Prupe.3G188400_v2.0.a1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000097
Physical Location & Seq
Forward (+)
20172329 .. 20173876
1548 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G188400.1

Sequence Viewer

Length: 1452 bp
ATGGGTTCTAATTCCAAGCCTCATGCTGTTTGCATTCCAGTTCCAACTCAAGGCCATATCAAGGCACATCTTAAACTGGCAAAGATCCTCCACCACAAAGGCTTTCATATAACCTTTGTCAACACAGAGTTCAACCACAAGAGACTTGTCAAATCTCTAGGACCCAACTCCCTTGACGGCTTGCCCGATTTTCGATTCGAAACAATCCCGGATGGCCTTCCGGATTCAGATGAAGATGCCACCCAAGACCTGACTTTGCTTTGTGATTCCATCTTGAAAAACTTCTTGGCACCTTTTCTTGACCTCCTCACAAAACTCAATAATGATGTTACGTCAACTTCCAACAATGCTCCTCCTCCTGTGACTTGCATTGTTTCAGACCCTTTCATGCCATTCACAACCCCTGCTGCTGAACAGCTTGGAATTCCTGTCACTCTCTTCTTTACTTTTGCAGCAAGCAGCTTCATGGGCTTCAAGCAATATCCCACTTTGGTGGAAAAAGGTCTTGCACCTCTCAAAGATGAGAGCTTCTTGACAAATGGCTTTCTGGACCAGGTGATAGATTGGGTTCCAGGAATGAAAGGTATTCGTCTAAGGGATCTCCCAAACAACTTCATAACTACAAATCCCAATGACAGCATTTTCAATGGCATCCTTGAAGTAATTGGAAGACTTCATAAAGCTTCAGCTGTTGTTGTTCATACTTTCGATGCATTGGAGCCAGATGTTTTGGATGCTCTCTCATCTATGTCTCCACCTGTATATGCCATTGGCCCTCTCCAATTACTTCTCAATCAAATACCAGAACACCCTTTGAAGTCTCTTGGGTACAGCCTTTGGAAAGAAGAAACTGAGTGCCTCCAATGGCTAAACTCCACGGTACCAAACTCGGTTGTTTATGTGAATTTTGGGAGCATAACGGTCATGACACCAAATCAACTTGTCGAGTTTGGTTGGGGACTTGCAAATAGCAAGCTTAATTTCTTCTGGGTAATTAGGCCTGATTTGGTTATTGGCGAGTCAGCGATTTTGCCACCGGAGTTTGTGGAGGAAACTAAGGAAAGAAGTCTAATAGCAAGTTGGTGCCCACAAGAGCAAGTCCTTGACCACCCTTCAGTTGGAGGATTTTTAACACACAACGGTTGGAATTCAACGATTGAGAGCTTGTCTGCAGGAGTTCCTATGTTGTGCTGGCCATTCTTTGCTGATCAGCAAACAAACTGTCACTATACCTGCAAGGAATGGGGCATTGGGATGGAGATCAACAATGATGTCAAGAGAGATGATGTAGAGAAACTTGTTAGAGAGTTAATGGAGGGAGAGAAGGGTAAGAAGATTAAGAACAAGGCCATGGAGTGGAAAACACTGGCAGAGGAGGCCACCAGTCTACACGGTTCTTCGTCCACAAACTTAGACAATTTAGTGAATCAAATGCAATCAAGAAAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

484

Amino Acids

53.67

Weight (kDa)

5.27

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1241
Acc65I GGTACC 1 cut(s) 880
AccB1I GGYRCC 3 cut(s) 289, 880, 1083
AccB7I CCANNNNNTGG 1 cut(s) 1356
AccI GTMKAC 1 cut(s) 1387
AccIII TCCGGA 1 cut(s) 220
AclWI GGATC 2 cut(s) 79, 606
AcoI YGGCCR 1 cut(s) 1193
AcsI RAATTY 3 cut(s) 423, 904, 1147
AcuI CTGAAG 2 cut(s) 669, 1098
AfaI GTAC 2 cut(s) 830, 882
AfiI CCNNNNNNNGG 4 cut(s) 50, 61, 1118, 1356
AgsI TTSAA 7 cut(s) 133, 277, 475, 646, 659, 817, 1152
AjnI CCWGG 2 cut(s) 552, 571
AjuI GAANNNNNNNTTGG 4 cut(s) 269, 301, 1233, 1265
AleI CACNNNNGTG 1 cut(s) 491
