Rmu_sc0012347.1_g000008

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012347.1
Physical Location & Seq
Reverse (-)
51464 .. 52096
633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012347.1_g000008.1.cds

Sequence Viewer

Length: 633 bp
atgggatacagtctttggaaggaggaaaccgagtgtctccaatggctaaactgcaaagcaccgaactcaattgtttatgtcaattttggcagtgttgcggttttgactccggaacaacttcttgagtttggttggggacttgcaaataccaagctccccttcttctgggttattaggcctgatttggttgctggaaaatcggcaatcctgccgccagagtttgaagctgaaaccaaagacagaggtctaatagcaagttggtgtcctcaagaagaagtcctaaaccatccatcagttggagggtttttaacacacagcggttggaattcaaccattgagagtattaccgctggagtgccaatgctgtgttggccattctctgcagaccagccaacaaacagtttctacacttgcaacgattggggcattgggacggagattactaatgatgtcaagagagacgatgtagagaagattgtcaaagaattaatgggggacgacaagggtaagaagatgaaaaacagggcattgcagtggaagaaactagctgaagaagccactgctccgcatggttcttcatcaaaaaacttggacaatttggtaaatcaagtcctattaagaaagcgcacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

210

Amino Acids

23.53

Weight (kDa)

5.48

Isoelectric Point (pI)

