Rmu_co8313823.1_g000001

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8313823.1
Physical Location & Seq
Reverse (-)
120 .. 752
633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8313823.1_g000001.1.cds

Sequence Viewer

Length: 633 bp
atgggatacagtctttggaaagaagaaacagactgtctccaatggctaaactccaaggcaccaaactctattgtttatgttaattttggcagcattgcggttttgacacccgaacagctgcttgagtttggttggggacttgcaaataccaagcttcccttcttctgggtcattaggcctgacttggtcattggaaagtcggcaatcttgccaccagagtttgaagctgaaaccaaagacagaggtttaatagcaagttggtgcccccaagaacaagtcctaaaccatccatcagttggagggtttctaacacacagtggttggaattcaagcatcgagagtgttacagctggagtgccgatggtgtgttggccattctttgcggaccagcatacaaacagttactacacttgcaatgaatggggaattggcatggagatcaataacaaagtcaagagagacaatgtggagaagattgtcaaggagttaatggagggagaaaagggtaagaagatgaaaaacaaagtcttggagtggaagaaactagcagaagaagccactgctccacatggttcttcatcaaagaacttgaaggatttagtgaatcaagtcctattaaaaaaaggcacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

210

Amino Acids

23.61

Weight (kDa)

6.44

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 58, 261
AccB7I CCANNNNNTGG 1 cut(s) 296
AciI CCGC 2 cut(s) 98, 383
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 1 cut(s) 325
AdeI CACNNNGTG 1 cut(s) 317
AfiI CCNNNNNNNGG 2 cut(s) 165, 296
AgsI TTSAA 3 cut(s) 224, 330, 592
AjuI GAANNNNNNNTTGG 4 cut(s) 143, 175, 411, 443
AluBI AGCT 4 cut(s) 118, 154, 227, 350
AluI AGCT 4 cut(s) 118, 154, 227, 350
Alw26I GTCTC 2 cut(s) 41, 453
AoxI GGCC 2 cut(s) 176, 371
ApeKI GCWGC 2 cut(s) 90, 118
ApoI RAATTY 1 cut(s) 325
AspS9I GGNCC 1 cut(s) 385
AvaII GGWCC 1 cut(s) 385
BaeGI GKGCMC 1 cut(s) 266
BalI TGGCCA 1 cut(s) 373
BanI GGYRCC 2 cut(s) 58, 261
BbvI GCAGC 2 cut(s) 102, 105
BccI CCATC 3 cut(s) 294, 298, 355
BcoDI GTCTC 2 cut(s) 41, 453
BfaI CTAG 1 cut(s) 545
BisI GCNGC 2 cut(s) 91, 119
BlsI GCNGC 2 cut(s) 92, 120
Bme18I GGWCC 1 cut(s) 385
BmgT120I GGNCC 1 cut(s) 385
BmiI GGNNCC 2 cut(s) 60, 263
BmsI GCATC 1 cut(s) 342
BpmI CTGGAG 1 cut(s) 372
BpuEI CTTGAG 1 cut(s) 143
BsaJI CCNNGG 1 cut(s) 54
Bsc4I CCNNNNNNNGG 2 cut(s) 165, 296
Bse3DI GCAATG 2 cut(s) 93, 421
BseDI CCNNGG 1 cut(s) 54
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 2 cut(s) 165, 296
BseMI GCAATG 2 cut(s) 93, 421
BseSI GKGCMC 1 cut(s) 266
BseXI GCAGC 2 cut(s) 102, 105
BshFI GGCC 2 cut(s) 178, 373
BshNI GGYRCC 2 cut(s) 58, 261
BslFI GGGAC 1 cut(s) 150
BslI CCNNNNNNNGG 2 cut(s) 165, 296
BsmAI GTCTC 2 cut(s) 41, 453
BsmFI GGGAC 1 cut(s) 150
BsnI GGCC 2 cut(s) 178, 373
Bsp1286I GDGCHC 1 cut(s) 266
Bsp143I GATC 1 cut(s) 438
BspACI CCGC 2 cut(s) 98, 383
BspANI GGCC 2 cut(s) 178, 373
BspLI GGNNCC 2 cut(s) 60, 263
BspT107I GGYRCC 2 cut(s) 58, 261
BsrDI GCAATG 2 cut(s) 93, 421
BssECI CCNNGG 1 cut(s) 54
BssMI GATC 1 cut(s) 438
BssT1I CCWWGG 1 cut(s) 54
Bst4CI ACNGT 4 cut(s) 11, 35, 317, 401
BstDEI CTNAG 1 cut(s) 630
BstF5I GGATG 1 cut(s) 286
BstKTI GATC 1 cut(s) 441
BstMAI GTCTC 2 cut(s) 41, 453
BstMBI GATC 1 cut(s) 438
BstMWI GCNNNNNNNGC 1 cut(s) 554
BstSLI GKGCMC 1 cut(s) 266
BstV1I GCAGC 2 cut(s) 102, 105
BsuRI GGCC 2 cut(s) 178, 373
BtsCI GGATG 1 cut(s) 286
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 2 cut(s) 322, 558