AluBI AGCT 8 cut(s) 418, 462, 528, 683, 689, 976, 1164, 1449
AluI AGCT 8 cut(s) 418, 462, 528, 683, 689, 976, 1164, 1449
Alw26I GTCTC 3 cut(s) 136, 756, 825
AlwI GGATC 2 cut(s) 79, 606
Aor13HI TCCGGA 1 cut(s) 220
AoxI GGCC 7 cut(s) 52, 214, 772, 998, 1193, 1347, 1377
ApeKI GCWGC 3 cut(s) 407, 452, 459
ApoI RAATTY 3 cut(s) 423, 904, 1147
ArsI GACNNNNNNTTYG 2 cut(s) 1207, 1239
Asp700I GAANNNNTTC 1 cut(s) 281
Asp718I GGTACC 1 cut(s) 880
AspS9I GGNCC 3 cut(s) 161, 550, 773
AsuC2I CCSGG 1 cut(s) 209
AsuHPI GGTGA 1 cut(s) 568
AsuII TTCGAA 1 cut(s) 198
AvaII GGWCC 2 cut(s) 161, 550
BaeGI GKGCMC 1 cut(s) 1088
BalI TGGCCA 1 cut(s) 1195
BanI GGYRCC 3 cut(s) 289, 880, 1083
BbsI GAAGAC 1 cut(s) 676
BbvI GCAGC 3 cut(s) 394, 464, 471
BccI CCATC 3 cut(s) 206, 278, 1249
BceAI ACGGC 1 cut(s) 193
BciT130I CCWGG 2 cut(s) 554, 573
BclI TGATCA 1 cut(s) 1207
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 3 cut(s) 136, 756, 825
BfaI CTAG 2 cut(s) 158, 1450
BfmI CTRYAG 1 cut(s) 1170
BfuAI ACCTGC 1 cut(s) 1241
BisI GCNGC 3 cut(s) 408, 453, 460
BlsI GCNGC 3 cut(s) 409, 454, 461
Bme1390I CCNGG 3 cut(s) 209, 554, 573
Bme18I GGWCC 2 cut(s) 161, 550
BmgT120I GGNCC 3 cut(s) 161, 550, 773
BmiI GGNNCC 6 cut(s) 163, 291, 570, 720, 882, 1085
BmrFI CCNGG 3 cut(s) 209, 554, 573
BmsI GCATC 4 cut(s) 226, 660, 700, 724
BpiI GAAGAC 1 cut(s) 676
Bpu14I TTCGAA 1 cut(s) 198
BpuEI CTTGAG 1 cut(s) 33
BpuMI CCSGG 1 cut(s) 209
BsaBI GATNNNNATC 1 cut(s) 1259
BsaJI CCNNGG 2 cut(s) 876, 1350
BsaWI WCCGGW 2 cut(s) 220, 1036
Bsc4I CCNNNNNNNGG 4 cut(s) 50, 61, 1118, 1356
Bse1I ACTGG 4 cut(s) 38, 81, 1371, 1383
Bse8I GATNNNNATC 1 cut(s) 1259
BseAI TCCGGA 1 cut(s) 220
BseBI CCWGG 2 cut(s) 554, 573
BseDI CCNNGG 2 cut(s) 876, 1350
BseGI GGATG 4 cut(s) 217, 651, 739, 1260
BseJI GATNNNNATC 1 cut(s) 1259
BseLI CCNNNNNNNGG 4 cut(s) 50, 61, 1118, 1356
BseMII CTCAG 1 cut(s) 843
BseNI ACTGG 4 cut(s) 38, 81, 1371, 1383
BseRI GAGGAG 4 cut(s) 296, 342, 345, 1388
BseSI GKGCMC 1 cut(s) 1088
BseXI GCAGC 3 cut(s) 394, 464, 471
BshFI GGCC 7 cut(s) 54, 216, 774, 1000, 1195, 1349, 1379
BshNI GGYRCC 3 cut(s) 289, 880, 1083
BsiSI CCGG 3 cut(s) 209, 221, 1037
BslFI GGGAC 1 cut(s) 972
BslI CCNNNNNNNGG 4 cut(s) 50, 61, 1118, 1356
BsmAI GTCTC 3 cut(s) 136, 756, 825
BsmFI GGGAC 1 cut(s) 972
BsmI GAATGC 1 cut(s) 33
BsnI GGCC 7 cut(s) 54, 216, 774, 1000, 1195, 1349, 1379
Bsp119I TTCGAA 1 cut(s) 198
Bsp1286I GDGCHC 1 cut(s) 1088
Bsp13I TCCGGA 1 cut(s) 220
