RchiOBHm_Chr2g0154001

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000097
Physical Location & Seq
Forward (+)
71232938 .. 71234847
1910 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52306

Sequence Viewer

Length: 1452 bp
ATGGGTTCCAAGGAAGTAGCTAAAAAGCCTCATGTTGTTTGTGTTACACTCCCATTTCAAAGCCATATAAAGGCAATGCTCAAGCTAGCAAAACTCCTCCACCACCGAGGTTTCCATATAACCTTTGTCAACACAGAGTTCAACCACAAACGATTTCTTAAATCTCTCGGACTCAACTCCCTCGATGGATTGCCTGATTTCCGGTTTGAAACCATTCCAGATGGCCTTCCGAGTTCGGATGAAGATGCATCGCAAGACGTCAGTTTGCTTTGCGAGTCTTTGAGGAAAAACTTCTTGACTCCGTTTCATGGGCTCCTCACAAAACTCAAGGGCTTGGCAAGTACTTCAAATACTTGTCCTCCGGTGACTCACATCGTTTCAGATGGTTGGAATGCCTATGTCCTTACAGCAGCAGAAAAACATCAAATTCCTGTCACACTCTTCTTTACTATGAGTGCAAGCAGCATCATGGCCTATGCACACTTCCCCGCTTTGATGGAAAAAGGACTCGCACCACTCAAAGATGAGAGCTGTTTGACAAATGGGTATTTGGACAAGATCATAGATTGGATTCCAGGAATGAAGGATATCCGGTTAAGGGATCTCCCGACCAACTTTCAAGTCACAAATCCTGATGACAGCGTCTGGAACTTTGTCCTTGAAGCAATTGAAGGACTTGGTAAAGCTGAAGCTGTTGTTCTTCATACATTCGATGCGTTGGAAGAAGATATTGTGGAAGCTCTCTCCTCTATGCTTCATTCACGTGTTTATGCCATTGGCCCTCTCCAATCACTCCTCAATCGCATACCAAAACACCCTTTGGACCCTATTGGATACAGTCTATGGAAAGAAGAAACTGAGTGCCTCCAGTGGCTCAACTCCAAGGCACCAAATTCAGTTATTTATGTGAACTTCGGCAGTATAATGATCATGACATCAAAAACTCTTATAGAGTTTGCTTGGGGACTTGCAAATACCAAGCTTCCCTTCTTTTGGGTGATTAGGCCTGATTTGGTTGCTGGTGAATCAGCCATTTTGCCACCGGAGTTTCTGGCAGAAACCAAACAAAGAGGTCTTATAGCAAGTTGGTGCCCACAAGAGCAAGTGCTTAACCACCCAGCAGTTGGAGGGTTTCTAACACACAGCGGTTGGAATTCAATCATTGAGAGTGTGTGTGCAGGAGTGCCTATGCTCTGTTGGCCATTCTTCTCGGACCAACAAACAAATACTTGGTCTGTTTGCAAGAAATGGGGCATTGGCATTGAGATCATCAGTAATGATGTGAAGAGAGACGAAGTAGAGAAGCTTGTTAAAGAGTTGATGGAAGGAAGGAGGGGTAAGAGAATGAGAAACAAGGCCATGGAGTGGAAGAAACTTGCAGAAGAAGCCACTGGTTCACATGGTTCTTCATCCACAAACTTGGACAACTTGGTGAATCAAGTCCTACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

483

Amino Acids

53.99

Weight (kDa)

