RchiOBHm_Chr5g0029061

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
22785741 .. 22787086
1346 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30847

Sequence Viewer

Length: 879 bp
ATGAAGGACATCTGTTTAAAACATCTTCCAACCTTCTTTAGGACCACAAATCCTGATGACACCTTGTTCAACATCTGCATGGAAACAACAGAAGCAGCGGATAGAGCTTCAGCAGTTGTTCTTCTCACTTTTGACGCTTTGGAAAAAGATGTTTTAGAAGCTCTCTCCTCTTCTTTGTCTCCACCTGTTTATACAATTGGTCCTCTCCAGTTACTTCTCAACCAAATACCAGAAAATCCTTTGGAATCTATTGGATACAACTTTTTGAAAGAAGAAACAGAATGTCTCCAATGGCTGAACTCAAAAGCTCCAAACTCAGTTATTTATGTAAATTTTGGCAGCAAAGCCGTCTTGACAGTAGCACAGCTACTTGAGTTTGGATGGGGATTAGCAAATACTAAGCTTCCATTCTTCTGGGTTATTAGGCCCGATTTGGTTGTTGGCAAATCGCCAGTTTTGCCCCCAGAGTTCGAAGCTGAAACCAAAGACAGAGGTCTAATCGCAAGTTGGTGCCCCCAAGAACAAGTCCTAAGCCACCCAACAGTTGGAGGGTTTCTAACACATAGTGGTTGGAATTCAACTATTGAAAGTTTGACAGCTGGAGTCCCGATGCTGTGTTGGCCATTCTTTGCAGACCAGCAAACAAACAGTTACTACACTTGTAGTAAATGGGGCATTGGCATGGAGATAAACAATGATGTCAAGAGAGGTGATGTGGAAAAACTTGTAAATGAGTTAATGAAGGGAGAGAAGTGTAAGAAAATGAAAAGCAAGGTCTTGGAGTGGAAGAAACTTGCGGAAGAAGCAACTGCTCCACATGGTTCTTCATCAATAAATTTAGACAATCTAGTGAATCAAGTGCTATTGAGACAACGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

292

Amino Acids

32.64

Weight (kDa)