Bsp143I GATC 4 cut(s) 84, 598, 1207, 1260
Bsp19I CCATGG 1 cut(s) 1350
BspANI GGCC 7 cut(s) 54, 216, 774, 1000, 1195, 1349, 1379
BspCNI CTCAG 1 cut(s) 844
BspEI TCCGGA 1 cut(s) 220
BspHI TCATGA 1 cut(s) 924
BspLI GGNNCC 6 cut(s) 163, 291, 570, 720, 882, 1085
BspMAI CTGCAG 1 cut(s) 1174
BspMI ACCTGC 1 cut(s) 1241
BspPI GGATC 2 cut(s) 79, 606
BspT104I TTCGAA 1 cut(s) 198
BspT107I GGYRCC 3 cut(s) 289, 880, 1083
BsrI ACTGG 4 cut(s) 38, 81, 1371, 1383
BssECI CCNNGG 2 cut(s) 876, 1350
BssMI GATC 4 cut(s) 84, 598, 1207, 1260
BssT1I CCWWGG 1 cut(s) 1350
Bst2UI CCWGG 2 cut(s) 554, 573
Bst4CI ACNGT 5 cut(s) 880, 922, 1142, 1223, 1394
Bst6I CTCTTC 1 cut(s) 443
BstBI TTCGAA 1 cut(s) 198
BstC8I GCNNGC 4 cut(s) 182, 457, 974, 1193
BstDEI CTNAG 4 cut(s) 593, 852, 1056, 1411
BstDSI CCRYGG 2 cut(s) 876, 1350
BstF5I GGATG 4 cut(s) 217, 651, 739, 1260
BstKTI GATC 4 cut(s) 87, 601, 1210, 1263
BstMAI GTCTC 3 cut(s) 136, 756, 825
BstMBI GATC 4 cut(s) 84, 598, 1207, 1260
BstMWI GCNNNNNNNGC 2 cut(s) 468, 1376
BstNI CCWGG 2 cut(s) 554, 573
BstSCI CCNGG 3 cut(s) 207, 552, 571
BstSFI CTRYAG 1 cut(s) 1170
BstSLI GKGCMC 1 cut(s) 1088
BstV1I GCAGC 3 cut(s) 394, 464, 471
BstV2I GAAGAC 1 cut(s) 676
BstX2I RGATCY 2 cut(s) 84, 598
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 2 cut(s) 84, 598
BsuRI GGCC 7 cut(s) 54, 216, 774, 1000, 1195, 1349, 1379
BtgI CCRYGG 2 cut(s) 876, 1350
BtsCI GGATG 4 cut(s) 217, 651, 739, 1260
BtsIMutI CAGTG 1 cut(s) 1364
BveI ACCTGC 1 cut(s) 1241
Cac8I GCNNGC 4 cut(s) 182, 457, 974, 1193
CciI TCATGA 1 cut(s) 924
Cfr13I GGNCC 3 cut(s) 161, 550, 773
CsiI ACCWGGT 1 cut(s) 552
Csp6I GTAC 2 cut(s) 829, 881
CviAII CATG 5 cut(s) 23, 388, 466, 925, 1351
CviQI GTAC 2 cut(s) 829, 881
DdeI CTNAG 4 cut(s) 593, 852, 1056, 1411
DpnI GATC 4 cut(s) 86, 600, 1209, 1262
DpnII GATC 4 cut(s) 84, 598, 1207, 1260
EaeI YGGCCR 1 cut(s) 1193
Eam1104I CTCTTC 1 cut(s) 443
EarI CTCTTC 1 cut(s) 443
Eco130I CCWWGG 1 cut(s) 1350
Eco147I AGGCCT 1 cut(s) 1000
Eco47I GGWCC 2 cut(s) 161, 550
Eco57I CTGAAG 2 cut(s) 669, 1098
EcoO109I RGGNCCY 1 cut(s) 161
EcoRI GAATTC 2 cut(s) 423, 1147
EcoRII CCWGG 2 cut(s) 552, 571
EcoT14I CCWWGG 1 cut(s) 1350
EcoT22I ATGCAT 1 cut(s) 715
ErhI CCWWGG 1 cut(s) 1350
FaeI CATG 5 cut(s) 26, 391, 469, 928, 1354
FaqI GGGAC 1 cut(s) 972
FatI CATG 5 cut(s) 22, 387, 465, 924, 1350
FbaI TGATCA 1 cut(s) 1207
FblI GTMKAC 1 cut(s) 1387
