FvH4_6g39813

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000097
Physical Location & Seq
Forward (+)
31432766 .. 31434567
1802 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39813.t1

Sequence Viewer

Length: 1440 bp
ATGGACAGTATTAAGCCTCATGCTGTGTTTATTCCAGTTCCAGCTCAAAGCCATATAAAGGCAATGCTTAAACTAGCGAAAATCCTCCATCATAGAGGCTTTCACATTACCTTTGTCAACACAGAGTTCAATCACAAGCGATTTCTTAAGTCTCTAGGACCCAACTCCCTTGACGGCTTGCCTGATTTTCGGTTCGAAGCCATTCCAGATGGGCTTCCAGAATCGGATGAAGATGCCACCCAAGATGTCGCTTTGCTTTGTGACTGTATCAACAAAAATTTCCTAGCTACTTTTTGTGCCCTTATTATGAAACTGAACAATAGTACTAATCCTCCTGTGAGTTGTATAGTTTCAGATGGTTTTATGTCGACATTCACCATCACAGCTGCTGAAGAATTTGGAGTTCCAGTAGCATTGTTCTACACCATTGCTGCTTGCAGCTTGATGGGGTTTACACAATATCCCAGTTTGATCGACAAAGGACTTGCACCACTTAAAGATGAGAGCTGCTTCACCAATGGGTTTTTAGACACGGTAATAGACTGGATTCCAGGAATGAAAGATATTCGTTTAAGGGATCTACCATCCTTCTTTCGAACAACAAATCCCGACGACATCATTTTTAACTACTTCATCGAAGCAACAGGCCCAAGAATTCAGAAGGCTTCAGCTATTGTTCTCCATACATTTGATGCATTGGAACAAAATGTTTTGGATGCTCTCTCATCTAGGCTTCCACTTGTTTATGCCATTGGACCTATCCAATTACTTCTGAATCAGATACCGCAAAACCCTCTGACTTCTATGGGTTACAGTCTATGGAAAGAAGAACCTGAGTGCCTTGAATGGCTGAAGAACAGGGCACCAAATTCAGTGATTTATGTGAATTTTGGTAGCGTAGCGGTCTTGACACCAAAACAGCTAGTAGAGTTTGGTTGGGGACTTGCAAACAGCAAGTTTCCTTTCTTCTGGGTGATAAGACCTGATCTGGTTGTTGGCGAGTCGGCAATTTTGCCACCTGAATTTGTAGCTGAGATCAAAGATAGAGGGCTGCTAGCACATTGGTGCCCACAAGAGCAAGTACTCAACCATCCATCCGTTGGAGGGTTTCTAACACACAGTGGCTGGAACTCAACCATTGAGAGTTTGACGGCCGGAGTGCCTATGTTGTGTTGGCCATTCTTTGGTGACCAGCAAACAGATTGTCACTTCAGTTGCAAGGAATGGGGTGTTGGCATGGAGATCAGTAACGATGTCAAGAGAGACGAAGTAGAGAAGCTTGTGAAAGAGTTAATGGAGGGAGAGAAGGGCAAGAAAATGAAAAACAAGGCCTTGAATTGGAAAGAACTTGCTCAAGAAGCCACTGCTCCCCATGGCACTTCATCCAGAAACTTGGACACTTTAGTGAATCAAGTGCTACTAAGGAAAAGCCAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

480

Amino Acids

53.52

Weight (kDa)

5.51

Isoelectric Point (pI)

