pycom09g06280

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
4644576 .. 4644963
388 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g06280.2

Sequence Viewer

Length: 348 bp
ATGACACCTGAACATCTTGTCGAGTTTGGCTGGGGACTTGCAAAGAGCAAGGTGCCCTTCTTTTGGGTAATTAGACCTGATTTAGTTATTGGCCAATCAGCACTTTTGCCGCTGGAGTTTGTGGATGAAACAAAAGAAAGAAGTCTCATTGCGAGTTGGTGCCCACAAGAGCAAGTCCTTAACCACCCATCAGTGGCAGGATTTTTAACACACAGTGGTTGGAATTCAACCCTTGAGAGCCTCACTGCAGGAGTGCCTATGCTCTGTTGGCCATTCTTCGGCGACCAGCAGATGGACTGCCGCTATAGTTGCAATGAATGGGGCATTGGCATGGAAATTAAGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

116

Amino Acids

13.0

Weight (kDa)

4.84

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 52, 159
AccB7I CCANNNNNTGG 1 cut(s) 292
AciI CCGC 2 cut(s) 110, 301
AcoI YGGCCR 2 cut(s) 91, 269
AcsI RAATTY 1 cut(s) 223
AdeI CACNNNGTG 1 cut(s) 215
AfiI CCNNNNNNNGG 4 cut(s) 63, 193, 278, 292
AgsI TTSAA 1 cut(s) 228
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
Alw26I GTCTC 1 cut(s) 149
AoxI GGCC 2 cut(s) 91, 269
ApoI RAATTY 1 cut(s) 223
BaeGI GKGCMC 2 cut(s) 57, 164
BalI TGGCCA 2 cut(s) 93, 271
BanI GGYRCC 2 cut(s) 52, 159
BccI CCATC 2 cut(s) 196, 286
BcoDI GTCTC 1 cut(s) 149
BfmI CTRYAG 2 cut(s) 246, 304
BisI GCNGC 2 cut(s) 110, 301
BlsI GCNGC 2 cut(s) 111, 302
BmiI GGNNCC 2 cut(s) 54, 161
BpmI CTGGAG 1 cut(s) 134
BpuEI CTTGAG 1 cut(s) 254
Bsc4I CCNNNNNNNGG 4 cut(s) 63, 193, 278, 292
Bse3DI GCAATG 2 cut(s) 147, 319
BseGI GGATG 1 cut(s) 130
BseLI CCNNNNNNNGG 4 cut(s) 63, 193, 278, 292
BseMI GCAATG 2 cut(s) 147, 319
BseSI GKGCMC 2 cut(s) 57, 164
BseYI CCCAGC 1 cut(s) 30
BshFI GGCC 2 cut(s) 93, 271
BshNI GGYRCC 2 cut(s) 52, 159
BslFI GGGAC 1 cut(s) 48
BslI CCNNNNNNNGG 4 cut(s) 63, 193, 278, 292
BsmAI GTCTC 1 cut(s) 149
BsmFI GGGAC 1 cut(s) 48
BsnI GGCC 2 cut(s) 93, 271
Bsp1286I GDGCHC 2 cut(s) 57, 164
BspACI CCGC 2 cut(s) 110, 301
BspANI GGCC 2 cut(s) 93, 271
BspLI GGNNCC 2 cut(s) 54, 161
BspMAI CTGCAG 1 cut(s) 250
BspT107I GGYRCC 2 cut(s) 52, 159
BsrDI GCAATG 2 cut(s) 147, 319
Bst4CI ACNGT 1 cut(s) 215
BstF5I GGATG 1 cut(s) 130
BstMAI GTCTC 1 cut(s) 149
BstMWI GCNNNNNNNGC 2 cut(s) 268, 309
BstSFI CTRYAG 2 cut(s) 246, 304
BstSLI GKGCMC 2 cut(s) 57, 164
BsuRI GGCC 2 cut(s) 93, 271
