FvH4_5g15110

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
8542701 .. 8544199
1499 bp
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UTR
Exon/CDS
Intron
FvH4_5g15110.t1

Sequence Viewer

Length: 696 bp
ATGGTAGAGCAAAACAAAGTGAGCTTATATGGAATATGGGCTAGCCCATTTGTTAAGACGGTGGAATTTGCTCTCAAAGTGAAGGGTATACCCTATGAATATCTGGAAGAAGATTTGTGGAACAAAAGTCCATTGCTCCTCAAGTTCAATCCTATTCATAAGAAGGTTCCTGTACTTTTTCATAACGGGAAAGCCATTGCTGAGTCTCTTTTGATCATCGAGTATATTGATGAAACCTGGAAAACTGACCCTCAACTTTTACCAGAAAATCCATATGAAAGATCCCAAATTCGCTTCTGGGCAAGCTATATGCACCAGGTGTTCTGGGCCTTGGCGGTAGTGGTTAAAACCAGTGGAGAAGCACAAGAGAAAGCCATCAAGGAAATGTTTGAGAAATTAATATTACTTGAAGAGGGACTCAAGGGTTTGTTCCCAGACGGCTATGTTGCATCAGCTGATGAGTTTAGCAAAAATGTACTAGAGTGGATCATGTTTGCATTCTTTAGCTCGTATGAAGCTGTGCATGAAGTTCTTGGCATAAATGTTACTGATCCTGAGAAGACTCCACTGTTATTTTCCTGCATAACAGCTCTGATGGAGATACCTGAGGTGAAAGAGTCATGTTACCCTCATGAAAAGATGGTGGCCTTCCTGAAGTCCTTGAGAGAATATGCCCTCAAGACTACTACAGCTTGA

Protein Analysis

232

Amino Acids

26.62

Weight (kDa)

