Rroxscaffold_2G00094440

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000097
Physical Location & Seq
Reverse (-)
15735568 .. 15737663
2096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094440.1

Sequence Viewer

Length: 1467 bp
ATGACTACCATAGCAGTAAGCAATAAGCCTCATGTTGTATGTATTCCTTTGCCATTTCAGGGCCATATAAAGGCAATGCTTCAGTTGGCGCAACTCCTCCACCATAAAGGTTTTTATATAACCTTTGTCAACACACAGTTCAACCACAAGCGCTTTCTTAAGTATCTTGGACCCAACTCTCTTGATTGCTTGCCTGATTTTCGGTTTGAGACTATTCCGGATGGTCTTCCAAGTTCAGATGAAGATGACACCCAAGACCTCACTTTGCTTTCTGAGGCCGTCAGAACAAATTGCTTGGCTCCGTTTCGTAATCTCCTCAACAAACTGAATGTCAACATGAATCGTCCTGTGACTAGCATTGTCTCGGATGGCTTCCTGACGTTCACAATCACAGTTGCTGAAGAACTTGGAATTCCTATAGCTCAGTTCTTTACTTTGGCGGCAATCGGATTTATGAACTATAAAATACTTCCCACTTTGGTGGAAAAAGGATTTGCACCACTCAAAGATGAGAGCTGTTTAACAAATGAATTTTTGGACACGGTAATAGACTGGGTTCGGGGAGTGAAAGATATCCGTTTAAGGGATCTCTCAGGCTCCTGGAGAACCACAAACCGCGATGACATCTTGTTTAACTTGGCCTTAGAAGCAGTGGAGGGAGCTCATAAAGCTTCAGCAGTTGTTGTTCATACTTTTGAGGCGTTGGAGCCAGATGTTTTGGAAGCTCTCTCCAGCACTGCATCTATGCTTCCACCGGTGTACGCCATTGGCCCTCTCCAATTACTTCTCAATCAGATACCGGAACACCCTTTGAAGTCTCTGGGATACAGTTTACGGAAAGAAGAAACAGACTGCCTCCAATGGCTAAATGATAAGGCACCAAACTCAGTTCTGTATGTGAACTTCGGTAGTTTAGTGGTCATGACACCACAACATCTTATGGAGTTTGCTTGGGGACTTGCAAATAGCAAGCTTCCCTTCCTGTGGGTTATTAGACCAGATTTGGTTGTTGGTCAGTCTACGATTTTGCCGCCTGAGTTTTCCGCTGAAACAAAGGAAAGAGGTCTAATAGCAAGTTGGTGCCCACAAGAGCAAGTGCTTAACCATCCATCAGTTGGAGCATTTTTAACACACAGCGGTTGGAATTCAACCATGGAGAGTATGTCTGCTGGAGTGCCTATGCTCTGTTGGCCATTACTTGCTGACCAGCGGATCAACTGTCGCTATACTTGCTATGAGTGGGGTATTGGCATAGAGATCAGTAATGATGTGAAAAGAGATGAAGTAAAGAAATTGTTTGAAGAGTTAATGGTAGGAGAGAAGGGTAAGGAAATGAAAAATAAGGTCATGGAGTGGAAGAAACTAGCAGAAGAGGCCGCTGGTCCGCTTGGTTCGTCAACCATAACATTAGACAATTTGGTAACACTACTAGAAATGGCTATAGGACATCATCAATTATTGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

488

Amino Acids

54.59

Weight (kDa)

5.37

Isoelectric Point (pI)