6.25

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 287 - 446 3.4e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 261
AccB1I GGYRCC 2 cut(s) 886, 1089
AccB7I CCANNNNNTGG 2 cut(s) 1124, 1365
AciI CCGC 2 cut(s) 489, 1146
AclWI GGATC 1 cut(s) 609
AcoI YGGCCR 1 cut(s) 1199
AcsI RAATTY 3 cut(s) 426, 892, 1153
AcuI CTGAAG 1 cut(s) 708
AcvI CACGTG 1 cut(s) 764
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 1 cut(s) 343
AfiI CCNNNNNNNGG 6 cut(s) 70, 308, 598, 993, 1124, 1365
AflIII ACRYGT 1 cut(s) 763
AgsI TTSAA 8 cut(s) 59, 142, 209, 348, 620, 662, 671, 1158
AjnI CCWGG 1 cut(s) 574
AjuI GAANNNNNNNTTGG 2 cut(s) 971, 1003
AluBI AGCT 8 cut(s) 20, 85, 531, 686, 692, 740, 982, 1306
AluI AGCT 8 cut(s) 20, 85, 531, 686, 692, 740, 982, 1306
Alw26I GTCTC 1 cut(s) 1284
AlwI GGATC 1 cut(s) 609
AlwNI CAGNNNCTG 1 cut(s) 645
AoxI GGCC 6 cut(s) 223, 471, 778, 1004, 1199, 1356
ApeKI GCWGC 2 cut(s) 410, 462
ApoI RAATTY 3 cut(s) 426, 892, 1153
ArsI GACNNNNNNTTYG 2 cut(s) 1217, 1249
Asp700I GAANNNNTTC 2 cut(s) 213, 290
AspS9I GGNCC 3 cut(s) 779, 823, 1213
AsuHPI GGTGA 4 cut(s) 376, 1009, 1034, 1444
AsuNHI GCTAGC 1 cut(s) 85
AvaII GGWCC 2 cut(s) 823, 1213
BaeGI GKGCMC 1 cut(s) 1094
BalI TGGCCA 1 cut(s) 1201
BanI GGYRCC 2 cut(s) 886, 1089
BanII GRGCYC 1 cut(s) 315
BbrPI CACGTG 1 cut(s) 764
BbvI GCAGC 2 cut(s) 422, 474
BccI CCATC 5 cut(s) 179, 215, 377, 490, 1315
BciT130I CCWGG 1 cut(s) 576
BciVI GTATCC 1 cut(s) 827
BclI TGATCA 1 cut(s) 927
BcoDI GTCTC 1 cut(s) 1284
BfaI CTAG 1 cut(s) 86
BfuI GTATCC 1 cut(s) 827
BisI GCNGC 2 cut(s) 411, 463
BlsI GCNGC 2 cut(s) 412, 464
BmcAI AGTACT 1 cut(s) 343
Bme1390I CCNGG 1 cut(s) 576
Bme18I GGWCC 2 cut(s) 823, 1213
BmgT120I GGNCC 3 cut(s) 779, 823, 1213
BmiI GGNNCC 5 cut(s) 7, 314, 825, 888, 1091
BmrFI CCNGG 1 cut(s) 576
BmsI GCATC 4 cut(s) 235, 257, 474, 703
BmtI GCTAGC 1 cut(s) 89
BpmI CTGGAG 1 cut(s) 851
BpuEI CTTGAG 2 cut(s) 65, 311
BsaAI YACGTR 1 cut(s) 764
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 4 cut(s) 9, 106, 882, 1359
BsaWI WCCGGW 4 cut(s) 201, 361, 591, 1042
BsaXI ACNNNNNCTCC 2 cut(s) 343, 373
Bsc4I CCNNNNNNNGG 6 cut(s) 70, 308, 598, 993, 1124, 1365
Bse1I ACTGG 2 cut(s) 868, 1396
Bse3DI GCAATG 1 cut(s) 81
BseBI CCWGG 1 cut(s) 576
BseDI CCNNGG 4 cut(s) 9, 106, 882, 1359
BseGI GGATG 2 cut(s) 244, 1409
BseLI CCNNNNNNNGG 6 cut(s) 70, 308, 598, 993, 1124, 1365
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 2 cut(s) 868, 1396
BseRI GAGGAG 4 cut(s) 86, 305, 736, 785
BseSI GKGCMC 1 cut(s) 1094
BseXI GCAGC 2 cut(s) 422, 474
BseYI CCCAGC 1 cut(s) 1117
