Rmu_sc0002474.1_g000015

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002474.1
OG0000097
Physical Location & Seq
Forward (+)
67693 .. 71802
4110 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002474.1_g000015.1.cds

Sequence Viewer

Length: 2055 bp
atgagttccttagcagtaggcaataagcctcatgttgtctgcattcctttgccatttcagagccatataaaggcaatgcttcagtttgctcaactcctccaccacagaggttttcatataacctttgtcaacacagacttcaaccacaagcgctttcttaaatcccttggacccaactctcttgatcgctttcctgattttcggtttgaaactattccggatggcctcccaagttcagaggaaaaggagtcccaagacatccctttgctttgtgattccctcagaagaaattgcttggctccgttccgtaacctcctcaacaaactgaatggcaatatgaatcttccggtgactagcattgtctcggatggcttcctgacattcaccatcacagttgccaaagaacttggaattcctatagcgcagttctttactttggccgcagttggattcatgagcttcaaaatatttcccactttggtggaaaaaggatttgcaccccttaaagatgagagctgtataacaaatgaattattggacacgttaatagactgggttccgggagtgaaagatatccgtataagggatctctcaggctcctggagaaccacaaaccccgatgacatctcgtttaacttcgccttagaagcagtggagggagctcataaagcttcggcagttattgttcatacttttgaggcgttggagccagatgttttggaagctctatccagcactacatctatgcttccacctgtttacgccattggccctctccaattacttctcaatcagataccggaacaccctttgaagtctgttggatacagtttacggaaagaagaaaccgagtgcctccattggctaaatggtaagataccaaactcagttgtgtatgtgaactttgggagtgtagtggtcatgacacctcaacatctcattgagtttgcttggggacttgcaaatagcaagcttccattcttgtgggttattagacctgatttggttgctggtaaatctgcaattttgccacctgagtttgtagctgaaacaaaggaaagaggtctaacagcaagttggtgtccccaagaccaagtgctcaaccatccatcaattggaggatttttaacacacagcggttggaattcaaccatggagagtatttctgctggagttccgatgctctgttggccattaattggtgaccagcggatcaactgtcgctatacttgctatgagtggggtattggcatggagatcaataatgatgtgaagggagacgaagtacagaaactcattgaagagttaatggtaggagagaaggctaagaaactgaaaaataaggtcatggagtggaagatactagcaaaagaggccactgctccacttggcagctatggtgcaaggagcacactggcagctgctggtgttcaacatgacgctgccaagatgacttatggttcaacgcagctatggtgcaagtaccggttcttcctgattttagtgcggaaaagcagggcactggacatggagaacgatctgcttcaacaagcacttgctataagtatggcaagctatcatcggagccatataaaggcaatgcttcagttagctcaactcatccaccacagaggttttcatataacctttgtcaacacacagttcaaccataaacgctttcttaagtctcttggacccaactctcttgattgcttgcctgattttcggtttgagactattccggatggtcttccaagttcagatgaagatgacaaccaagacctcactttgctttgtgtggccgtcagaacacattgcttggctccgtttcgtaacctcctcaacaaactgaatgtcaacatgaatcttcctgttgtgacttgcattgtctcggatggtttcctcccattcactatcacagttgctgaagagcttggaattcctatagcgcagttctttactttggcggcagttggattcatgaactttaaagtatttcccactttggttgaaaaaggatttgcacccctcaaaggtaatgaaagcaatatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

684

Amino Acids

76.29