Fnu4HI GCNGC 3 cut(s) 408, 453, 460
FokI GGATG 4 cut(s) 224, 638, 746, 1267
Fsp4HI GCNGC 3 cut(s) 408, 453, 460
FspBI CTAG 2 cut(s) 158, 1450
GluI GCNGC 3 cut(s) 408, 453, 460
HaeIII GGCC 7 cut(s) 54, 216, 774, 1000, 1195, 1349, 1379
HapII CCGG 3 cut(s) 209, 221, 1037
Hin1II CATG 5 cut(s) 26, 391, 469, 928, 1354
HincII GTYRAC 2 cut(s) 121, 336
HindII GTYRAC 2 cut(s) 121, 336
HindIII AAGCTT 2 cut(s) 681, 974
HinfI GANTC 5 cut(s) 195, 224, 266, 1019, 1426
HpaII CCGG 3 cut(s) 209, 221, 1037
HphI GGTGA 1 cut(s) 568
Hpy166II GTNNAC 4 cut(s) 121, 336, 1388, 1404
Hpy188I TCNGA 2 cut(s) 229, 379
Hpy188III TCNNGA 8 cut(s) 221, 274, 299, 532, 548, 925, 1276, 1440
Hpy8I GTNNAC 4 cut(s) 121, 336, 1388, 1404
HpyAV CCTTC 3 cut(s) 227, 1122, 1318
HpyCH4III ACNGT 5 cut(s) 880, 922, 1142, 1223, 1394
HpyCH4IV ACGT 1 cut(s) 332
HpyCH4V TGCA 9 cut(s) 33, 369, 452, 509, 713, 965, 1172, 1236, 1435
HpyF10VI GCNNNNNNNGC 2 cut(s) 468, 1376
HpyF3I CTNAG 4 cut(s) 593, 852, 1056, 1411
HpySE526I ACGT 1 cut(s) 332
Hsp92II CATG 5 cut(s) 26, 391, 469, 928, 1354
Kpn2I TCCGGA 1 cut(s) 220
KpnI GGTACC 1 cut(s) 884
Ksp22I TGATCA 1 cut(s) 1207
Kzo9I GATC 4 cut(s) 84, 598, 1207, 1260
LmnI GCTCC 3 cut(s) 355, 718, 912
Lsp1109I GCAGC 3 cut(s) 394, 464, 471
LweI GCATC 4 cut(s) 226, 660, 700, 724
MabI ACCWGGT 1 cut(s) 552
MaeI CTAG 2 cut(s) 158, 1450
MaeII ACGT 1 cut(s) 332
MaeIII GTNAC 4 cut(s) 328, 361, 430, 1223
MalI GATC 4 cut(s) 86, 600, 1209, 1262
MboI GATC 4 cut(s) 84, 598, 1207, 1260
MboII GAAGA 7 cut(s) 245, 430, 681, 857, 976, 1345, 1389
MflI RGATCY 2 cut(s) 84, 598
MhlI GDGCHC 1 cut(s) 1088
MlsI TGGCCA 1 cut(s) 1195
MluCI AATT 9 cut(s) 10, 423, 663, 782, 904, 979, 993, 1147, 1417
MluNI TGGCCA 1 cut(s) 1195
MlyI GAGTC 1 cut(s) 1028
MmeI TCCRAC 4 cut(s) 68, 366, 1099, 1124
Mox20I TGGCCA 1 cut(s) 1195
Mph1103I ATGCAT 1 cut(s) 715
MroI TCCGGA 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 281
MscI TGGCCA 1 cut(s) 1195
MseI TTAA 5 cut(s) 72, 978, 1130, 1310, 1338
MslI CAYNNNNRTG 2 cut(s) 491, 1253
Msp20I TGGCCA 1 cut(s) 1195
MspA1I CMGCKG 1 cut(s) 689
MspI CCGG 3 cut(s) 209, 221, 1037
MspR9I CCNGG 3 cut(s) 209, 554, 573
Mva1269I GAATGC 1 cut(s) 33
MvaI CCWGG 2 cut(s) 554, 573
MwoI GCNNNNNNNGC 2 cut(s) 468, 1376
NciI CCSGG 1 cut(s) 209
NcoI CCATGG 1 cut(s) 1350
NdeII GATC 4 cut(s) 84, 598, 1207, 1260
NlaIII CATG 5 cut(s) 26, 391, 469, 928, 1354
NlaIV GGNNCC 6 cut(s) 163, 291, 570, 720, 882, 1085