BsgI GTGCAG 1 cut(s) 1197
BshFI GGCC 6 cut(s) 225, 473, 780, 1006, 1201, 1358
BshNI GGYRCC 2 cut(s) 886, 1089
BsiSI CCGG 4 cut(s) 202, 362, 592, 1043
BslFI GGGAC 1 cut(s) 978
BslI CCNNNNNNNGG 6 cut(s) 70, 308, 598, 993, 1124, 1365
BsmAI GTCTC 1 cut(s) 1284
BsmBI CGTCTC 1 cut(s) 1284
BsmFI GGGAC 1 cut(s) 978
BsmI GAATGC 1 cut(s) 397
BsnI GGCC 6 cut(s) 225, 473, 780, 1006, 1201, 1358
Bsp1286I GDGCHC 2 cut(s) 315, 1094
Bsp143I GATC 4 cut(s) 558, 601, 927, 1266
Bsp19I CCATGG 1 cut(s) 1359
BspACI CCGC 2 cut(s) 489, 1146
BspANI GGCC 6 cut(s) 225, 473, 780, 1006, 1201, 1358
BspCNI CTCAG 1 cut(s) 850
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 5 cut(s) 7, 314, 825, 888, 1091
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 609
BspT107I GGYRCC 2 cut(s) 886, 1089
BsrDI GCAATG 1 cut(s) 81
BsrI ACTGG 2 cut(s) 868, 1396
BssECI CCNNGG 4 cut(s) 9, 106, 882, 1359
BssMI GATC 4 cut(s) 558, 601, 927, 1266
BssNI GRCGYC 1 cut(s) 258
BssT1I CCWWGG 3 cut(s) 9, 882, 1359
Bst2UI CCWGG 1 cut(s) 576
Bst4CI ACNGT 1 cut(s) 839
Bst6I CTCTTC 2 cut(s) 446, 1280
BstACI GRCGYC 1 cut(s) 258
BstBAI YACGTR 1 cut(s) 764
BstC8I GCNNGC 2 cut(s) 87, 460
BstDEI CTNAG 1 cut(s) 858
BstDSI CCRYGG 1 cut(s) 1359
BstF5I GGATG 2 cut(s) 244, 1409
BstKTI GATC 4 cut(s) 561, 604, 930, 1269
BstMAI GTCTC 1 cut(s) 1284
BstMBI GATC 4 cut(s) 558, 601, 927, 1266
BstMWI GCNNNNNNNGC 2 cut(s) 1198, 1385
BstNI CCWGG 1 cut(s) 576
BstSCI CCNGG 1 cut(s) 574
BstSLI GKGCMC 1 cut(s) 1094
BstV1I GCAGC 2 cut(s) 422, 474
BstX2I RGATCY 1 cut(s) 601
BstXI CCANNNNNNTGG 1 cut(s) 1420
BstYI RGATCY 1 cut(s) 601
BsuI GTATCC 1 cut(s) 827
BsuRI GGCC 6 cut(s) 225, 473, 780, 1006, 1201, 1358
BtgI CCRYGG 1 cut(s) 1359
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 2 cut(s) 244, 1409
BtsIMutI CAGTG 2 cut(s) 875, 1389
Cac8I GCNNGC 2 cut(s) 87, 460
CaiI CAGNNNCTG 1 cut(s) 645
CciI TCATGA 1 cut(s) 930
Cfr13I GGNCC 3 cut(s) 779, 823, 1213
CseI GACGC 1 cut(s) 631
Csp6I GTAC 1 cut(s) 342
CviAII CATG 6 cut(s) 32, 308, 469, 931, 1360, 1400
CviQI GTAC 1 cut(s) 342
DdeI CTNAG 1 cut(s) 858
DpnI GATC 4 cut(s) 560, 603, 929, 1268
DpnII GATC 4 cut(s) 558, 601, 927, 1266
EaeI YGGCCR 1 cut(s) 1199
Eam1104I CTCTTC 2 cut(s) 446, 1280
EarI CTCTTC 2 cut(s) 446, 1280
Eco130I CCWWGG 3 cut(s) 9, 882, 1359
Eco147I AGGCCT 1 cut(s) 1006
Eco24I GRGCYC 1 cut(s) 315
Eco32I GATATC 1 cut(s) 589
Eco47I GGWCC 2 cut(s) 823, 1213
Eco57I CTGAAG 1 cut(s) 708
Eco72I CACGTG 1 cut(s) 764
EcoRI GAATTC 1 cut(s) 1153
EcoRII CCWGG 1 cut(s) 574
EcoRV GATATC 1 cut(s) 589
EcoT14I CCWWGG 3 cut(s) 9, 882, 1359