Weight (kDa)

6.41

Isoelectric Point (pI)

36.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1115, 1199
AccIII TCCGGA 2 cut(s) 217, 1741
AciI CCGC 5 cut(s) 441, 1137, 1210, 1507, 1967
AclWI GGATC 2 cut(s) 594, 1220
AcoI YGGCCR 3 cut(s) 438, 1190, 1800
AcsI RAATTY 3 cut(s) 411, 1144, 1938
AcuI CTGAAG 3 cut(s) 65, 1589, 1947
AfaI GTAC 2 cut(s) 1287, 1484
AfeI AGCGCT 1 cut(s) 152
AfiI CCNNNNNNNGG 6 cut(s) 70, 583, 1115, 1199, 1594, 2033
AflII CTTAAG 1 cut(s) 1682
AflIII ACRYGT 1 cut(s) 540
AgeI ACCGGT 1 cut(s) 1485
AjnI CCWGG 1 cut(s) 599
AleI CACNNNNGTG 1 cut(s) 479
Alw21I GWGCWC 3 cut(s) 664, 1101, 1412
Alw26I GTCTC 5 cut(s) 367, 1272, 1692, 1727, 1894
AlwI GGATC 2 cut(s) 594, 1220
AlwNI CAGNNNCTG 2 cut(s) 1424, 1925
Aor13HI TCCGGA 2 cut(s) 217, 1741
Aor51HI AGCGCT 1 cut(s) 152
AoxI GGCC 6 cut(s) 223, 438, 769, 1190, 1374, 1800
ApeKI GCWGC 5 cut(s) 1392, 1418, 1421, 1442, 1468
ApoI RAATTY 3 cut(s) 411, 1144, 1938
ArsI GACNNNNNNTTYG 2 cut(s) 1839, 1871
AseI ATTAAT 1 cut(s) 1196
AsiGI ACCGGT 1 cut(s) 1485
Asp700I GAANNNNTTC 1 cut(s) 213
AspLEI GCGC 3 cut(s) 153, 424, 1951
AspS9I GGNCC 3 cut(s) 170, 770, 1694
AsuC2I CCSGG 1 cut(s) 561
AsuHPI GGTGA 3 cut(s) 361, 376, 1214
AvaII GGWCC 2 cut(s) 170, 1694
BaeGI GKGCMC 1 cut(s) 1522
BalI TGGCCA 1 cut(s) 1192
BanII GRGCYC 1 cut(s) 664
BarI GAAGNNNNNNTAC 2 cut(s) 1475, 1507
BbsI GAAGAC 1 cut(s) 1742
Bbv12I GWGCWC 3 cut(s) 664, 1101, 1412
BbvI GCAGC 5 cut(s) 1404, 1408, 1429, 1430, 1480
BccI CCATC 7 cut(s) 215, 362, 395, 1113, 1117, 1739, 1889
BceAI ACGGC 1 cut(s) 1787
BciT130I CCWGG 1 cut(s) 601
BciVI GTATCC 1 cut(s) 818
BcnI CCSGG 1 cut(s) 561
BcoDI GTCTC 5 cut(s) 367, 1272, 1692, 1727, 1894
BfaI CTAG 2 cut(s) 354, 1364
BfmI CTRYAG 2 cut(s) 417, 1944
BfoI RGCGCY 1 cut(s) 154
BfrI CTTAAG 1 cut(s) 1682
BfuI GTATCC 1 cut(s) 818
BisI GCNGC 7 cut(s) 441, 1393, 1419, 1422, 1443, 1469, 1968
BlsI GCNGC 7 cut(s) 442, 1394, 1420, 1423, 1444, 1470, 1969
Bme1390I CCNGG 2 cut(s) 561, 601
Bme18I GGWCC 2 cut(s) 170, 1694
BmgT120I GGNCC 3 cut(s) 170, 770, 1694
BmiI GGNNCC 8 cut(s) 172, 300, 558, 598, 708, 1586, 1696, 1824
BmrFI CCNGG 2 cut(s) 561, 601
BmrI ACTGGG 1 cut(s) 562
BmsI GCATC 1 cut(s) 1170
BmuI ACTGGG 1 cut(s) 562
BpiI GAAGAC 1 cut(s) 1742
BpmI CTGGAG 2 cut(s) 622, 1191
Bpu10I CCTNAGC 1 cut(s) 10
BpuMI CCSGG 1 cut(s) 561
BsaJI CCNNGG 2 cut(s) 166, 1152
BsaWI WCCGGW 5 cut(s) 217, 346, 799, 1485, 1741
BsaXI ACNNNNNCTCC 2 cut(s) 1269, 1299