40.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 288 - 439 2.6e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 862, 1065
AccB7I CCANNNNNTGG 2 cut(s) 1100, 1184
AccI GTMKAC 1 cut(s) 368
AciI CCGC 2 cut(s) 785, 902
AclWI GGATC 1 cut(s) 585
AcoI YGGCCR 2 cut(s) 1152, 1175
AcsI RAATTY 6 cut(s) 277, 395, 654, 868, 886, 1022
AcuI CTGAAG 4 cut(s) 411, 651, 872, 1195
AdeI CACNNNGTG 1 cut(s) 1121
AfaI GTAC 2 cut(s) 325, 1083
AfiI CCNNNNNNNGG 5 cut(s) 58, 1100, 1104, 1184, 1338
AflII CTTAAG 1 cut(s) 146
AgsI TTSAA 3 cut(s) 130, 845, 1336
AjnI CCWGG 1 cut(s) 550
AjuI GAANNNNNNNTTGG 2 cut(s) 1215, 1247
AleI CACNNNNGTG 2 cut(s) 1063, 1403
AloI GAACNNNNNNTCC 2 cut(s) 589, 621
AluBI AGCT 9 cut(s) 44, 287, 386, 441, 507, 671, 922, 1031, 1279
AluI AGCT 9 cut(s) 44, 287, 386, 441, 507, 671, 922, 1031, 1279
Alw26I GTCTC 2 cut(s) 156, 1257
AlwI GGATC 1 cut(s) 585
AlwNI CAGNNNCTG 2 cut(s) 389, 1125
AoxI GGCC 4 cut(s) 646, 1152, 1175, 1329
ApeKI GCWGC 5 cut(s) 386, 431, 438, 507, 1051
ApoI RAATTY 6 cut(s) 277, 395, 654, 868, 886, 1022
ArsI GACNNNNNNTTYG 2 cut(s) 1189, 1221
Asp700I GAANNNNTTC 1 cut(s) 201
AspS9I GGNCC 3 cut(s) 158, 647, 755
AsuHPI GGTGA 4 cut(s) 367, 505, 985, 1199
AsuII TTCGAA 2 cut(s) 195, 595
AsuNHI GCTAGC 1 cut(s) 1054
AvaII GGWCC 2 cut(s) 158, 755
BaeGI GKGCMC 3 cut(s) 301, 865, 1070
BalI TGGCCA 1 cut(s) 1177
BanI GGYRCC 2 cut(s) 862, 1065
BbvI GCAGC 5 cut(s) 373, 418, 450, 494, 1038
BccI CCATC 8 cut(s) 96, 203, 350, 386, 439, 592, 1098, 1102
BceAI ACGGC 2 cut(s) 190, 1167
BciT130I CCWGG 1 cut(s) 552
BcoDI GTCTC 2 cut(s) 156, 1257
BfaI CTAG 6 cut(s) 74, 155, 284, 729, 923, 1055
BfrI CTTAAG 1 cut(s) 146
BisI GCNGC 5 cut(s) 387, 432, 439, 508, 1052
BlsI GCNGC 5 cut(s) 388, 433, 440, 509, 1053
BmcAI AGTACT 2 cut(s) 325, 1083
Bme1390I CCNGG 1 cut(s) 552
Bme18I GGWCC 2 cut(s) 158, 755
BmgT120I GGNCC 3 cut(s) 158, 647, 755
BmiI GGNNCC 3 cut(s) 160, 864, 1067
BmrFI CCNGG 1 cut(s) 552
BmrI ACTGGG 1 cut(s) 459
BmsI GCATC 3 cut(s) 223, 682, 706
BmtI GCTAGC 1 cut(s) 1058
BmuI ACTGGG 1 cut(s) 459
Bpu14I TTCGAA 2 cut(s) 195, 595
BpuEI CTTGAG 1 cut(s) 1338
BsaJI CCNNGG 1 cut(s) 1372
BsaXI ACNNNNNCTCC 4 cut(s) 316, 346, 393, 423
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 1100, 1104, 1184, 1338
Bse1I ACTGG 4 cut(s) 35, 407, 465, 548
Bse3DI GCAATG 2 cut(s) 69, 426
BseBI CCWGG 1 cut(s) 552
BseDI CCNNGG 1 cut(s) 1372
BseGI GGATG 6 cut(s) 232, 584, 721, 1090, 1094, 1382
BseLI CCNNNNNNNGG 5 cut(s) 58, 1100, 1104, 1184, 1338
BseMI GCAATG 2 cut(s) 69, 426
BseMII CTCAG 2 cut(s) 825, 1023
BseNI ACTGG 4 cut(s) 35, 407, 465, 548
BseSI GKGCMC 3 cut(s) 301, 865, 1070