33.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 12 - 182 4.8e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 284 - 444 3.2e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 877, 1080
AccB7I CCANNNNNTGG 1 cut(s) 1115
AccI GTMKAC 1 cut(s) 1019
AccII CGCG 1 cut(s) 618
AccIII TCCGGA 1 cut(s) 217
AciI CCGC 8 cut(s) 440, 616, 1031, 1044, 1137, 1210, 1377, 1385
AclWI GGATC 2 cut(s) 594, 1220
AcoI YGGCCR 1 cut(s) 1190
AcsI RAATTY 3 cut(s) 411, 530, 1144
AcuI CTGAAG 3 cut(s) 65, 420, 657
AfaI GTAC 1 cut(s) 761
AfeI AGCGCT 1 cut(s) 152
AfiI CCNNNNNNNGG 5 cut(s) 59, 70, 583, 984, 1115
AflII CTTAAG 1 cut(s) 158
AgeI ACCGGT 1 cut(s) 754
AgsI TTSAA 4 cut(s) 142, 814, 1149, 1301
AjnI CCWGG 1 cut(s) 599
AleI CACNNNNGTG 1 cut(s) 479
AluBI AGCT 6 cut(s) 422, 516, 662, 671, 725, 973
AluI AGCT 6 cut(s) 422, 516, 662, 671, 725, 973
Alw21I GWGCWC 1 cut(s) 664
Alw26I GTCTC 3 cut(s) 203, 367, 822
AlwI GGATC 2 cut(s) 594, 1220
AlwNI CAGNNNCTG 1 cut(s) 398
Aor13HI TCCGGA 1 cut(s) 217
Aor51HI AGCGCT 1 cut(s) 152
AoxI GGCC 6 cut(s) 61, 276, 639, 769, 1190, 1374
ApoI RAATTY 3 cut(s) 411, 530, 1144
ArsI GACNNNNNNTTYG 2 cut(s) 315, 347
AsiGI ACCGGT 1 cut(s) 754
AspLEI GCGC 2 cut(s) 91, 153
AspS9I GGNCC 4 cut(s) 61, 170, 770, 1382
AvaII GGWCC 2 cut(s) 170, 1382
BaeGI GKGCMC 1 cut(s) 1085
BalI TGGCCA 1 cut(s) 1192
BanI GGYRCC 2 cut(s) 877, 1080
BanII GRGCYC 1 cut(s) 664
BarI GAAGNNNNNNTAC 2 cut(s) 887, 919
BbsI GAAGAC 1 cut(s) 218
Bbv12I GWGCWC 1 cut(s) 664
BccI CCATC 4 cut(s) 215, 362, 1113, 1117
BceAI ACGGC 1 cut(s) 263
BciT130I CCWGG 1 cut(s) 601
BciVI GTATCC 1 cut(s) 818
BcoDI GTCTC 3 cut(s) 203, 367, 822
BfaI CTAG 3 cut(s) 354, 1364, 1430
BfmI CTRYAG 2 cut(s) 417, 1440
BfoI RGCGCY 1 cut(s) 154
BfrI CTTAAG 1 cut(s) 158
BfuI GTATCC 1 cut(s) 818
BisI GCNGC 3 cut(s) 441, 1031, 1377
BlsI GCNGC 3 cut(s) 442, 1032, 1378
Bme1390I CCNGG 1 cut(s) 601
Bme18I GGWCC 2 cut(s) 170, 1382
BmgT120I GGNCC 4 cut(s) 61, 170, 770, 1382
BmiI GGNNCC 6 cut(s) 172, 300, 598, 708, 879, 1082
BmrFI CCNGG 1 cut(s) 601
BmrI ACTGGG 1 cut(s) 562
BmsI GCATC 1 cut(s) 749
BmuI ACTGGG 1 cut(s) 562
BpiI GAAGAC 1 cut(s) 218
BpmI CTGGAG 3 cut(s) 622, 715, 1191
BsaJI CCNNGG 1 cut(s) 1152
BsaWI WCCGGW 3 cut(s) 217, 754, 799
BsaXI ACNNNNNCTCC 2 cut(s) 1148, 1178
Bsc4I CCNNNNNNNGG 5 cut(s) 59, 70, 583, 984, 1115
Bse118I RCCGGY 1 cut(s) 754
Bse1I ACTGG 1 cut(s) 557
Bse3DI GCAATG 1 cut(s) 81
BseAI TCCGGA 1 cut(s) 217
BseBI CCWGG 1 cut(s) 601
BseDI CCNNGG 1 cut(s) 1152
BseGI GGATG 3 cut(s) 226, 373, 1105
BseLI CCNNNNNNNGG 5 cut(s) 59, 70, 583, 984, 1115
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 5 cut(s) 264, 437, 606, 900, 1026