Bsc4I CCNNNNNNNGG 6 cut(s) 70, 583, 1115, 1199, 1594, 2033
Bse118I RCCGGY 1 cut(s) 1485
Bse1I ACTGG 3 cut(s) 557, 1419, 1527
Bse3DI GCAATG 3 cut(s) 81, 1605, 1813
BseAI TCCGGA 2 cut(s) 217, 1741
BseBI CCWGG 1 cut(s) 601
BseDI CCNNGG 2 cut(s) 166, 1152
BseGI GGATG 7 cut(s) 226, 258, 373, 1105, 1620, 1750, 1900
BseLI CCNNNNNNNGG 6 cut(s) 70, 583, 1115, 1199, 1594, 2033
BseMI GCAATG 3 cut(s) 81, 1605, 1813
BseMII CTCAG 4 cut(s) 295, 606, 900, 1026
BseNI ACTGG 3 cut(s) 557, 1419, 1527
BseRI GAGGAG 3 cut(s) 86, 305, 1829
BseSI GKGCMC 1 cut(s) 1522
BseXI GCAGC 5 cut(s) 1404, 1408, 1429, 1430, 1480
BshFI GGCC 6 cut(s) 225, 440, 771, 1192, 1376, 1802
BshTI ACCGGT 1 cut(s) 1485
BsiHKAI GWGCWC 3 cut(s) 664, 1101, 1412
BsiSI CCGG 6 cut(s) 218, 347, 560, 800, 1486, 1742
BslFI GGGAC 3 cut(s) 235, 969, 1068
BslI CCNNNNNNNGG 6 cut(s) 70, 583, 1115, 1199, 1594, 2033
BsmAI GTCTC 5 cut(s) 367, 1272, 1692, 1727, 1894
BsmBI CGTCTC 1 cut(s) 1272
BsmFI GGGAC 3 cut(s) 235, 969, 1068
BsmI GAATGC 1 cut(s) 42
BsnI GGCC 6 cut(s) 225, 440, 771, 1192, 1376, 1802
Bsp1286I GDGCHC 4 cut(s) 664, 1101, 1412, 1522
Bsp13I TCCGGA 2 cut(s) 217, 1741
Bsp143I GATC 5 cut(s) 184, 586, 1212, 1257, 1537
Bsp19I CCATGG 1 cut(s) 1152
BspACI CCGC 5 cut(s) 441, 1137, 1210, 1507, 1967
BspANI GGCC 6 cut(s) 225, 440, 771, 1192, 1376, 1802
BspCNI CTCAG 4 cut(s) 294, 605, 899, 1027
BspEI TCCGGA 2 cut(s) 217, 1741
BspHI TCATGA 3 cut(s) 453, 921, 1980
BspLI GGNNCC 8 cut(s) 172, 300, 558, 598, 708, 1586, 1696, 1824
BspPI GGATC 2 cut(s) 594, 1220
BspQI GCTCTTC 1 cut(s) 1923
BspTI CTTAAG 1 cut(s) 1682
BsrDI GCAATG 3 cut(s) 81, 1605, 1813
BsrFI RCCGGY 1 cut(s) 1485
BsrI ACTGG 3 cut(s) 557, 1419, 1527
BssAI RCCGGY 1 cut(s) 1485
BssECI CCNNGG 2 cut(s) 166, 1152
BssMI GATC 5 cut(s) 184, 586, 1212, 1257, 1537
BssT1I CCWWGG 2 cut(s) 166, 1152
Bst2UI CCWGG 1 cut(s) 601
Bst4CI ACNGT 5 cut(s) 394, 830, 1220, 1662, 1921
Bst6I CTCTTC 2 cut(s) 1296, 1923
BstAFI CTTAAG 1 cut(s) 1682
BstC8I GCNNGC 3 cut(s) 971, 1573, 1715
BstDEI CTNAG 7 cut(s) 10, 281, 592, 643, 886, 1035, 1326
BstDSI CCRYGG 1 cut(s) 1152
BstEII GGTNACC 1 cut(s) 1202
BstF5I GGATG 7 cut(s) 226, 258, 373, 1105, 1620, 1750, 1900
BstH2I RGCGCY 1 cut(s) 154
BstHHI GCGC 3 cut(s) 153, 424, 1951
BstKTI GATC 5 cut(s) 187, 589, 1215, 1260, 1540
BstMAI GTCTC 5 cut(s) 367, 1272, 1692, 1727, 1894
BstMBI GATC 5 cut(s) 184, 586, 1212, 1257, 1537
