
AccB7I CCANNNNNTGG 2 cut(s) 1097, 1181
AccI GTMKAC 1 cut(s) 365
AciI CCGC 1 cut(s) 1067
AclWI GGATC 1 cut(s) 582
AcoI YGGCCR 1 cut(s) 1172
AcsI RAATTY 8 cut(s) 277, 392, 561, 651, 865, 883, 1019, 1126
AcuI CTGAAG 2 cut(s) 408, 648
AdeI CACNNNGTG 1 cut(s) 1118
AfaI GTAC 1 cut(s) 1080
AfiI CCNNNNNNNGG 5 cut(s) 58, 1097, 1101, 1181, 1335
AflIII ACRYGT 1 cut(s) 736
AgsI TTSAA 3 cut(s) 130, 1131, 1333
AjnI CCWGG 1 cut(s) 547
AjuI GAANNNNNNNTTGG 2 cut(s) 1212, 1244
AloI GAACNNNNNNTCC 2 cut(s) 586, 618
Alw26I GTCTC 1 cut(s) 1254
AlwI GGATC 1 cut(s) 582
AlwNI CAGNNNCTG 2 cut(s) 386, 1122
AoxI GGCC 4 cut(s) 643, 977, 1172, 1326
ApeKI GCWGC 4 cut(s) 383, 428, 435, 504
ApoI RAATTY 8 cut(s) 277, 392, 561, 651, 865, 883, 1019, 1126
Asp700I GAANNNNTTC 2 cut(s) 201, 278
AspLEI GCGC 1 cut(s) 1351
AspS9I GGNCC 3 cut(s) 158, 644, 752
AsuHPI GGTGA 3 cut(s) 100, 364, 1196
AsuII TTCGAA 2 cut(s) 195, 592
AsuNHI GCTAGC 1 cut(s) 1051
AvaII GGWCC 2 cut(s) 158, 752
BaeGI GKGCMC 2 cut(s) 301, 862
BalI TGGCCA 1 cut(s) 1174
BanI GGYRCC 1 cut(s) 859
BarI GAAGNNNNNNTAC 2 cut(s) 947, 979
BbvI GCAGC 4 cut(s) 370, 415, 447, 491
BccI CCATC 6 cut(s) 96, 203, 347, 383, 1095, 1099
BciT130I CCWGG 1 cut(s) 549
BciVI GTATCC 1 cut(s) 966
BcoDI GTCTC 1 cut(s) 1254
BfaI CTAG 3 cut(s) 74, 1052, 1429
BfuI GTATCC 1 cut(s) 966
BisI GCNGC 4 cut(s) 384, 429, 436, 505
BlsI GCNGC 4 cut(s) 385, 430, 437, 506
BmcAI AGTACT 1 cut(s) 1080
Bme1390I CCNGG 1 cut(s) 549
Bme18I GGWCC 2 cut(s) 158, 752
BmgT120I GGNCC 3 cut(s) 158, 644, 752
BmiI GGNNCC 1 cut(s) 861
BmrFI CCNGG 1 cut(s) 549
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 3 cut(s) 223, 679, 703
BmtI GCTAGC 1 cut(s) 1055
BmuI ACTGGG 1 cut(s) 456
BpmI CTGGAG 2 cut(s) 315, 869
Bpu14I TTCGAA 2 cut(s) 195, 592
BpuEI CTTGAG 2 cut(s) 138, 860
Bsa29I ATCGAT 1 cut(s) 1382
BsaWI WCCGGW 1 cut(s) 781
BsaXI ACNNNNNCTCC 4 cut(s) 313, 343, 390, 420
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 1097, 1101, 1181, 1335
Bse1I ACTGG 5 cut(s) 35, 332, 404, 462, 545
Bse3DI GCAATG 3 cut(s) 69, 417, 423
BseBI CCWGG 1 cut(s) 549
BseCI ATCGAT 1 cut(s) 1382
BseGI GGATG 4 cut(s) 232, 718, 1087, 1091
BseLI CCNNNNNNNGG 5 cut(s) 58, 1097, 1101, 1181, 1335
BseMI GCAATG 3 cut(s) 69, 417, 423
BseMII CTCAG 1 cut(s) 1020
BseNI ACTGG 5 cut(s) 35, 332, 404, 462, 545
BseSI GKGCMC 2 cut(s) 301, 862
BseXI GCAGC 4 cut(s) 370, 415, 447, 491
BshFI GGCC 4 cut(s) 645, 979, 1174, 1328