43.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 296
AccIII TCCGGA 1 cut(s) 109
AciI CCGC 5 cut(s) 98, 212, 318, 348, 566
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 1 cut(s) 325
AcuI CTGAAG 1 cut(s) 570
AfiI CCNNNNNNNGG 2 cut(s) 165, 296
AgsI TTSAA 2 cut(s) 224, 330
AjuI GAANNNNNNNTTGG 2 cut(s) 143, 175
AluBI AGCT 3 cut(s) 154, 227, 548
AluI AGCT 3 cut(s) 154, 227, 548
Alw26I GTCTC 2 cut(s) 41, 453
Aor13HI TCCGGA 1 cut(s) 109
AoxI GGCC 2 cut(s) 176, 371
ApoI RAATTY 1 cut(s) 325
AseI ATTAAT 1 cut(s) 488
Asp700I GAANNNNTTC 1 cut(s) 117
AspLEI GCGC 1 cut(s) 627
BalI TGGCCA 1 cut(s) 373
BccI CCATC 2 cut(s) 294, 298
BcoDI GTCTC 2 cut(s) 41, 453
BfaI CTAG 1 cut(s) 545
BfmI CTRYAG 1 cut(s) 381
BisI GCNGC 1 cut(s) 212
BlsI GCNGC 1 cut(s) 213
BoxI GACNNNNGTC 1 cut(s) 243
BpmI CTGGAG 1 cut(s) 372
BpuEI CTTGAG 2 cut(s) 143, 252
BsaWI WCCGGW 1 cut(s) 109
Bsc4I CCNNNNNNNGG 2 cut(s) 165, 296
Bse3DI GCAATG 1 cut(s) 527
BseAI TCCGGA 1 cut(s) 109
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 2 cut(s) 165, 296
BseMI GCAATG 1 cut(s) 527
BshFI GGCC 2 cut(s) 178, 373
BsiSI CCGG 1 cut(s) 110
BslFI GGGAC 3 cut(s) 150, 445, 509
BslI CCNNNNNNNGG 2 cut(s) 165, 296
BsmAI GTCTC 2 cut(s) 41, 453
BsmBI CGTCTC 1 cut(s) 453
BsmFI GGGAC 3 cut(s) 150, 445, 509
BsnI GGCC 2 cut(s) 178, 373
Bsp13I TCCGGA 1 cut(s) 109
BspACI CCGC 5 cut(s) 98, 212, 318, 348, 566
BspANI GGCC 2 cut(s) 178, 373
BspEI TCCGGA 1 cut(s) 109
BspMAI CTGCAG 1 cut(s) 385
BsrDI GCAATG 1 cut(s) 527
Bst4CI ACNGT 2 cut(s) 11, 401
BstDEI CTNAG 1 cut(s) 630
BstF5I GGATG 1 cut(s) 286
BstHHI GCGC 1 cut(s) 627
BstMAI GTCTC 2 cut(s) 41, 453
BstMWI GCNNNNNNNGC 2 cut(s) 370, 554
BstPAI GACNNNNGTC 1 cut(s) 243
BstSFI CTRYAG 1 cut(s) 381
BsuRI GGCC 2 cut(s) 178, 373
BtsCI GGATG 1 cut(s) 286
BtsI GCAGTG 3 cut(s) 97, 539, 558
BtsIMutI CAGTG 3 cut(s) 97, 539, 558
CfoI GCGC 1 cut(s) 627
CviAII CATG 1 cut(s) 569
CviJI RGCY 8 cut(s) 46, 154, 178, 227, 373, 391, 548, 557
CviKI_1 RGCY 8 cut(s) 46, 154, 178, 227, 373, 391, 548, 557
DdeI CTNAG 1 cut(s) 630
EaeI YGGCCR 1 cut(s) 371
Eco147I AGGCCT 1 cut(s) 178
Eco57I CTGAAG 1 cut(s) 570
EcoRI GAATTC 1 cut(s) 325
Esp3I CGTCTC 1 cut(s) 453
FaeI CATG 1 cut(s) 572
FaiI YATR 2 cut(s) 78, 570
FalI AAGNNNNNCTT 2 cut(s) 143, 175
FaqI GGGAC 3 cut(s) 150, 445, 509
FatI CATG 1 cut(s) 568
Fnu4HI GCNGC 1 cut(s) 212
FokI GGATG 1 cut(s) 273
Fsp4HI GCNGC 1 cut(s) 212
FspBI CTAG 1 cut(s) 545
GlaI GCGC 1 cut(s) 626
GluI GCNGC 1 cut(s) 212
GsuI CTGGAG 1 cut(s) 372
HaeIII GGCC 2 cut(s) 178, 373
HapII CCGG 1 cut(s) 110
HhaI GCGC 1 cut(s) 627
Hin1II CATG 1 cut(s) 572
Hin6I GCGC 1 cut(s) 625
HinP1I GCGC 1 cut(s) 625
HinfI GANTC 1 cut(s) 106
HpaII CCGG 1 cut(s) 110
Hpy188III TCNNGA 4 cut(s) 110, 122, 269, 454
HpyAV CCTTC 2 cut(s) 13, 169
HpyCH4III ACNGT 2 cut(s) 11, 401
HpyCH4V TGCA 5 cut(s) 54, 143, 383, 414, 532
HpyF10VI GCNNNNNNNGC 2 cut(s) 370, 554
HpyF3I CTNAG 1 cut(s) 630
Hsp92II CATG 1 cut(s) 572
HspAI GCGC 1 cut(s) 625
Kpn2I TCCGGA 1 cut(s) 109
LmnI GCTCC 2 cut(s) 159, 568
LpnPI CCDG 9 cut(s) 123, 151, 177, 192, 221, 228, 336, 401, 508
MaeI CTAG 1 cut(s) 545
MboII GAAGA 7 cut(s) 154, 284, 484, 523, 550, 563, 567
MfeI CAATTG 1 cut(s) 69
MlsI TGGCCA 1 cut(s) 373
MluCI AATT 5 cut(s) 69, 82, 325, 485, 595
MluNI TGGCCA 1 cut(s) 373
MlyI GAGTC 1 cut(s) 100
MmeI TCCRAC 2 cut(s) 277, 302
MnlI CCTC 4 cut(s) 16, 236, 276, 293
Mox20I TGGCCA 1 cut(s) 373
MroI TCCGGA 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 117
MscI TGGCCA 1 cut(s) 373
MseI TTAA 3 cut(s) 308, 488, 617
MslI CAYNNNNRTG 1 cut(s) 532
Msp20I TGGCCA 1 cut(s) 373
MspA1I CMGCKG 2 cut(s) 318, 350
MspI CCGG 1 cut(s) 110
MunI CAATTG 1 cut(s) 69
MwoI GCNNNNNNNGC 2 cut(s) 370, 554
NlaIII CATG 1 cut(s) 572
PceI AGGCCT 1 cut(s) 178
PdmI GAANNNNTTC 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 296
PkrI GCNGC 1 cut(s) 213
PleI GAGTC 1 cut(s) 100
PpsI GAGTC 1 cut(s) 100
PshAI GACNNNNGTC 1 cut(s) 243
PshBI ATTAAT 1 cut(s) 488
PstI CTGCAG 1 cut(s) 385
RseI CAYNNNNRTG 1 cut(s) 532
SaqAI TTAA 3 cut(s) 308, 488, 617
SatI GCNGC 1 cut(s) 212
SchI GAGTC 1 cut(s) 100
SetI ASST 4 cut(s) 156, 229, 247, 550
SfcI CTRYAG 1 cut(s) 381
SmiMI CAYNNNNRTG 1 cut(s) 532
SmlI CTYRAG 2 cut(s) 122, 267
SmoI CTYRAG 2 cut(s) 122, 267
Sse9I AATT 5 cut(s) 69, 82, 325, 485, 595
SseBI AGGCCT 1 cut(s) 178
SsiI CCGC 5 cut(s) 98, 212, 318, 348, 566
SspMI CTAG 1 cut(s) 545
StuI AGGCCT 1 cut(s) 178
TaaI ACNGT 2 cut(s) 11, 401
TasI AATT 5 cut(s) 69, 82, 325, 485, 595
TauI GCSGC 1 cut(s) 214
Tru1I TTAA 3 cut(s) 308, 488, 617
Tru9I TTAA 3 cut(s) 308, 488, 617
TscAI CASTG 3 cut(s) 97, 539, 565
TspDTI ATGAA 2 cut(s) 530, 567
TspGWI ACGGA 1 cut(s) 449
TspRI CASTG 3 cut(s) 97, 539, 565
Van91I CCANNNNNTGG 1 cut(s) 296
VspI ATTAAT 1 cut(s) 488
XapI RAATTY 1 cut(s) 325
XcmI CCANNNNNNNNNTGG 2 cut(s) 293, 366
XmnI GAANNNNTTC 1 cut(s) 117
XspI CTAG 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.