BstMWI GCNNNNNNNGC 5 cut(s) 647, 668, 1189, 1230, 1373
BstNI CCWGG 1 cut(s) 601
BstPI GGTNACC 1 cut(s) 1202
BstSCI CCNGG 2 cut(s) 559, 599
BstSFI CTRYAG 2 cut(s) 417, 1944
BstSLI GKGCMC 1 cut(s) 1522
BstV1I GCAGC 5 cut(s) 1404, 1408, 1429, 1430, 1480
BstV2I GAAGAC 1 cut(s) 1742
BstX2I RGATCY 1 cut(s) 586
BstXI CCANNNNNNTGG 2 cut(s) 481, 984
BstYI RGATCY 1 cut(s) 586
BsuI GTATCC 1 cut(s) 818
BsuRI GGCC 6 cut(s) 225, 440, 771, 1192, 1376, 1802
BtgI CCRYGG 1 cut(s) 1152
BtsCI GGATG 7 cut(s) 226, 258, 373, 1105, 1620, 1750, 1900
BtsI GCAGTG 2 cut(s) 657, 1377
BtsIMutI CAGTG 4 cut(s) 657, 1377, 1412, 1520
Cac8I GCNNGC 3 cut(s) 971, 1573, 1715
CaiI CAGNNNCTG 2 cut(s) 1424, 1925
CciI TCATGA 3 cut(s) 453, 921, 1980
CfoI GCGC 3 cut(s) 153, 424, 1951
Cfr10I RCCGGY 1 cut(s) 1485
Cfr13I GGNCC 3 cut(s) 170, 770, 1694
CseI GACGC 1 cut(s) 1448
Csp6I GTAC 2 cut(s) 1286, 1483
CspAI ACCGGT 1 cut(s) 1485
CspCI CAANNNNNGTGG 2 cut(s) 1990, 2025
CviQI GTAC 2 cut(s) 1286, 1483
DdeI CTNAG 7 cut(s) 10, 281, 592, 643, 886, 1035, 1326
DpnI GATC 5 cut(s) 186, 588, 1214, 1259, 1539
DpnII GATC 5 cut(s) 184, 586, 1212, 1257, 1537
DraI TTTAAA 1 cut(s) 1990
EaeI YGGCCR 3 cut(s) 438, 1190, 1800
Eam1104I CTCTTC 2 cut(s) 1296, 1923
EarI CTCTTC 2 cut(s) 1296, 1923
Ecl136II GAGCTC 1 cut(s) 662
Eco130I CCWWGG 2 cut(s) 166, 1152
Eco24I GRGCYC 1 cut(s) 664
Eco32I GATATC 1 cut(s) 574
Eco47I GGWCC 2 cut(s) 170, 1694
Eco47III AGCGCT 1 cut(s) 152
Eco53kI GAGCTC 1 cut(s) 662
Eco57I CTGAAG 3 cut(s) 65, 1589, 1947
Eco91I GGTNACC 1 cut(s) 1202
EcoICRI GAGCTC 1 cut(s) 662
EcoO65I GGTNACC 1 cut(s) 1202
EcoRI GAATTC 3 cut(s) 411, 1144, 1938
EcoRII CCWGG 1 cut(s) 599
EcoRV GATATC 1 cut(s) 574
EcoT14I CCWWGG 2 cut(s) 166, 1152
EcoT38I GRGCYC 1 cut(s) 664
ErhI CCWWGG 2 cut(s) 166, 1152
Esp3I CGTCTC 1 cut(s) 1272
FaqI GGGAC 3 cut(s) 235, 969, 1068
Fnu4HI GCNGC 7 cut(s) 441, 1393, 1419, 1422, 1443, 1469, 1968
FokI GGATG 7 cut(s) 233, 245, 380, 1092, 1607, 1757, 1907
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 7 cut(s) 441, 1393, 1419, 1422, 1443, 1469, 1968
FspBI CTAG 2 cut(s) 354, 1364
GlaI GCGC 3 cut(s) 152, 423, 1950
GluI GCNGC 7 cut(s) 441, 1393, 1419, 1422, 1443, 1469, 1968
GsuI CTGGAG 2 cut(s) 622, 1191
HaeII RGCGCY 1 cut(s) 154
HaeIII GGCC 6 cut(s) 225, 440, 771, 1192, 1376, 1802
HapII CCGG 6 cut(s) 218, 347, 560, 800, 1486, 1742
HgaI GACGC 1 cut(s) 1448
HhaI GCGC 3 cut(s) 153, 424, 1951
Hin6I GCGC 3 cut(s) 151, 422, 1949