BshNI GGYRCC 1 cut(s) 859
BshVI ATCGAT 1 cut(s) 1382
BsiSI CCGG 2 cut(s) 782, 1152
BslFI GGGAC 1 cut(s) 951
BslI CCNNNNNNNGG 5 cut(s) 58, 1097, 1101, 1181, 1335
BsmAI GTCTC 1 cut(s) 1254
BsmBI CGTCTC 1 cut(s) 1254
BsmFI GGGAC 1 cut(s) 951
BsnI GGCC 4 cut(s) 645, 979, 1174, 1328
Bsp119I TTCGAA 2 cut(s) 195, 592
Bsp1286I GDGCHC 2 cut(s) 301, 862
Bsp143I GATC 4 cut(s) 468, 574, 982, 1032
BspACI CCGC 1 cut(s) 1067
BspANI GGCC 4 cut(s) 645, 979, 1174, 1328
BspCNI CTCAG 1 cut(s) 1021
BspDI ATCGAT 1 cut(s) 1382
BspHI TCATGA 1 cut(s) 306
BspLI GGNNCC 1 cut(s) 861
BspOI GCTAGC 1 cut(s) 1055
BspPI GGATC 1 cut(s) 582
BspT104I TTCGAA 2 cut(s) 195, 592
BspT107I GGYRCC 1 cut(s) 859
BsrDI GCAATG 3 cut(s) 69, 417, 423
BsrI ACTGG 5 cut(s) 35, 332, 404, 462, 545
BssMI GATC 4 cut(s) 468, 574, 982, 1032
Bst2UI CCWGG 1 cut(s) 549
Bst4CI ACNGT 3 cut(s) 812, 1118, 1202
BstBI TTCGAA 2 cut(s) 195, 592
BstC8I GCNNGC 3 cut(s) 433, 1053, 1347
BstDEI CTNAG 3 cut(s) 283, 1029, 1418
BstEII GGTNACC 1 cut(s) 1184
BstF5I GGATG 4 cut(s) 232, 718, 1087, 1091
BstHHI GCGC 1 cut(s) 1351
BstKTI GATC 4 cut(s) 471, 577, 985, 1035
BstMAI GTCTC 1 cut(s) 1254
BstMBI GATC 4 cut(s) 468, 574, 982, 1032
BstMWI GCNNNNNNNGC 1 cut(s) 1355
BstNI CCWGG 1 cut(s) 549
BstNSI RCATGY 2 cut(s) 364, 740
BstPI GGTNACC 1 cut(s) 1184
BstSCI CCNGG 1 cut(s) 547
BstSLI GKGCMC 2 cut(s) 301, 862
BstV1I GCAGC 4 cut(s) 370, 415, 447, 491
BstX2I RGATCY 1 cut(s) 574
BstYI RGATCY 1 cut(s) 574
Bsu15I ATCGAT 1 cut(s) 1382
BsuI GTATCC 1 cut(s) 966
BsuRI GGCC 4 cut(s) 645, 979, 1174, 1328
BsuTUI ATCGAT 1 cut(s) 1382
BtsCI GGATG 4 cut(s) 232, 718, 1087, 1091
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 4 cut(s) 339, 791, 1123, 1359
Cac8I GCNNGC 3 cut(s) 433, 1053, 1347
CaiI CAGNNNCTG 2 cut(s) 386, 1122
CciI TCATGA 1 cut(s) 306
CfoI GCGC 1 cut(s) 1351
Cfr13I GGNCC 3 cut(s) 158, 644, 752
ClaI ATCGAT 1 cut(s) 1382
Csp6I GTAC 1 cut(s) 1079
CviAII CATG 8 cut(s) 20, 173, 307, 361, 442, 737, 1234, 1370
CviQI GTAC 1 cut(s) 1079
DdeI CTNAG 3 cut(s) 283, 1029, 1418
DpnI GATC 4 cut(s) 470, 576, 984, 1034
DpnII GATC 4 cut(s) 468, 574, 982, 1032
DraIII CACNNNGTG 1 cut(s) 1118
EaeI YGGCCR 1 cut(s) 1172
Eco147I AGGCCT 2 cut(s) 979, 1328
Eco47I GGWCC 2 cut(s) 158, 752
Eco57I CTGAAG 2 cut(s) 408, 648
Eco91I GGTNACC 1 cut(s) 1184
EcoO65I GGTNACC 1 cut(s) 1184
EcoRI GAATTC 2 cut(s) 651, 1126
EcoRII CCWGG 1 cut(s) 547
EcoT22I ATGCAT 1 cut(s) 694