BseX3I CGGCCG 1 cut(s) 1152
BseXI GCAGC 5 cut(s) 373, 418, 450, 494, 1038
Bsh1285I CGRYCG 1 cut(s) 1155
BshFI GGCC 4 cut(s) 648, 1154, 1177, 1331
BshNI GGYRCC 2 cut(s) 862, 1065
BsiEI CGRYCG 1 cut(s) 1155
BsiSI CCGG 1 cut(s) 1155
BslFI GGGAC 1 cut(s) 954
BslI CCNNNNNNNGG 5 cut(s) 58, 1100, 1104, 1184, 1338
BsmAI GTCTC 2 cut(s) 156, 1257
BsmBI CGTCTC 1 cut(s) 1257
BsmFI GGGAC 1 cut(s) 954
BsnI GGCC 4 cut(s) 648, 1154, 1177, 1331
Bsp119I TTCGAA 2 cut(s) 195, 595
Bsp1286I GDGCHC 3 cut(s) 301, 865, 1070
Bsp143I GATC 5 cut(s) 471, 577, 985, 1035, 1242
Bsp19I CCATGG 1 cut(s) 1372
BspACI CCGC 2 cut(s) 785, 902
BspANI GGCC 4 cut(s) 648, 1154, 1177, 1331
BspCNI CTCAG 2 cut(s) 826, 1024
BspLI GGNNCC 3 cut(s) 160, 864, 1067
BspOI GCTAGC 1 cut(s) 1058
BspPI GGATC 1 cut(s) 585
BspT104I TTCGAA 2 cut(s) 195, 595
BspT107I GGYRCC 2 cut(s) 862, 1065
BspTI CTTAAG 1 cut(s) 146
BsrDI GCAATG 2 cut(s) 69, 426
BsrI ACTGG 4 cut(s) 35, 407, 465, 548
BssECI CCNNGG 1 cut(s) 1372
BssMI GATC 5 cut(s) 471, 577, 985, 1035, 1242
BssT1I CCWWGG 1 cut(s) 1372
Bst2UI CCWGG 1 cut(s) 552
Bst4CI ACNGT 5 cut(s) 8, 266, 535, 815, 1121
BstAFI CTTAAG 1 cut(s) 146
BstBI TTCGAA 2 cut(s) 195, 595
BstC8I GCNNGC 3 cut(s) 179, 436, 1056
BstDEI CTNAG 3 cut(s) 834, 1032, 1421
BstDSI CCRYGG 1 cut(s) 1372
BstEII GGTNACC 1 cut(s) 1187
BstF5I GGATG 6 cut(s) 232, 584, 721, 1090, 1094, 1382
BstKTI GATC 5 cut(s) 474, 580, 988, 1038, 1245
BstMAI GTCTC 2 cut(s) 156, 1257
BstMBI GATC 5 cut(s) 471, 577, 985, 1035, 1242
BstMCI CGRYCG 1 cut(s) 1155
BstMWI GCNNNNNNNGC 1 cut(s) 1358
BstNI CCWGG 1 cut(s) 552
BstPI GGTNACC 1 cut(s) 1187
BstSCI CCNGG 1 cut(s) 550
BstSLI GKGCMC 3 cut(s) 301, 865, 1070
BstV1I GCAGC 5 cut(s) 373, 418, 450, 494, 1038
BstX2I RGATCY 1 cut(s) 577
BstXI CCANNNNNNTGG 1 cut(s) 1393
BstYI RGATCY 1 cut(s) 577
BstZI CGGCCG 1 cut(s) 1152
BsuRI GGCC 4 cut(s) 648, 1154, 1177, 1331
BtgI CCRYGG 1 cut(s) 1372
BtsCI GGATG 6 cut(s) 232, 584, 721, 1090, 1094, 1382
BtsI GCAGTG 1 cut(s) 1362
BtsIMutI CAGTG 3 cut(s) 879, 1126, 1362
Cac8I GCNNGC 3 cut(s) 179, 436, 1056
CaiI CAGNNNCTG 2 cut(s) 389, 1125
Cfr13I GGNCC 3 cut(s) 158, 647, 755
Csp6I GTAC 2 cut(s) 324, 1082
CviAII CATG 3 cut(s) 20, 1237, 1373
CviQI GTAC 2 cut(s) 324, 1082
DdeI CTNAG 3 cut(s) 834, 1032, 1421
DpnI GATC 5 cut(s) 473, 579, 987, 1037, 1244
DpnII GATC 5 cut(s) 471, 577, 985, 1035, 1242
DraIII CACNNNGTG 1 cut(s) 1121
EaeI YGGCCR 2 cut(s) 1152, 1175
EagI CGGCCG 1 cut(s) 1152
EclXI CGGCCG 1 cut(s) 1152
Eco130I CCWWGG 1 cut(s) 1372
Eco147I AGGCCT 1 cut(s) 1331
Eco47I GGWCC 2 cut(s) 158, 755
Eco52I CGGCCG 1 cut(s) 1152
Eco57I CTGAAG 4 cut(s) 411, 651, 872, 1195