Cfr13I GGNCC 1 cut(s) 385
CviAII CATG 2 cut(s) 433, 569
CviJI RGCY 8 cut(s) 46, 118, 154, 178, 227, 350, 373, 557
CviKI_1 RGCY 8 cut(s) 46, 118, 154, 178, 227, 350, 373, 557
DdeI CTNAG 1 cut(s) 630
DpnI GATC 1 cut(s) 440
DpnII GATC 1 cut(s) 438
DraIII CACNNNGTG 1 cut(s) 317
EaeI YGGCCR 1 cut(s) 371
Eco130I CCWWGG 1 cut(s) 54
Eco147I AGGCCT 1 cut(s) 178
Eco47I GGWCC 1 cut(s) 385
EcoRI GAATTC 1 cut(s) 325
EcoT14I CCWWGG 1 cut(s) 54
ErhI CCWWGG 1 cut(s) 54
FaeI CATG 2 cut(s) 436, 572
FaiI YATR 4 cut(s) 78, 393, 434, 570
FalI AAGNNNNNCTT 2 cut(s) 143, 175
FaqI GGGAC 1 cut(s) 150
FatI CATG 2 cut(s) 432, 568
Fnu4HI GCNGC 2 cut(s) 91, 119
FokI GGATG 1 cut(s) 273
Fsp4HI GCNGC 2 cut(s) 91, 119
FspBI CTAG 1 cut(s) 545
GluI GCNGC 2 cut(s) 91, 119
GsuI CTGGAG 1 cut(s) 372
HaeIII GGCC 2 cut(s) 178, 373
Hin1II CATG 2 cut(s) 436, 572
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 1 cut(s) 604
Hpy188III TCNNGA 2 cut(s) 337, 454
HpyAV CCTTC 2 cut(s) 169, 586
HpyCH4III ACNGT 4 cut(s) 11, 35, 317, 401
HpyCH4V TGCA 2 cut(s) 143, 414
HpyF10VI GCNNNNNNNGC 1 cut(s) 554
HpyF3I CTNAG 1 cut(s) 630
Hsp92II CATG 2 cut(s) 436, 572
Kzo9I GATC 1 cut(s) 438
LmnI GCTCC 1 cut(s) 568
LpnPI CCDG 5 cut(s) 151, 192, 228, 336, 401
Lsp1109I GCAGC 2 cut(s) 102, 105
LweI GCATC 1 cut(s) 342
MaeI CTAG 1 cut(s) 545
MaeIII GTNAC 2 cut(s) 343, 401
MalI GATC 1 cut(s) 440
MboI GATC 1 cut(s) 438
MboII GAAGA 7 cut(s) 35, 154, 484, 523, 550, 563, 567
MhlI GDGCHC 1 cut(s) 266
MlsI TGGCCA 1 cut(s) 373
MluCI AATT 3 cut(s) 82, 325, 426
MluNI TGGCCA 1 cut(s) 373
MmeI TCCRAC 2 cut(s) 277, 302
MnlI CCTC 3 cut(s) 236, 293, 487
Mox20I TGGCCA 1 cut(s) 373
MscI TGGCCA 1 cut(s) 373
MseI TTAA 4 cut(s) 81, 248, 488, 617
Msp20I TGGCCA 1 cut(s) 373
MspA1I CMGCKG 2 cut(s) 118, 350
MwoI GCNNNNNNNGC 1 cut(s) 554
NdeII GATC 1 cut(s) 438
NlaIII CATG 2 cut(s) 436, 572
NlaIV GGNNCC 2 cut(s) 60, 263
PceI AGGCCT 1 cut(s) 178
PfeI GAWTC 1 cut(s) 604
PflFI GACNNNGTC 1 cut(s) 185
PflMI CCANNNNNTGG 1 cut(s) 296
PkrI GCNGC 2 cut(s) 92, 120
PspN4I GGNNCC 2 cut(s) 60, 263
PspPI GGNCC 1 cut(s) 385
PsyI GACNNNGTC 1 cut(s) 185
PvuII CAGCTG 2 cut(s) 118, 350
SaqAI TTAA 4 cut(s) 81, 248, 488, 617
SatI GCNGC 2 cut(s) 91, 119
Sau3AI GATC 1 cut(s) 438
Sau96I GGNCC 1 cut(s) 385
SduI GDGCHC 1 cut(s) 266
SetI ASST 5 cut(s) 120, 156, 229, 247, 352
SfaNI GCATC 1 cut(s) 342
SinI GGWCC 1 cut(s) 385
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
Sse9I AATT 3 cut(s) 82, 325, 426
SseBI AGGCCT 1 cut(s) 178
SsiI CCGC 2 cut(s) 98, 383
SspMI CTAG 1 cut(s) 545
StuI AGGCCT 1 cut(s) 178
StyI CCWWGG 1 cut(s) 54
TaaI ACNGT 4 cut(s) 11, 35, 317, 401
TaqI TCGA 1 cut(s) 336
TasI AATT 3 cut(s) 82, 325, 426
TfiI GAWTC 1 cut(s) 604
Tru1I TTAA 4 cut(s) 81, 248, 488, 617
Tru9I TTAA 4 cut(s) 81, 248, 488, 617
TscAI CASTG 2 cut(s) 322, 565
TseI GCWGC 2 cut(s) 90, 118
TspDTI ATGAA 3 cut(s) 432, 530, 567
TspRI CASTG 2 cut(s) 322, 565
Tth111I GACNNNGTC 1 cut(s) 185
Van91I CCANNNNNTGG 1 cut(s) 296
VpaK11BI GGWCC 1 cut(s) 385
XapI RAATTY 1 cut(s) 325
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XspI CTAG 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.