5.26

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 7 - 78 3.5e-16 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 9 - 79 1.2e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 14 - 79 6.7e-15 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 88
AciI CCGC 1 cut(s) 335
AclWI GGATC 3 cut(s) 276, 494, 545
AcsI RAATTY 2 cut(s) 65, 288
AcuI CTGAAG 1 cut(s) 674
AdeI CACNNNGTG 1 cut(s) 319
AfaI GTAC 2 cut(s) 174, 477
AgsI TTSAA 2 cut(s) 148, 410
AjnI CCWGG 2 cut(s) 236, 315
AluBI AGCT 7 cut(s) 24, 306, 455, 507, 518, 590, 692
AluI AGCT 7 cut(s) 24, 306, 455, 507, 518, 590, 692
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 3 cut(s) 276, 494, 545
AoxI GGCC 2 cut(s) 327, 645
ApoI RAATTY 2 cut(s) 65, 288
AseI ATTAAT 1 cut(s) 398
AspS9I GGNCC 1 cut(s) 327
AsuHPI GGTGA 1 cut(s) 622
AsuNHI GCTAGC 1 cut(s) 41
AxyI CCTNAGG 1 cut(s) 606
BbsI GAAGAC 1 cut(s) 566
BccI CCATC 3 cut(s) 383, 589, 634
BceAI ACGGC 1 cut(s) 454
BciT130I CCWGG 2 cut(s) 238, 317
BclI TGATCA 1 cut(s) 213
BcoDI GTCTC 1 cut(s) 210
BfaI CTAG 2 cut(s) 42, 479
BfmI CTRYAG 1 cut(s) 687
Bme1390I CCNGG 2 cut(s) 238, 317
BmgT120I GGNCC 1 cut(s) 327
BmiI GGNNCC 1 cut(s) 168
BmrFI CCNGG 2 cut(s) 238, 317
BmsI GCATC 1 cut(s) 458
BmtI GCTAGC 1 cut(s) 45
BpiI GAAGAC 1 cut(s) 566
BpuEI CTTGAG 4 cut(s) 125, 404, 662, 682
BsaJI CCNNGG 1 cut(s) 330
Bse1I ACTGG 1 cut(s) 351
Bse21I CCTNAGG 1 cut(s) 606
Bse3DI GCAATG 2 cut(s) 131, 195
BseBI CCWGG 2 cut(s) 238, 317
BseDI CCNNGG 1 cut(s) 330
BseMI GCAATG 2 cut(s) 131, 195
BseMII CTCAG 3 cut(s) 192, 546, 597
BseNI ACTGG 1 cut(s) 351
BseRI GAGGAG 1 cut(s) 128
BshFI GGCC 2 cut(s) 329, 647
BslFI GGGAC 1 cut(s) 429
BsmAI GTCTC 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 429
BsmI GAATGC 1 cut(s) 497
BsnI GGCC 2 cut(s) 329, 647
Bsp143I GATC 4 cut(s) 213, 281, 486, 550
BspACI CCGC 1 cut(s) 335
BspANI GGCC 2 cut(s) 329, 647
BspCNI CTCAG 3 cut(s) 193, 547, 598
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 1 cut(s) 168
BspOI GCTAGC 1 cut(s) 45
BspPI GGATC 3 cut(s) 276, 494, 545
BsrDI GCAATG 2 cut(s) 131, 195
BsrI ACTGG 1 cut(s) 351
BssECI CCNNGG 1 cut(s) 330
BssMI GATC 4 cut(s) 213, 281, 486, 550
BssNAI GTATAC 1 cut(s) 89
BssT1I CCWWGG 1 cut(s) 330
Bst1107I GTATAC 1 cut(s) 89
Bst2UI CCWGG 2 cut(s) 238, 317
Bst4CI ACNGT 2 cut(s) 61, 570
Bst6I CTCTTC 1 cut(s) 405
BstC8I GCNNGC 2 cut(s) 43, 304
BstDEI CTNAG 3 cut(s) 201, 555, 606
BstKTI GATC 4 cut(s) 216, 284, 489, 553
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 4 cut(s) 213, 281, 486, 550
BstNI CCWGG 2 cut(s) 238, 317
BstSCI CCNGG 2 cut(s) 236, 315
BstSFI CTRYAG 1 cut(s) 687
BstV2I GAAGAC 1 cut(s) 566
BstX2I RGATCY 1 cut(s) 281
BstYI RGATCY 1 cut(s) 281
BstZ17I GTATAC 1 cut(s) 89
Bsu36I CCTNAGG 1 cut(s) 606
BsuRI GGCC 2 cut(s) 329, 647
BtsIMutI CAGTG 2 cut(s) 358, 566