HinP1I GCGC 3 cut(s) 151, 422, 1949
HincII GTYRAC 3 cut(s) 130, 1654, 1858
HindII GTYRAC 3 cut(s) 130, 1654, 1858
HindIII AAGCTT 2 cut(s) 669, 971
HinfI GANTC 6 cut(s) 248, 275, 340, 450, 1864, 1977
HpaII CCGG 6 cut(s) 218, 347, 560, 800, 1486, 1742
HphI GGTGA 3 cut(s) 361, 376, 1214
Hpy166II GTNNAC 6 cut(s) 130, 760, 833, 901, 1654, 1858
Hpy8I GTNNAC 6 cut(s) 130, 760, 833, 901, 1654, 1858
HpyAV CCTTC 2 cut(s) 1267, 1315
HpyCH4III ACNGT 5 cut(s) 394, 830, 1220, 1662, 1921
HpyCH4IV ACGT 1 cut(s) 542
HpyCH4V TGCA 8 cut(s) 42, 497, 962, 1022, 1403, 1479, 1884, 2024
HpyF10VI GCNNNNNNNGC 5 cut(s) 647, 668, 1189, 1230, 1373
HpyF3I CTNAG 7 cut(s) 10, 281, 592, 643, 886, 1035, 1326
HpySE526I ACGT 1 cut(s) 542
HspAI GCGC 3 cut(s) 151, 422, 1949
Kpn2I TCCGGA 2 cut(s) 217, 1741
Kzo9I GATC 5 cut(s) 184, 586, 1212, 1257, 1537
LguI GCTCTTC 1 cut(s) 1923
LmnI GCTCC 8 cut(s) 304, 602, 659, 706, 1387, 1407, 1584, 1828
Lsp1109I GCAGC 5 cut(s) 1404, 1408, 1429, 1430, 1480
LweI GCATC 1 cut(s) 1170
MaeI CTAG 2 cut(s) 354, 1364
MaeII ACGT 1 cut(s) 542
MaeIII GTNAC 5 cut(s) 308, 349, 1202, 1832, 1876
MalI GATC 5 cut(s) 186, 588, 1214, 1259, 1539
MboI GATC 5 cut(s) 184, 586, 1212, 1257, 1537
MfeI CAATTG 1 cut(s) 1113
MflI RGATCY 1 cut(s) 586
MhlI GDGCHC 4 cut(s) 664, 1101, 1412, 1522
MlsI TGGCCA 1 cut(s) 1192
MluCI AATT 9 cut(s) 289, 411, 530, 779, 1023, 1113, 1144, 1197, 1938
MluNI TGGCCA 1 cut(s) 1192
MlyI GAGTC 1 cut(s) 257
MmeI TCCRAC 5 cut(s) 427, 684, 802, 1121, 1954
Mox20I TGGCCA 1 cut(s) 1192
MroI TCCGGA 2 cut(s) 217, 1741
MroXI GAANNNNTTC 1 cut(s) 213
MscI TGGCCA 1 cut(s) 1192
MseI TTAA 9 cut(s) 159, 504, 545, 633, 1127, 1196, 1307, 1683, 1989
MslI CAYNNNNRTG 2 cut(s) 479, 982
Msp20I TGGCCA 1 cut(s) 1192
MspA1I CMGCKG 3 cut(s) 1137, 1210, 1421
MspCI CTTAAG 1 cut(s) 1682
MspI CCGG 6 cut(s) 218, 347, 560, 800, 1486, 1742
MspR9I CCNGG 2 cut(s) 561, 601
MunI CAATTG 1 cut(s) 1113
Mva1269I GAATGC 1 cut(s) 42
MvaI CCWGG 1 cut(s) 601
MwoI GCNNNNNNNGC 5 cut(s) 647, 668, 1189, 1230, 1373
NciI CCSGG 1 cut(s) 561
NcoI CCATGG 1 cut(s) 1152
NdeII GATC 5 cut(s) 184, 586, 1212, 1257, 1537
NlaIV GGNNCC 8 cut(s) 172, 300, 558, 598, 708, 1586, 1696, 1824
NmuCI GTSAC 3 cut(s) 349, 1202, 1876
OliI CACNNNNGTG 1 cut(s) 479
PagI TCATGA 3 cut(s) 453, 921, 1980
PciSI GCTCTTC 1 cut(s) 1923
PctI GAATGC 1 cut(s) 42
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 5 cut(s) 275, 340, 450, 1864, 1977