BseNI ACTGG 1 cut(s) 557
BseRI GAGGAG 2 cut(s) 86, 305
BseSI GKGCMC 1 cut(s) 1085
Bsh1236I CGCG 1 cut(s) 618
BshFI GGCC 6 cut(s) 63, 278, 641, 771, 1192, 1376
BshNI GGYRCC 2 cut(s) 877, 1080
BshTI ACCGGT 1 cut(s) 754
BsiHKAI GWGCWC 1 cut(s) 664
BsiSI CCGG 3 cut(s) 218, 755, 800
BslFI GGGAC 1 cut(s) 969
BslI CCNNNNNNNGG 5 cut(s) 59, 70, 583, 984, 1115
BsmAI GTCTC 3 cut(s) 203, 367, 822
BsmFI GGGAC 1 cut(s) 969
BsnI GGCC 6 cut(s) 63, 278, 641, 771, 1192, 1376
Bsp1286I GDGCHC 2 cut(s) 664, 1085
Bsp13I TCCGGA 1 cut(s) 217
Bsp143I GATC 3 cut(s) 586, 1212, 1257
Bsp19I CCATGG 1 cut(s) 1152
BspACI CCGC 8 cut(s) 440, 616, 1031, 1044, 1137, 1210, 1377, 1385
BspANI GGCC 6 cut(s) 63, 278, 641, 771, 1192, 1376
BspCNI CTCAG 5 cut(s) 265, 436, 605, 899, 1027
BspEI TCCGGA 1 cut(s) 217
BspFNI CGCG 1 cut(s) 618
BspHI TCATGA 1 cut(s) 921
BspLI GGNNCC 6 cut(s) 172, 300, 598, 708, 879, 1082
BspPI GGATC 2 cut(s) 594, 1220
BspT107I GGYRCC 2 cut(s) 877, 1080
BspTI CTTAAG 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 81
BsrFI RCCGGY 1 cut(s) 754
BsrI ACTGG 1 cut(s) 557
BssAI RCCGGY 1 cut(s) 754
BssECI CCNNGG 1 cut(s) 1152
BssMI GATC 3 cut(s) 586, 1212, 1257
BssT1I CCWWGG 1 cut(s) 1152
Bst2UI CCWGG 1 cut(s) 601
Bst4CI ACNGT 5 cut(s) 138, 394, 544, 830, 1220
Bst6I CTCTTC 2 cut(s) 1296, 1365
BstAFI CTTAAG 1 cut(s) 158
BstC8I GCNNGC 2 cut(s) 191, 971
BstDEI CTNAG 6 cut(s) 273, 423, 592, 643, 886, 1035
BstDSI CCRYGG 1 cut(s) 1152
BstF5I GGATG 3 cut(s) 226, 373, 1105
BstFNI CGCG 1 cut(s) 618
BstH2I RGCGCY 1 cut(s) 154
BstHHI GCGC 2 cut(s) 91, 153
BstKTI GATC 3 cut(s) 589, 1215, 1260
BstMAI GTCTC 3 cut(s) 203, 367, 822
BstMBI GATC 3 cut(s) 586, 1212, 1257
BstMWI GCNNNNNNNGC 5 cut(s) 647, 668, 1189, 1230, 1373
BstNI CCWGG 1 cut(s) 601
BstSCI CCNGG 1 cut(s) 599
BstSFI CTRYAG 2 cut(s) 417, 1440
BstSLI GKGCMC 1 cut(s) 1085
BstUI CGCG 1 cut(s) 618
BstV2I GAAGAC 1 cut(s) 218
BstX2I RGATCY 1 cut(s) 586
BstXI CCANNNNNNTGG 1 cut(s) 481
BstYI RGATCY 1 cut(s) 586
BsuI GTATCC 1 cut(s) 818
BsuRI GGCC 6 cut(s) 63, 278, 641, 771, 1192, 1376
BtgI CCRYGG 1 cut(s) 1152
BtgZI GCGATG 1 cut(s) 633
BtsCI GGATG 3 cut(s) 226, 373, 1105
BtsI GCAGTG 2 cut(s) 657, 735
BtsIMutI CAGTG 2 cut(s) 657, 735
Cac8I GCNNGC 2 cut(s) 191, 971
CaiI CAGNNNCTG 1 cut(s) 398
CciI TCATGA 1 cut(s) 921
CfoI GCGC 2 cut(s) 91, 153
Cfr10I RCCGGY 1 cut(s) 754
Cfr13I GGNCC 4 cut(s) 61, 170, 770, 1382
Csp6I GTAC 1 cut(s) 760
CspAI ACCGGT 1 cut(s) 754
CviAII CATG 5 cut(s) 32, 337, 922, 1153, 1348
CviQI GTAC 1 cut(s) 760
DdeI CTNAG 6 cut(s) 273, 423, 592, 643, 886, 1035