Eco91I GGTNACC 1 cut(s) 1187
EcoO109I RGGNCCY 1 cut(s) 158
EcoO65I GGTNACC 1 cut(s) 1187
EcoRI GAATTC 1 cut(s) 654
EcoRII CCWGG 1 cut(s) 550
EcoT14I CCWWGG 1 cut(s) 1372
EcoT22I ATGCAT 1 cut(s) 697
ErhI CCWWGG 1 cut(s) 1372
Esp3I CGTCTC 1 cut(s) 1257
FaeI CATG 3 cut(s) 23, 1240, 1376
FaqI GGGAC 1 cut(s) 954
FatI CATG 3 cut(s) 19, 1236, 1372
FblI GTMKAC 1 cut(s) 368
Fnu4HI GCNGC 5 cut(s) 387, 432, 439, 508, 1052
FokI GGATG 6 cut(s) 239, 571, 728, 1077, 1081, 1369
Fsp4HI GCNGC 5 cut(s) 387, 432, 439, 508, 1052
FspBI CTAG 6 cut(s) 74, 155, 284, 729, 923, 1055
GluI GCNGC 5 cut(s) 387, 432, 439, 508, 1052
HaeIII GGCC 4 cut(s) 648, 1154, 1177, 1331
HapII CCGG 1 cut(s) 1155
Hin1II CATG 3 cut(s) 23, 1240, 1376
HincII GTYRAC 2 cut(s) 118, 369
HindII GTYRAC 2 cut(s) 118, 369
HindIII AAGCTT 1 cut(s) 1277
HinfI GANTC 5 cut(s) 221, 547, 775, 1001, 1408
HpaII CCGG 1 cut(s) 1155
HphI GGTGA 4 cut(s) 367, 505, 985, 1199
Hpy166II GTNNAC 3 cut(s) 118, 369, 453
Hpy188I TCNGA 6 cut(s) 226, 355, 660, 774, 780, 798
Hpy188III TCNNGA 7 cut(s) 206, 218, 608, 907, 1258, 1355, 1386
Hpy8I GTNNAC 3 cut(s) 118, 369, 453
Hpy99I CGWCG 1 cut(s) 614
HpyAV CCTTC 3 cut(s) 598, 655, 1300
HpyCH4III ACNGT 5 cut(s) 8, 266, 535, 815, 1121
HpyCH4V TGCA 5 cut(s) 438, 488, 695, 947, 1218
HpyF10VI GCNNNNNNNGC 1 cut(s) 1358
HpyF3I CTNAG 3 cut(s) 834, 1032, 1421
Hsp92II CATG 3 cut(s) 23, 1240, 1376
Kzo9I GATC 5 cut(s) 471, 577, 985, 1035, 1242
LmnI GCTCC 1 cut(s) 1372
Lsp1109I GCAGC 5 cut(s) 373, 418, 450, 494, 1038
LweI GCATC 3 cut(s) 223, 682, 706
MaeI CTAG 6 cut(s) 74, 155, 284, 729, 923, 1055
MaeIII GTNAC 5 cut(s) 260, 809, 1187, 1205, 1247
MalI GATC 5 cut(s) 473, 579, 987, 1037, 1244
MboI GATC 5 cut(s) 471, 577, 985, 1035, 1242
MboII GAAGA 5 cut(s) 242, 404, 839, 865, 958
MflI RGATCY 1 cut(s) 577
MhlI GDGCHC 3 cut(s) 301, 865, 1070
MlsI TGGCCA 1 cut(s) 1177
MluCI AATT 9 cut(s) 277, 395, 654, 764, 868, 886, 1008, 1022, 1336
MluNI TGGCCA 1 cut(s) 1177
MlyI GAGTC 1 cut(s) 1010
MmeI TCCRAC 1 cut(s) 1081
MnlI CCTC 8 cut(s) 27, 89, 95, 342, 804, 1040, 1097, 1291
Mox20I TGGCCA 1 cut(s) 1177
Mph1103I ATGCAT 1 cut(s) 697
MroXI GAANNNNTTC 1 cut(s) 201
MscI TGGCCA 1 cut(s) 1177
MseI TTAA 7 cut(s) 12, 69, 147, 495, 572, 624, 1292
MslI CAYNNNNRTG 2 cut(s) 1063, 1403
Msp20I TGGCCA 1 cut(s) 1177
MspA1I CMGCKG 1 cut(s) 386
MspCI CTTAAG 1 cut(s) 146
MspI CCGG 1 cut(s) 1155
MspR9I CCNGG 1 cut(s) 552
MvaI CCWGG 1 cut(s) 552
MwoI GCNNNNNNNGC 1 cut(s) 1358
NcoI CCATGG 1 cut(s) 1372
NdeII GATC 5 cut(s) 471, 577, 985, 1035, 1242
NheI GCTAGC 1 cut(s) 1054
NlaIII CATG 3 cut(s) 23, 1240, 1376