Esp3I CGTCTC 1 cut(s) 1254
FaeI CATG 8 cut(s) 23, 176, 310, 364, 445, 740, 1237, 1373
FaqI GGGAC 1 cut(s) 951
FatI CATG 8 cut(s) 19, 172, 306, 360, 441, 736, 1233, 1369
FblI GTMKAC 1 cut(s) 365
Fnu4HI GCNGC 4 cut(s) 384, 429, 436, 505
FokI GGATG 4 cut(s) 239, 725, 1074, 1078
Fsp4HI GCNGC 4 cut(s) 384, 429, 436, 505
FspBI CTAG 3 cut(s) 74, 1052, 1429
FspI TGCGCA 1 cut(s) 1350
GlaI GCGC 1 cut(s) 1350
GluI GCNGC 4 cut(s) 384, 429, 436, 505
GsuI CTGGAG 2 cut(s) 315, 869
HaeIII GGCC 4 cut(s) 645, 979, 1174, 1328
HapII CCGG 2 cut(s) 782, 1152
HhaI GCGC 1 cut(s) 1351
Hin1II CATG 8 cut(s) 23, 176, 310, 364, 445, 740, 1237, 1373
Hin6I GCGC 1 cut(s) 1349
HinP1I GCGC 1 cut(s) 1349
HincII GTYRAC 2 cut(s) 118, 366
HindII GTYRAC 2 cut(s) 118, 366
HindIII AAGCTT 3 cut(s) 660, 1274, 1343
HinfI GANTC 5 cut(s) 221, 263, 544, 796, 998
HpaII CCGG 2 cut(s) 782, 1152
HphI GGTGA 3 cut(s) 100, 364, 1196
Hpy166II GTNNAC 3 cut(s) 118, 366, 450
Hpy188I TCNGA 5 cut(s) 226, 352, 657, 777, 1030
Hpy188III TCNNGA 7 cut(s) 206, 218, 271, 307, 605, 904, 1255
Hpy8I GTNNAC 3 cut(s) 118, 366, 450
HpyAV CCTTC 1 cut(s) 1297
HpyCH4III ACNGT 3 cut(s) 812, 1118, 1202
HpyCH4V TGCA 6 cut(s) 360, 435, 485, 692, 944, 1215
HpyF10VI GCNNNNNNNGC 1 cut(s) 1355
HpyF3I CTNAG 3 cut(s) 283, 1029, 1418
Hsp92II CATG 8 cut(s) 23, 176, 310, 364, 445, 740, 1237, 1373
HspAI GCGC 1 cut(s) 1349
Kzo9I GATC 4 cut(s) 468, 574, 982, 1032
LmnI GCTCC 2 cut(s) 292, 1369
Lsp1109I GCAGC 4 cut(s) 370, 415, 447, 491
LweI GCATC 3 cut(s) 223, 679, 703
MaeI CTAG 3 cut(s) 74, 1052, 1429
MaeIII GTNAC 5 cut(s) 260, 806, 1184, 1202, 1244
MalI GATC 4 cut(s) 470, 576, 984, 1034
MboI GATC 4 cut(s) 468, 574, 982, 1032
MboII GAAGA 5 cut(s) 242, 401, 836, 955, 1351
MflI RGATCY 1 cut(s) 574
MhlI GDGCHC 2 cut(s) 301, 862
MlsI TGGCCA 1 cut(s) 1174
MluNI TGGCCA 1 cut(s) 1174
MlyI GAGTC 2 cut(s) 257, 1007
MmeI TCCRAC 1 cut(s) 1078
MnlI CCTC 7 cut(s) 27, 89, 95, 339, 1037, 1094, 1288
Mox20I TGGCCA 1 cut(s) 1174
Mph1103I ATGCAT 1 cut(s) 694
MroXI GAANNNNTTC 2 cut(s) 201, 278
MscI TGGCCA 1 cut(s) 1174
MseI TTAA 8 cut(s) 12, 69, 147, 492, 569, 621, 1281, 1289
MslI CAYNNNNRTG 1 cut(s) 741
Msp20I TGGCCA 1 cut(s) 1174
MspA1I CMGCKG 2 cut(s) 383, 668
MspI CCGG 2 cut(s) 782, 1152
MspR9I CCNGG 1 cut(s) 549
MvaI CCWGG 1 cut(s) 549
MwoI GCNNNNNNNGC 1 cut(s) 1355
NdeII GATC 4 cut(s) 468, 574, 982, 1032
NheI GCTAGC 1 cut(s) 1051
NlaIII CATG 8 cut(s) 23, 176, 310, 364, 445, 740, 1237, 1373