5.26

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 33 - 254 1.5e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 510
AccB7I CCANNNNNTGG 1 cut(s) 545
AciI CCGC 2 cut(s) 98, 797
AcoI YGGCCR 1 cut(s) 620
AcsI RAATTY 3 cut(s) 331, 574, 835
AcuI CTGAAG 1 cut(s) 93
AdeI CACNNNGTG 1 cut(s) 566
AfiI CCNNNNNNNGG 2 cut(s) 39, 545
AgsI TTSAA 4 cut(s) 70, 268, 579, 587
AluBI AGCT 7 cut(s) 107, 161, 308, 367, 403, 476, 599
AluI AGCT 7 cut(s) 107, 161, 308, 367, 403, 476, 599
Alw26I GTCTC 3 cut(s) 183, 290, 862
AoxI GGCC 2 cut(s) 425, 620
ApeKI GCWGC 2 cut(s) 95, 339
ApoI RAATTY 3 cut(s) 331, 574, 835
AspS9I GGNCC 3 cut(s) 42, 200, 426
AsuHPI GGTGA 1 cut(s) 722
AsuII TTCGAA 1 cut(s) 471
AvaII GGWCC 2 cut(s) 42, 200
BaeGI GKGCMC 1 cut(s) 515
BalI TGGCCA 1 cut(s) 622
BanI GGYRCC 1 cut(s) 510
BbvI GCAGC 2 cut(s) 107, 351
BccI CCATC 1 cut(s) 375
BceAI ACGGC 1 cut(s) 332
BciVI GTATCC 1 cut(s) 248
BcoDI GTCTC 3 cut(s) 183, 290, 862
BfaI CTAG 2 cut(s) 848, 877
BfuI GTATCC 1 cut(s) 248
BisI GCNGC 2 cut(s) 96, 340
BlsI GCNGC 2 cut(s) 97, 341
Bme18I GGWCC 2 cut(s) 42, 200
BmgT120I GGNCC 3 cut(s) 42, 200, 426
BmiI GGNNCC 1 cut(s) 512
BmsI GCATC 1 cut(s) 600
BoxI GACNNNNGTC 1 cut(s) 492
BpmI CTGGAG 2 cut(s) 191, 621
Bpu10I CCTNAGC 1 cut(s) 530
Bpu14I TTCGAA 1 cut(s) 471
BpuEI CTTGAG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 2 cut(s) 39, 545
Bse1I ACTGG 2 cut(s) 208, 452
BseGI GGATG 1 cut(s) 386
BseLI CCNNNNNNNGG 2 cut(s) 39, 545
BseMII CTCAG 1 cut(s) 330
BseNI ACTGG 2 cut(s) 208, 452
BseRI GAGGAG 1 cut(s) 157
BseSI GKGCMC 1 cut(s) 515
BseXI GCAGC 2 cut(s) 107, 351
BshFI GGCC 2 cut(s) 427, 622
BshNI GGYRCC 1 cut(s) 510
BslFI GGGAC 1 cut(s) 590
BslI CCNNNNNNNGG 2 cut(s) 39, 545
BsmAI GTCTC 3 cut(s) 183, 290, 862
BsmFI GGGAC 1 cut(s) 590
BsnI GGCC 2 cut(s) 427, 622
Bsp119I TTCGAA 1 cut(s) 471
Bsp1286I GDGCHC 1 cut(s) 515
BspACI CCGC 2 cut(s) 98, 797
BspANI GGCC 2 cut(s) 427, 622
BspCNI CTCAG 1 cut(s) 329
BspLI GGNNCC 1 cut(s) 512
BspT104I TTCGAA 1 cut(s) 471
BspT107I GGYRCC 1 cut(s) 510
BsrI ACTGG 2 cut(s) 208, 452
Bst4CI ACNGT 3 cut(s) 358, 544, 650
Bst6I CTCTTC 1 cut(s) 175
BstBI TTCGAA 1 cut(s) 471
BstDEI CTNAG 3 cut(s) 316, 399, 530
BstENI CCTNNNNNAGG 1 cut(s) 37
BstF5I GGATG 1 cut(s) 386
BstMAI GTCTC 3 cut(s) 183, 290, 862
BstMWI GCNNNNNNNGC 4 cut(s) 104, 457, 619, 803
BstPAI GACNNNNGTC 1 cut(s) 492
BstSLI GKGCMC 1 cut(s) 515
BstV1I GCAGC 2 cut(s) 107, 351
BstXI CCANNNNNNTGG 1 cut(s) 414
BsuI GTATCC 1 cut(s) 248
BsuRI GGCC 2 cut(s) 427, 622
BtsCI GGATG 1 cut(s) 386
Cfr13I GGNCC 3 cut(s) 42, 200, 426
CseI GACGC 1 cut(s) 143
CviAII CATG 3 cut(s) 79, 682, 818
DdeI CTNAG 3 cut(s) 316, 399, 530
DraI TTTAAA 1 cut(s) 18
DraIII CACNNNGTG 1 cut(s) 566
EaeI YGGCCR 1 cut(s) 620
Eam1104I CTCTTC 1 cut(s) 175
EarI CTCTTC 1 cut(s) 175
Eco47I GGWCC 2 cut(s) 42, 200
Eco57I CTGAAG 1 cut(s) 93