DpnI GATC 3 cut(s) 588, 1214, 1259
DpnII GATC 3 cut(s) 586, 1212, 1257
EaeI YGGCCR 1 cut(s) 1190
Eam1104I CTCTTC 2 cut(s) 1296, 1365
EarI CTCTTC 2 cut(s) 1296, 1365
Ecl136II GAGCTC 1 cut(s) 662
Eco130I CCWWGG 1 cut(s) 1152
Eco24I GRGCYC 1 cut(s) 664
Eco32I GATATC 1 cut(s) 574
Eco47I GGWCC 2 cut(s) 170, 1382
Eco47III AGCGCT 1 cut(s) 152
Eco53kI GAGCTC 1 cut(s) 662
Eco57I CTGAAG 3 cut(s) 65, 420, 657
EcoICRI GAGCTC 1 cut(s) 662
EcoRI GAATTC 2 cut(s) 411, 1144
EcoRII CCWGG 1 cut(s) 599
EcoRV GATATC 1 cut(s) 574
EcoT14I CCWWGG 1 cut(s) 1152
EcoT38I GRGCYC 1 cut(s) 664
ErhI CCWWGG 1 cut(s) 1152
FaeI CATG 5 cut(s) 35, 340, 925, 1156, 1351
FalI AAGNNNNNCTT 2 cut(s) 962, 994
FaqI GGGAC 1 cut(s) 969
FatI CATG 5 cut(s) 31, 336, 921, 1152, 1347
FblI GTMKAC 1 cut(s) 1019
Fnu4HI GCNGC 3 cut(s) 441, 1031, 1377
FokI GGATG 3 cut(s) 233, 380, 1092
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 3 cut(s) 441, 1031, 1377
FspBI CTAG 3 cut(s) 354, 1364, 1430
GlaI GCGC 2 cut(s) 90, 152
GluI GCNGC 3 cut(s) 441, 1031, 1377
GsuI CTGGAG 3 cut(s) 622, 715, 1191
HaeII RGCGCY 1 cut(s) 154
HaeIII GGCC 6 cut(s) 63, 278, 641, 771, 1192, 1376
HapII CCGG 3 cut(s) 218, 755, 800
HhaI GCGC 2 cut(s) 91, 153
Hin1II CATG 5 cut(s) 35, 340, 925, 1156, 1351
Hin6I GCGC 2 cut(s) 89, 151
HinP1I GCGC 2 cut(s) 89, 151
HincII GTYRAC 3 cut(s) 130, 334, 1398
HindII GTYRAC 3 cut(s) 130, 334, 1398
HindIII AAGCTT 2 cut(s) 669, 971
HinfI GANTC 1 cut(s) 340
HpaII CCGG 3 cut(s) 218, 755, 800
Hpy166II GTNNAC 8 cut(s) 130, 334, 384, 760, 833, 901, 1020, 1398
Hpy188I TCNGA 6 cut(s) 238, 274, 284, 367, 449, 795
Hpy188III TCNNGA 4 cut(s) 182, 218, 376, 922
Hpy8I GTNNAC 8 cut(s) 130, 334, 384, 760, 833, 901, 1020, 1398
HpyAV CCTTC 2 cut(s) 988, 1315
HpyCH4III ACNGT 5 cut(s) 138, 394, 544, 830, 1220
HpyCH4IV ACGT 1 cut(s) 380
HpyCH4V TGCA 3 cut(s) 497, 740, 962
HpyF10VI GCNNNNNNNGC 5 cut(s) 647, 668, 1189, 1230, 1373
HpyF3I CTNAG 6 cut(s) 273, 423, 592, 643, 886, 1035
HpySE526I ACGT 1 cut(s) 380
Hsp92II CATG 5 cut(s) 35, 340, 925, 1156, 1351
HspAI GCGC 2 cut(s) 89, 151
Kpn2I TCCGGA 1 cut(s) 217
Kzo9I GATC 3 cut(s) 586, 1212, 1257
LmnI GCTCC 5 cut(s) 304, 602, 659, 706, 1118
LweI GCATC 1 cut(s) 749
MaeI CTAG 3 cut(s) 354, 1364, 1430
MaeII ACGT 1 cut(s) 380
MaeIII GTNAC 2 cut(s) 349, 1420
MalI GATC 3 cut(s) 588, 1214, 1259
MboI GATC 3 cut(s) 586, 1212, 1257
MboII GAAGA 7 cut(s) 218, 254, 413, 854, 1313, 1369, 1382
MflI RGATCY 1 cut(s) 586
MhlI GDGCHC 2 cut(s) 664, 1085
MlsI TGGCCA 1 cut(s) 1192
MluCI AATT 8 cut(s) 289, 411, 530, 779, 1144, 1292, 1414, 1454
MluNI TGGCCA 1 cut(s) 1192
MmeI TCCRAC 3 cut(s) 684, 1096, 1121