EcoT22I ATGCAT 1 cut(s) 250
EcoT38I GRGCYC 1 cut(s) 315
ErhI CCWWGG 3 cut(s) 9, 882, 1359
Esp3I CGTCTC 1 cut(s) 1284
FaeI CATG 6 cut(s) 35, 311, 472, 934, 1363, 1403
FalI AAGNNNNNCTT 2 cut(s) 971, 1003
FaqI GGGAC 1 cut(s) 978
FatI CATG 6 cut(s) 31, 307, 468, 930, 1359, 1399
FauI CCCGC 1 cut(s) 496
FbaI TGATCA 1 cut(s) 927
Fnu4HI GCNGC 2 cut(s) 411, 463
FokI GGATG 2 cut(s) 251, 1396
FriOI GRGCYC 1 cut(s) 315
Fsp4HI GCNGC 2 cut(s) 411, 463
FspBI CTAG 1 cut(s) 86
GluI GCNGC 2 cut(s) 411, 463
GsaI CCCAGC 1 cut(s) 1121
GsuI CTGGAG 1 cut(s) 851
HaeIII GGCC 6 cut(s) 225, 473, 780, 1006, 1201, 1358
HapII CCGG 4 cut(s) 202, 362, 592, 1043
HgaI GACGC 1 cut(s) 631
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 6 cut(s) 35, 311, 472, 934, 1363, 1403
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 2 cut(s) 980, 1304
HinfI GANTC 8 cut(s) 171, 275, 298, 367, 507, 571, 1025, 1435
HpaII CCGG 4 cut(s) 202, 362, 592, 1043
HphI GGTGA 4 cut(s) 376, 1009, 1034, 1444
Hpy166II GTNNAC 3 cut(s) 130, 910, 1397
Hpy188I TCNGA 5 cut(s) 170, 231, 238, 382, 1213
Hpy188III TCNNGA 6 cut(s) 218, 295, 607, 632, 646, 931
Hpy8I GTNNAC 3 cut(s) 130, 910, 1397
HpyAV CCTTC 6 cut(s) 236, 577, 665, 997, 1319, 1323
HpyCH4III ACNGT 1 cut(s) 839
HpyCH4IV ACGT 2 cut(s) 258, 763
HpyCH4V TGCA 7 cut(s) 248, 458, 479, 971, 1178, 1242, 1379
HpyF10VI GCNNNNNNNGC 2 cut(s) 1198, 1385
HpyF3I CTNAG 1 cut(s) 858
HpySE526I ACGT 2 cut(s) 258, 763
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 6 cut(s) 35, 311, 472, 934, 1363, 1403
Ksp22I TGATCA 1 cut(s) 927
Kzo9I GATC 4 cut(s) 558, 601, 927, 1266
LmnI GCTCC 1 cut(s) 318
Lsp1109I GCAGC 2 cut(s) 422, 474
LweI GCATC 4 cut(s) 235, 257, 474, 703
MaeI CTAG 1 cut(s) 86
MaeII ACGT 2 cut(s) 258, 763
MaeIII GTNAC 4 cut(s) 43, 364, 433, 622
MalI GATC 4 cut(s) 560, 603, 929, 1268
MboI GATC 4 cut(s) 558, 601, 927, 1266
MfeI CAATTG 1 cut(s) 666
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 2 cut(s) 315, 1094
MlsI TGGCCA 1 cut(s) 1201
MluCI AATT 4 cut(s) 426, 666, 892, 1153
MluNI TGGCCA 1 cut(s) 1201
MlyI GAGTC 5 cut(s) 165, 284, 292, 361, 501
MmeI TCCRAC 4 cut(s) 368, 699, 1105, 1130
Mox20I TGGCCA 1 cut(s) 1201
Mph1103I ATGCAT 1 cut(s) 250
MroXI GAANNNNTTC 2 cut(s) 213, 290
MscI TGGCCA 1 cut(s) 1201
MseI TTAA 4 cut(s) 159, 596, 1110, 1311
MslI CAYNNNNRTG 1 cut(s) 762
Msp20I TGGCCA 1 cut(s) 1201
MspA1I CMGCKG 1 cut(s) 1146
MspI CCGG 4 cut(s) 202, 362, 592, 1043
MspR9I CCNGG 1 cut(s) 576
MunI CAATTG 1 cut(s) 666
Mva1269I GAATGC 1 cut(s) 397
MvaI CCWGG 1 cut(s) 576