EcoNI CCTNNNNNAGG 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 574
FaeI CATG 3 cut(s) 82, 685, 821
FaiI YATR 6 cut(s) 80, 192, 327, 564, 683, 819
FaqI GGGAC 1 cut(s) 590
FatI CATG 3 cut(s) 78, 681, 817
Fnu4HI GCNGC 2 cut(s) 96, 340
FokI GGATG 1 cut(s) 393
Fsp4HI GCNGC 2 cut(s) 96, 340
FspBI CTAG 2 cut(s) 848, 877
GluI GCNGC 2 cut(s) 96, 340
GsuI CTGGAG 2 cut(s) 191, 621
HaeIII GGCC 2 cut(s) 427, 622
HgaI GACGC 1 cut(s) 143
Hin1II CATG 3 cut(s) 82, 685, 821
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 3 cut(s) 245, 603, 853
HphI GGTGA 1 cut(s) 722
Hpy188III TCNNGA 4 cut(s) 53, 352, 607, 703
HpyAV CCTTC 2 cut(s) 43, 736
HpyCH4III ACNGT 3 cut(s) 358, 544, 650
HpyCH4V TGCA 2 cut(s) 78, 632
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 457, 619, 803
HpyF3I CTNAG 3 cut(s) 316, 399, 530
Hsp92II CATG 3 cut(s) 82, 685, 821
LmnI GCTCC 2 cut(s) 313, 817
LpnPI CCDG 9 cut(s) 66, 198, 221, 243, 400, 465, 477, 585, 650
Lsp1109I GCAGC 2 cut(s) 107, 351
LweI GCATC 1 cut(s) 600
MaeI CTAG 2 cut(s) 848, 877
MaeIII GTNAC 2 cut(s) 210, 650
MboII GAAGA 8 cut(s) 17, 113, 162, 284, 403, 799, 812, 816
MfeI CAATTG 1 cut(s) 195
MhlI GDGCHC 1 cut(s) 515
MlsI TGGCCA 1 cut(s) 622
MluCI AATT 4 cut(s) 195, 331, 574, 835
MluNI TGGCCA 1 cut(s) 622
MlyI GAGTC 1 cut(s) 612
MmeI TCCRAC 3 cut(s) 53, 526, 551
MnlI CCTC 5 cut(s) 178, 213, 485, 542, 701
Mox20I TGGCCA 1 cut(s) 622
MscI TGGCCA 1 cut(s) 622
MseI TTAA 2 cut(s) 17, 737
MslI CAYNNNNRTG 2 cut(s) 77, 680
Msp20I TGGCCA 1 cut(s) 622
MspA1I CMGCKG 2 cut(s) 98, 599
MunI CAATTG 1 cut(s) 195
MwoI GCNNNNNNNGC 4 cut(s) 104, 457, 619, 803
NlaIII CATG 3 cut(s) 82, 685, 821
NlaIV GGNNCC 1 cut(s) 512
NspV TTCGAA 1 cut(s) 471
PfeI GAWTC 2 cut(s) 245, 853
PflMI CCANNNNNTGG 1 cut(s) 545
PkrI GCNGC 2 cut(s) 97, 341
PleI GAGTC 1 cut(s) 611
PpsI GAGTC 1 cut(s) 611
PshAI GACNNNNGTC 1 cut(s) 492
PspN4I GGNNCC 1 cut(s) 512
PspPI GGNCC 3 cut(s) 42, 200, 426
PvuII CAGCTG 1 cut(s) 599
RseI CAYNNNNRTG 2 cut(s) 77, 680
SaqAI TTAA 2 cut(s) 17, 737
SatI GCNGC 2 cut(s) 96, 340
Sau96I GGNCC 3 cut(s) 42, 200, 426
SchI GAGTC 1 cut(s) 612
SduI GDGCHC 1 cut(s) 515
SfaNI GCATC 1 cut(s) 600
SfuI TTCGAA 1 cut(s) 471
SinI GGWCC 2 cut(s) 42, 200
SmiMI CAYNNNNRTG 2 cut(s) 77, 680
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
Sse9I AATT 4 cut(s) 195, 331, 574, 835
SsiI CCGC 2 cut(s) 98, 797
SspMI CTAG 2 cut(s) 848, 877
TaaI ACNGT 3 cut(s) 358, 544, 650
TaqI TCGA 1 cut(s) 471
TasI AATT 4 cut(s) 195, 331, 574, 835
TfiI GAWTC 2 cut(s) 245, 853
Tru1I TTAA 2 cut(s) 17, 737
Tru9I TTAA 2 cut(s) 17, 737
TseI GCWGC 2 cut(s) 95, 339
TspDTI ATGAA 4 cut(s) 17, 755, 779, 816
Van91I CCANNNNNTGG 1 cut(s) 545
VpaK11BI GGWCC 2 cut(s) 42, 200
XagI CCTNNNNNAGG 1 cut(s) 37
XapI RAATTY 3 cut(s) 331, 574, 835
XcmI CCANNNNNNNNNTGG 1 cut(s) 542
XspI CTAG 2 cut(s) 848, 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.