NlaIV GGNNCC 3 cut(s) 160, 864, 1067
NmuCI GTSAC 3 cut(s) 260, 1187, 1205
NsiI ATGCAT 1 cut(s) 697
NspV TTCGAA 2 cut(s) 195, 595
OliI CACNNNNGTG 2 cut(s) 1063, 1403
PceI AGGCCT 1 cut(s) 1331
PdmI GAANNNNTTC 1 cut(s) 201
PfeI GAWTC 4 cut(s) 221, 547, 775, 1408
PflMI CCANNNNNTGG 2 cut(s) 1100, 1184
PfoI TCCNGGA 1 cut(s) 550
PkrI GCNGC 5 cut(s) 388, 433, 440, 509, 1053
PleI GAGTC 1 cut(s) 1009
PpsI GAGTC 1 cut(s) 1009
PpuMI RGGWCCY 1 cut(s) 158
Psp5II RGGWCCY 1 cut(s) 158
Psp6I CCWGG 1 cut(s) 550
PspEI GGTNACC 1 cut(s) 1187
PspGI CCWGG 1 cut(s) 550
PspN4I GGNNCC 3 cut(s) 160, 864, 1067
PspPI GGNCC 3 cut(s) 158, 647, 755
PspPPI RGGWCCY 1 cut(s) 158
PstNI CAGNNNCTG 2 cut(s) 389, 1125
PsuI RGATCY 1 cut(s) 577
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 2 cut(s) 325, 1083
RsaNI GTAC 2 cut(s) 324, 1082
RseI CAYNNNNRTG 2 cut(s) 1063, 1403
SalI GTCGAC 1 cut(s) 367
SaqAI TTAA 7 cut(s) 12, 69, 147, 495, 572, 624, 1292
SatI GCNGC 5 cut(s) 387, 432, 439, 508, 1052
Sau3AI GATC 5 cut(s) 471, 577, 985, 1035, 1242
Sau96I GGNCC 3 cut(s) 158, 647, 755
ScaI AGTACT 2 cut(s) 325, 1083
SchI GAGTC 1 cut(s) 1010
ScrFI CCNGG 1 cut(s) 552
SduI GDGCHC 3 cut(s) 301, 865, 1070
SfaNI GCATC 3 cut(s) 223, 682, 706
SfuI TTCGAA 2 cut(s) 195, 595
SinI GGWCC 2 cut(s) 158, 755
SmiMI CAYNNNNRTG 2 cut(s) 1063, 1403
SmlI CTYRAG 2 cut(s) 146, 1353
SmoI CTYRAG 2 cut(s) 146, 1353
Sse9I AATT 9 cut(s) 277, 395, 654, 764, 868, 886, 1008, 1022, 1336
SseBI AGGCCT 1 cut(s) 1331
SsiI CCGC 2 cut(s) 785, 902
SspMI CTAG 6 cut(s) 74, 155, 284, 729, 923, 1055
StuI AGGCCT 1 cut(s) 1331
StyD4I CCNGG 1 cut(s) 550
StyI CCWWGG 1 cut(s) 1372
TaaI ACNGT 5 cut(s) 8, 266, 535, 815, 1121
TaqI TCGA 5 cut(s) 195, 368, 474, 595, 636
TasI AATT 9 cut(s) 277, 395, 654, 764, 868, 886, 1008, 1022, 1336
TatI WGTACW 2 cut(s) 323, 1081
TfiI GAWTC 4 cut(s) 221, 547, 775, 1408
Tru1I TTAA 7 cut(s) 12, 69, 147, 495, 572, 624, 1292
Tru9I TTAA 7 cut(s) 12, 69, 147, 495, 572, 624, 1292
TscAI CASTG 3 cut(s) 879, 1126, 1369
TseFI GTSAC 3 cut(s) 260, 1187, 1205
TseI GCWGC 5 cut(s) 386, 431, 438, 507, 1051
Tsp45I GTSAC 3 cut(s) 260, 1187, 1205
TspDTI ATGAA 6 cut(s) 243, 323, 572, 622, 1334, 1371
TspGWI ACGGA 1 cut(s) 1087
TspRI CASTG 3 cut(s) 879, 1126, 1369
Van91I CCANNNNNTGG 2 cut(s) 1100, 1184
Vha464I CTTAAG 1 cut(s) 146
VpaK11BI GGWCC 2 cut(s) 158, 755
XapI RAATTY 6 cut(s) 277, 395, 654, 868, 886, 1022
XcmI CCANNNNNNNNNTGG 1 cut(s) 1097
XmiI GTMKAC 1 cut(s) 368
XmnI GAANNNNTTC 1 cut(s) 201
XspI CTAG 6 cut(s) 74, 155, 284, 729, 923, 1055
ZrmI AGTACT 2 cut(s) 325, 1083
Zsp2I ATGCAT 1 cut(s) 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.