NlaIV GGNNCC 1 cut(s) 861
NmuCI GTSAC 2 cut(s) 260, 1184
NsbI TGCGCA 1 cut(s) 1350
NsiI ATGCAT 1 cut(s) 694
NspI RCATGY 2 cut(s) 364, 740
NspV TTCGAA 2 cut(s) 195, 592
PagI TCATGA 1 cut(s) 306
PceI AGGCCT 2 cut(s) 979, 1328
PciI ACATGT 1 cut(s) 736
PdmI GAANNNNTTC 2 cut(s) 201, 278
PfeI GAWTC 3 cut(s) 221, 544, 796
PflMI CCANNNNNTGG 2 cut(s) 1097, 1181
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 4 cut(s) 385, 430, 437, 506
PleI GAGTC 2 cut(s) 257, 1006
PpsI GAGTC 2 cut(s) 257, 1006
PscI ACATGT 1 cut(s) 736
Psp6I CCWGG 1 cut(s) 547
PspEI GGTNACC 1 cut(s) 1184
PspGI CCWGG 1 cut(s) 547
PspN4I GGNNCC 1 cut(s) 861
PspPI GGNCC 3 cut(s) 158, 644, 752
PstNI CAGNNNCTG 2 cut(s) 386, 1122
PsuI RGATCY 1 cut(s) 574
PvuII CAGCTG 2 cut(s) 383, 668
RsaI GTAC 1 cut(s) 1080
RsaNI GTAC 1 cut(s) 1079
RseI CAYNNNNRTG 1 cut(s) 741
SalI GTCGAC 1 cut(s) 364
SaqAI TTAA 8 cut(s) 12, 69, 147, 492, 569, 621, 1281, 1289
SatI GCNGC 4 cut(s) 384, 429, 436, 505
Sau3AI GATC 4 cut(s) 468, 574, 982, 1032
Sau96I GGNCC 3 cut(s) 158, 644, 752
ScaI AGTACT 1 cut(s) 1080
SchI GAGTC 2 cut(s) 257, 1007
ScrFI CCNGG 1 cut(s) 549
SduI GDGCHC 2 cut(s) 301, 862
SfaNI GCATC 3 cut(s) 223, 679, 703
SfuI TTCGAA 2 cut(s) 195, 592
SinI GGWCC 2 cut(s) 158, 752
SmiMI CAYNNNNRTG 1 cut(s) 741
SmlI CTYRAG 2 cut(s) 153, 839
SmoI CTYRAG 2 cut(s) 153, 839
SseBI AGGCCT 2 cut(s) 979, 1328
SsiI CCGC 1 cut(s) 1067
SspMI CTAG 3 cut(s) 74, 1052, 1429
StuI AGGCCT 2 cut(s) 979, 1328
StyD4I CCNGG 1 cut(s) 547
TaaI ACNGT 3 cut(s) 812, 1118, 1202
TaqI TCGA 5 cut(s) 195, 365, 471, 592, 1382
TatI WGTACW 1 cut(s) 1078
TfiI GAWTC 3 cut(s) 221, 544, 796
Tru1I TTAA 8 cut(s) 12, 69, 147, 492, 569, 621, 1281, 1289
Tru9I TTAA 8 cut(s) 12, 69, 147, 492, 569, 621, 1281, 1289
TscAI CASTG 4 cut(s) 339, 798, 1123, 1366
TseFI GTSAC 2 cut(s) 260, 1184
TseI GCWGC 4 cut(s) 383, 428, 435, 504
Tsp45I GTSAC 2 cut(s) 260, 1184
TspDTI ATGAA 7 cut(s) 92, 243, 323, 430, 569, 619, 1368
TspGWI ACGGA 1 cut(s) 1084
TspRI CASTG 4 cut(s) 339, 798, 1123, 1366
Van91I CCANNNNNTGG 2 cut(s) 1097, 1181
VpaK11BI GGWCC 2 cut(s) 158, 752
XapI RAATTY 8 cut(s) 277, 392, 561, 651, 865, 883, 1019, 1126
XceI RCATGY 2 cut(s) 364, 740
XcmI CCANNNNNNNNNTGG 1 cut(s) 1094
XmiI GTMKAC 1 cut(s) 365
XmnI GAANNNNTTC 2 cut(s) 201, 278
XspI CTAG 3 cut(s) 74, 1052, 1429
ZrmI AGTACT 1 cut(s) 1080
Zsp2I ATGCAT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.