NmuCI GTSAC 3 cut(s) 361, 430, 1223
NsiI ATGCAT 1 cut(s) 715
NspV TTCGAA 1 cut(s) 198
OliI CACNNNNGTG 1 cut(s) 491
PagI TCATGA 1 cut(s) 924
PceI AGGCCT 1 cut(s) 1000
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 1 cut(s) 33
PdmI GAANNNNTTC 1 cut(s) 281
PfeI GAWTC 4 cut(s) 195, 224, 266, 1426
PflMI CCANNNNNTGG 1 cut(s) 1356
PfoI TCCNGGA 2 cut(s) 207, 571
PkrI GCNGC 3 cut(s) 409, 454, 461
PleI GAGTC 1 cut(s) 1027
PpsI GAGTC 1 cut(s) 1027
PpuMI RGGWCCY 1 cut(s) 161
Psp5II RGGWCCY 1 cut(s) 161
Psp6I CCWGG 2 cut(s) 552, 571
PspGI CCWGG 2 cut(s) 552, 571
PspN4I GGNNCC 6 cut(s) 163, 291, 570, 720, 882, 1085
PspPI GGNCC 3 cut(s) 161, 550, 773
PspPPI RGGWCCY 1 cut(s) 161
PstI CTGCAG 1 cut(s) 1174
PsuI RGATCY 2 cut(s) 84, 598
PvuII CAGCTG 1 cut(s) 689
RsaI GTAC 2 cut(s) 830, 882
RsaNI GTAC 2 cut(s) 829, 881
RseI CAYNNNNRTG 2 cut(s) 491, 1253
SaqAI TTAA 5 cut(s) 72, 978, 1130, 1310, 1338
SatI GCNGC 3 cut(s) 408, 453, 460
Sau3AI GATC 4 cut(s) 84, 598, 1207, 1260
Sau96I GGNCC 3 cut(s) 161, 550, 773
SchI GAGTC 1 cut(s) 1028
ScrFI CCNGG 3 cut(s) 209, 554, 573
SduI GDGCHC 1 cut(s) 1088
SexAI ACCWGGT 1 cut(s) 552
SfaNI GCATC 4 cut(s) 226, 660, 700, 724
SfcI CTRYAG 1 cut(s) 1170
SfuI TTCGAA 1 cut(s) 198
SinI GGWCC 2 cut(s) 161, 550
SmiMI CAYNNNNRTG 2 cut(s) 491, 1253
SmlI CTYRAG 1 cut(s) 48
SmoI CTYRAG 1 cut(s) 48
Sse9I AATT 9 cut(s) 10, 423, 663, 782, 904, 979, 993, 1147, 1417
SseBI AGGCCT 1 cut(s) 1000
SspMI CTAG 2 cut(s) 158, 1450
StuI AGGCCT 1 cut(s) 1000
StyD4I CCNGG 3 cut(s) 207, 552, 571
StyI CCWWGG 1 cut(s) 1350
TaaI ACNGT 5 cut(s) 880, 922, 1142, 1223, 1394
TaiI ACGT 1 cut(s) 335
TaqI TCGA 4 cut(s) 193, 198, 708, 945
TasI AATT 9 cut(s) 10, 423, 663, 782, 904, 979, 993, 1147, 1417
TfiI GAWTC 4 cut(s) 195, 224, 266, 1426
Tru1I TTAA 5 cut(s) 72, 978, 1130, 1310, 1338
Tru9I TTAA 5 cut(s) 72, 978, 1130, 1310, 1338
TscAI CASTG 1 cut(s) 1371
TseFI GTSAC 3 cut(s) 361, 430, 1223
TseI GCWGC 3 cut(s) 407, 452, 459
Tsp45I GTSAC 3 cut(s) 361, 430, 1223
TspDTI ATGAA 8 cut(s) 95, 246, 376, 454, 593, 604, 665, 689
TspRI CASTG 1 cut(s) 1371
Van91I CCANNNNNTGG 1 cut(s) 1356
VpaK11BI GGWCC 2 cut(s) 161, 550
XapI RAATTY 3 cut(s) 423, 904, 1147
XcmI CCANNNNNNNNNTGG 1 cut(s) 1115
XmiI GTMKAC 1 cut(s) 1387
XmnI GAANNNNTTC 1 cut(s) 281
XspI CTAG 2 cut(s) 158, 1450
Zsp2I ATGCAT 1 cut(s) 715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.