PflMI CCANNNNNTGG 2 cut(s) 1115, 1199
PfoI TCCNGGA 2 cut(s) 559, 599
PinAI ACCGGT 1 cut(s) 1485
PkrI GCNGC 7 cut(s) 442, 1394, 1420, 1423, 1444, 1470, 1969
PleI GAGTC 1 cut(s) 256
PpsI GAGTC 1 cut(s) 256
PshBI ATTAAT 1 cut(s) 1196
Psp124BI GAGCTC 1 cut(s) 664
Psp6I CCWGG 1 cut(s) 599
PspEI GGTNACC 1 cut(s) 1202
PspGI CCWGG 1 cut(s) 599
PspN4I GGNNCC 8 cut(s) 172, 300, 558, 598, 708, 1586, 1696, 1824
PspPI GGNCC 3 cut(s) 170, 770, 1694
PstNI CAGNNNCTG 2 cut(s) 1424, 1925
PsuI RGATCY 1 cut(s) 586
PvuII CAGCTG 1 cut(s) 1421
RsaI GTAC 2 cut(s) 1287, 1484
RsaNI GTAC 2 cut(s) 1286, 1483
RseI CAYNNNNRTG 2 cut(s) 479, 982
SacI GAGCTC 1 cut(s) 664
SapI GCTCTTC 1 cut(s) 1923
SaqAI TTAA 9 cut(s) 159, 504, 545, 633, 1127, 1196, 1307, 1683, 1989
SatI GCNGC 7 cut(s) 441, 1393, 1419, 1422, 1443, 1469, 1968
Sau3AI GATC 5 cut(s) 184, 586, 1212, 1257, 1537
Sau96I GGNCC 3 cut(s) 170, 770, 1694
SchI GAGTC 1 cut(s) 257
ScrFI CCNGG 2 cut(s) 561, 601
SduI GDGCHC 4 cut(s) 664, 1101, 1412, 1522
SfaNI GCATC 1 cut(s) 1170
SfcI CTRYAG 2 cut(s) 417, 1944
SinI GGWCC 2 cut(s) 170, 1694
SmiMI CAYNNNNRTG 2 cut(s) 479, 982
SmlI CTYRAG 1 cut(s) 1682
SmoI CTYRAG 1 cut(s) 1682
Sse9I AATT 9 cut(s) 289, 411, 530, 779, 1023, 1113, 1144, 1197, 1938
SsiI CCGC 5 cut(s) 441, 1137, 1210, 1507, 1967
SspI AATATT 2 cut(s) 468, 2050
SspMI CTAG 2 cut(s) 354, 1364
SstI GAGCTC 1 cut(s) 664
StyD4I CCNGG 2 cut(s) 559, 599
StyI CCWWGG 2 cut(s) 166, 1152
TaaI ACNGT 5 cut(s) 394, 830, 1220, 1662, 1921
TaiI ACGT 1 cut(s) 545
TasI AATT 9 cut(s) 289, 411, 530, 779, 1023, 1113, 1144, 1197, 1938
TatI WGTACW 1 cut(s) 1285
TauI GCSGC 2 cut(s) 443, 1970
TfiI GAWTC 5 cut(s) 275, 340, 450, 1864, 1977
Tru1I TTAA 9 cut(s) 159, 504, 545, 633, 1127, 1196, 1307, 1683, 1989
Tru9I TTAA 9 cut(s) 159, 504, 545, 633, 1127, 1196, 1307, 1683, 1989
TscAI CASTG 4 cut(s) 657, 1384, 1419, 1527
TseFI GTSAC 3 cut(s) 349, 1202, 1876
TseI GCWGC 5 cut(s) 1392, 1418, 1421, 1442, 1468
Tsp45I GTSAC 3 cut(s) 349, 1202, 1876
TspGWI ACGGA 5 cut(s) 291, 296, 566, 850, 1815
TspRI CASTG 4 cut(s) 657, 1384, 1419, 1527
Van91I CCANNNNNTGG 2 cut(s) 1115, 1199
Vha464I CTTAAG 1 cut(s) 1682
VpaK11BI GGWCC 2 cut(s) 170, 1694
VspI ATTAAT 1 cut(s) 1196
XapI RAATTY 3 cut(s) 411, 1144, 1938
XcmI CCANNNNNNNNNTGG 2 cut(s) 866, 1112
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 2 cut(s) 354, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.