Mox20I TGGCCA 1 cut(s) 1192
MroI TCCGGA 1 cut(s) 217
MscI TGGCCA 1 cut(s) 1192
MseI TTAA 7 cut(s) 159, 521, 581, 633, 1101, 1127, 1307
MslI CAYNNNNRTG 1 cut(s) 479
Msp20I TGGCCA 1 cut(s) 1192
MspA1I CMGCKG 4 cut(s) 1046, 1137, 1210, 1379
MspCI CTTAAG 1 cut(s) 158
MspI CCGG 3 cut(s) 218, 755, 800
MspR9I CCNGG 1 cut(s) 601
MvaI CCWGG 1 cut(s) 601
MvnI CGCG 1 cut(s) 618
MwoI GCNNNNNNNGC 5 cut(s) 647, 668, 1189, 1230, 1373
NcoI CCATGG 1 cut(s) 1152
NdeII GATC 3 cut(s) 586, 1212, 1257
NlaIII CATG 5 cut(s) 35, 340, 925, 1156, 1351
NlaIV GGNNCC 6 cut(s) 172, 300, 598, 708, 879, 1082
NmuCI GTSAC 1 cut(s) 349
OliI CACNNNNGTG 1 cut(s) 479
PagI TCATGA 1 cut(s) 921
PfeI GAWTC 1 cut(s) 340
PflMI CCANNNNNTGG 1 cut(s) 1115
PfoI TCCNGGA 1 cut(s) 599
PinAI ACCGGT 1 cut(s) 754
PkrI GCNGC 3 cut(s) 442, 1032, 1378
Psp124BI GAGCTC 1 cut(s) 664
Psp6I CCWGG 1 cut(s) 599
PspGI CCWGG 1 cut(s) 599
PspN4I GGNNCC 6 cut(s) 172, 300, 598, 708, 879, 1082
PspPI GGNCC 4 cut(s) 61, 170, 770, 1382
PstNI CAGNNNCTG 1 cut(s) 398
PsuI RGATCY 1 cut(s) 586
RsaI GTAC 1 cut(s) 761
RsaNI GTAC 1 cut(s) 760
RseI CAYNNNNRTG 1 cut(s) 479
SacI GAGCTC 1 cut(s) 664
SaqAI TTAA 7 cut(s) 159, 521, 581, 633, 1101, 1127, 1307
SatI GCNGC 3 cut(s) 441, 1031, 1377
Sau3AI GATC 3 cut(s) 586, 1212, 1257
Sau96I GGNCC 4 cut(s) 61, 170, 770, 1382
ScrFI CCNGG 1 cut(s) 601
SduI GDGCHC 2 cut(s) 664, 1085
SfaNI GCATC 1 cut(s) 749
SfcI CTRYAG 2 cut(s) 417, 1440
SgrAI CRCCGGYG 1 cut(s) 754
SinI GGWCC 2 cut(s) 170, 1382
SmiMI CAYNNNNRTG 1 cut(s) 479
SmlI CTYRAG 1 cut(s) 158
SmoI CTYRAG 1 cut(s) 158
Sse9I AATT 8 cut(s) 289, 411, 530, 779, 1144, 1292, 1414, 1454
SsiI CCGC 8 cut(s) 440, 616, 1031, 1044, 1137, 1210, 1377, 1385
SspMI CTAG 3 cut(s) 354, 1364, 1430
SstI GAGCTC 1 cut(s) 664
StyD4I CCNGG 1 cut(s) 599
StyI CCWWGG 1 cut(s) 1152
TaaI ACNGT 5 cut(s) 138, 394, 544, 830, 1220
TaiI ACGT 1 cut(s) 383
TasI AATT 8 cut(s) 289, 411, 530, 779, 1144, 1292, 1414, 1454
TauI GCSGC 3 cut(s) 443, 1033, 1379
TfiI GAWTC 1 cut(s) 340
Tru1I TTAA 7 cut(s) 159, 521, 581, 633, 1101, 1127, 1307
Tru9I TTAA 7 cut(s) 159, 521, 581, 633, 1101, 1127, 1307
TscAI CASTG 2 cut(s) 657, 742
TseFI GTSAC 1 cut(s) 349
Tsp45I GTSAC 1 cut(s) 349
TspDTI ATGAA 7 cut(s) 255, 353, 470, 543, 677, 1296, 1349
TspGWI ACGGA 3 cut(s) 291, 566, 850
TspRI CASTG 2 cut(s) 657, 742
Van91I CCANNNNNTGG 1 cut(s) 1115
Vha464I CTTAAG 1 cut(s) 158
VpaK11BI GGWCC 2 cut(s) 170, 1382
XapI RAATTY 3 cut(s) 411, 530, 1144
XcmI CCANNNNNNNNNTGG 1 cut(s) 1112
XmiI GTMKAC 1 cut(s) 1019
XspI CTAG 3 cut(s) 354, 1364, 1430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.