BtsCI GGATG 1 cut(s) 130
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 3 cut(s) 198, 220, 243
CviAII CATG 1 cut(s) 331
CviJI RGCY 4 cut(s) 30, 93, 240, 271
CviKI_1 RGCY 4 cut(s) 30, 93, 240, 271
DraIII CACNNNGTG 1 cut(s) 215
EaeI YGGCCR 2 cut(s) 91, 269
EcoRI GAATTC 1 cut(s) 223
FaeI CATG 1 cut(s) 334
FaiI YATR 3 cut(s) 260, 306, 332
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FaqI GGGAC 1 cut(s) 48
FatI CATG 1 cut(s) 330
Fnu4HI GCNGC 2 cut(s) 110, 301
FokI GGATG 1 cut(s) 137
Fsp4HI GCNGC 2 cut(s) 110, 301
GluI GCNGC 2 cut(s) 110, 301
GsaI CCCAGC 1 cut(s) 34
GsuI CTGGAG 1 cut(s) 134
HaeIII GGCC 2 cut(s) 93, 271
Hin1II CATG 1 cut(s) 334
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 1 cut(s) 215
HpyCH4V TGCA 3 cut(s) 41, 248, 312
HpyF10VI GCNNNNNNNGC 2 cut(s) 268, 309
Hsp92II CATG 1 cut(s) 334
LpnPI CCDG 7 cut(s) 16, 21, 90, 98, 183, 234, 299
MboII GAAGA 1 cut(s) 268
MhlI GDGCHC 2 cut(s) 57, 164
MlsI TGGCCA 2 cut(s) 93, 271
MluCI AATT 3 cut(s) 69, 223, 336
MluNI TGGCCA 2 cut(s) 93, 271
MmeI TCCRAC 1 cut(s) 200
MnlI CCTC 1 cut(s) 251
Mox20I TGGCCA 2 cut(s) 93, 271
MscI TGGCCA 2 cut(s) 93, 271
MseI TTAA 4 cut(s) 180, 206, 339, 346
MslI CAYNNNNRTG 1 cut(s) 329
Msp20I TGGCCA 2 cut(s) 93, 271
MspA1I CMGCKG 1 cut(s) 112
MwoI GCNNNNNNNGC 2 cut(s) 268, 309
NlaIII CATG 1 cut(s) 334
NlaIV GGNNCC 2 cut(s) 54, 161
PflMI CCANNNNNTGG 1 cut(s) 292
PkrI GCNGC 2 cut(s) 111, 302
PspFI CCCAGC 1 cut(s) 30
PspN4I GGNNCC 2 cut(s) 54, 161
PstI CTGCAG 1 cut(s) 250
RseI CAYNNNNRTG 1 cut(s) 329
SaqAI TTAA 4 cut(s) 180, 206, 339, 346
SatI GCNGC 2 cut(s) 110, 301
SduI GDGCHC 2 cut(s) 57, 164
SetI ASST 3 cut(s) 10, 54, 79
SfcI CTRYAG 2 cut(s) 246, 304
SmiMI CAYNNNNRTG 1 cut(s) 329
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 3 cut(s) 69, 223, 336
SsiI CCGC 2 cut(s) 110, 301
TaaI ACNGT 1 cut(s) 215
TaqI TCGA 1 cut(s) 21
TasI AATT 3 cut(s) 69, 223, 336
TauI GCSGC 2 cut(s) 112, 303
Tru1I TTAA 4 cut(s) 180, 206, 339, 346
Tru9I TTAA 4 cut(s) 180, 206, 339, 346
TscAI CASTG 3 cut(s) 198, 220, 250
TspDTI ATGAA 2 cut(s) 141, 330
TspRI CASTG 3 cut(s) 198, 220, 250
Van91I CCANNNNNTGG 1 cut(s) 292
XapI RAATTY 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.