MwoI GCNNNNNNNGC 2 cut(s) 1198, 1385
NcoI CCATGG 1 cut(s) 1359
NdeII GATC 4 cut(s) 558, 601, 927, 1266
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 6 cut(s) 35, 311, 472, 934, 1363, 1403
NlaIV GGNNCC 5 cut(s) 7, 314, 825, 888, 1091
NmuCI GTSAC 3 cut(s) 364, 433, 622
NsiI ATGCAT 1 cut(s) 250
PagI TCATGA 1 cut(s) 930
PceI AGGCCT 1 cut(s) 1006
PctI GAATGC 1 cut(s) 397
PdmI GAANNNNTTC 2 cut(s) 213, 290
PfeI GAWTC 3 cut(s) 571, 1025, 1435
PflFI GACNNNGTC 1 cut(s) 641
PflMI CCANNNNNTGG 2 cut(s) 1124, 1365
PfoI TCCNGGA 1 cut(s) 574
PkrI GCNGC 2 cut(s) 412, 464
PleI GAGTC 5 cut(s) 165, 283, 292, 361, 501
PmaCI CACGTG 1 cut(s) 764
PmlI CACGTG 1 cut(s) 764
PpsI GAGTC 5 cut(s) 165, 283, 292, 361, 501
Ppu21I YACGTR 1 cut(s) 764
Psp6I CCWGG 1 cut(s) 574
PspCI CACGTG 1 cut(s) 764
PspFI CCCAGC 1 cut(s) 1117
PspGI CCWGG 1 cut(s) 574
PspN4I GGNNCC 5 cut(s) 7, 314, 825, 888, 1091
PspPI GGNCC 3 cut(s) 779, 823, 1213
PstNI CAGNNNCTG 1 cut(s) 645
PsuI RGATCY 1 cut(s) 601
PsyI GACNNNGTC 1 cut(s) 641
RsaI GTAC 1 cut(s) 343
RsaNI GTAC 1 cut(s) 342
RseI CAYNNNNRTG 1 cut(s) 762
SaqAI TTAA 4 cut(s) 159, 596, 1110, 1311
SatI GCNGC 2 cut(s) 411, 463
Sau3AI GATC 4 cut(s) 558, 601, 927, 1266
Sau96I GGNCC 3 cut(s) 779, 823, 1213
ScaI AGTACT 1 cut(s) 343
SchI GAGTC 5 cut(s) 165, 284, 292, 361, 501
ScrFI CCNGG 1 cut(s) 576
SduI GDGCHC 2 cut(s) 315, 1094
SfaNI GCATC 4 cut(s) 235, 257, 474, 703
SinI GGWCC 2 cut(s) 823, 1213
SmiMI CAYNNNNRTG 1 cut(s) 762
SmlI CTYRAG 2 cut(s) 80, 326
SmoI CTYRAG 2 cut(s) 80, 326
Sse9I AATT 4 cut(s) 426, 666, 892, 1153
SseBI AGGCCT 1 cut(s) 1006
SsiI CCGC 2 cut(s) 489, 1146
SspMI CTAG 1 cut(s) 86
StuI AGGCCT 1 cut(s) 1006
StyD4I CCNGG 1 cut(s) 574
StyI CCWWGG 3 cut(s) 9, 882, 1359
TaaI ACNGT 1 cut(s) 839
TaiI ACGT 2 cut(s) 261, 766
TaqI TCGA 2 cut(s) 183, 711
TasI AATT 4 cut(s) 426, 666, 892, 1153
TatI WGTACW 1 cut(s) 341
TfiI GAWTC 3 cut(s) 571, 1025, 1435
Tru1I TTAA 4 cut(s) 159, 596, 1110, 1311
Tru9I TTAA 4 cut(s) 159, 596, 1110, 1311
TscAI CASTG 2 cut(s) 875, 1396
TseFI GTSAC 3 cut(s) 364, 433, 622
TseI GCWGC 2 cut(s) 410, 462
Tsp45I GTSAC 3 cut(s) 364, 433, 622
TspDTI ATGAA 6 cut(s) 255, 296, 596, 692, 746, 1398
TspGWI ACGGA 1 cut(s) 291
TspRI CASTG 2 cut(s) 875, 1396
Tth111I GACNNNGTC 1 cut(s) 641
Van91I CCANNNNNTGG 2 cut(s) 1124, 1365
VpaK11BI GGWCC 2 cut(s) 823, 1213
XapI RAATTY 3 cut(s) 426, 892, 1153
XcmI CCANNNNNNNNNTGG 1 cut(s) 1121
XmnI GAANNNNTTC 2 cut(s) 213, 290
XspI CTAG 1 cut(s) 86
ZraI GACGTC 1 cut(s) 259
ZrmI AGTACT 1 cut(s) 343
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.