Cac8I GCNNGC 2 cut(s) 43, 304
CciI TCATGA 1 cut(s) 631
Cfr13I GGNCC 1 cut(s) 327
CsiI ACCWGGT 1 cut(s) 315
Csp6I GTAC 2 cut(s) 173, 476
CviAII CATG 4 cut(s) 490, 524, 621, 632
CviQI GTAC 2 cut(s) 173, 476
DdeI CTNAG 3 cut(s) 201, 555, 606
DpnI GATC 4 cut(s) 215, 283, 488, 552
DpnII GATC 4 cut(s) 213, 281, 486, 550
DraIII CACNNNGTG 1 cut(s) 319
Eam1104I CTCTTC 1 cut(s) 405
EarI CTCTTC 1 cut(s) 405
Eco130I CCWWGG 1 cut(s) 330
Eco57I CTGAAG 1 cut(s) 674
Eco81I CCTNAGG 1 cut(s) 606
EcoRII CCWGG 2 cut(s) 236, 315
EcoT14I CCWWGG 1 cut(s) 330
ErhI CCWWGG 1 cut(s) 330
FaeI CATG 4 cut(s) 493, 527, 624, 635
FaqI GGGAC 1 cut(s) 429
FatI CATG 4 cut(s) 489, 523, 620, 631
FauNDI CATATG 1 cut(s) 274
FbaI TGATCA 1 cut(s) 213
FblI GTMKAC 1 cut(s) 88
FspBI CTAG 2 cut(s) 42, 479
HaeIII GGCC 2 cut(s) 329, 647
Hin1II CATG 4 cut(s) 493, 527, 624, 635
HinfI GANTC 4 cut(s) 203, 417, 562, 617
HphI GGTGA 1 cut(s) 622
Hpy166II GTNNAC 1 cut(s) 89
Hpy188I TCNGA 1 cut(s) 594
Hpy188III TCNNGA 5 cut(s) 104, 554, 632, 652, 679
Hpy8I GTNNAC 1 cut(s) 89
HpyAV CCTTC 3 cut(s) 76, 157, 658
HpyCH4III ACNGT 2 cut(s) 61, 570
HpyCH4V TGCA 5 cut(s) 313, 449, 497, 523, 582
HpyF3I CTNAG 3 cut(s) 201, 555, 606
Hsp92II CATG 4 cut(s) 493, 527, 624, 635
Ksp22I TGATCA 1 cut(s) 213
Kzo9I GATC 4 cut(s) 213, 281, 486, 550
LmnI GCTCC 1 cut(s) 141
LweI GCATC 1 cut(s) 458
MabI ACCWGGT 1 cut(s) 315
MaeI CTAG 2 cut(s) 42, 479
MaeIII GTNAC 2 cut(s) 544, 623
MalI GATC 4 cut(s) 215, 283, 488, 552
MboI GATC 4 cut(s) 213, 281, 486, 550
MboII GAAGA 4 cut(s) 119, 122, 422, 571
MflI RGATCY 1 cut(s) 281
MluCI AATT 3 cut(s) 65, 288, 395
MlyI GAGTC 4 cut(s) 212, 411, 556, 626
MnlI CCTC 6 cut(s) 149, 261, 406, 601, 639, 686
MseI TTAA 3 cut(s) 54, 345, 398
MspA1I CMGCKG 1 cut(s) 455
MspR9I CCNGG 2 cut(s) 238, 317
Mva1269I GAATGC 1 cut(s) 497
MvaI CCWGG 2 cut(s) 238, 317
NdeI CATATG 1 cut(s) 274
NdeII GATC 4 cut(s) 213, 281, 486, 550
NheI GCTAGC 1 cut(s) 41
NlaIII CATG 4 cut(s) 493, 527, 624, 635
NlaIV GGNNCC 1 cut(s) 168
PagI TCATGA 1 cut(s) 631
PctI GAATGC 1 cut(s) 497
PleI GAGTC 4 cut(s) 211, 411, 556, 625
PpsI GAGTC 4 cut(s) 211, 411, 556, 625
PshBI ATTAAT 1 cut(s) 398
Psp6I CCWGG 2 cut(s) 236, 315
PspGI CCWGG 2 cut(s) 236, 315
PspN4I GGNNCC 1 cut(s) 168
PspPI GGNCC 1 cut(s) 327
PsuI RGATCY 1 cut(s) 281
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 2 cut(s) 174, 477
RsaNI GTAC 2 cut(s) 173, 476
SaqAI TTAA 3 cut(s) 54, 345, 398
Sau3AI GATC 4 cut(s) 213, 281, 486, 550
Sau96I GGNCC 1 cut(s) 327
SchI GAGTC 4 cut(s) 212, 411, 556, 626
ScrFI CCNGG 2 cut(s) 238, 317
SexAI ACCWGGT 1 cut(s) 315
SfaNI GCATC 1 cut(s) 458
SfcI CTRYAG 1 cut(s) 687
SmlI CTYRAG 4 cut(s) 140, 419, 661, 677
SmoI CTYRAG 4 cut(s) 140, 419, 661, 677
Sse9I AATT 3 cut(s) 65, 288, 395
SsiI CCGC 1 cut(s) 335
SspI AATATT 1 cut(s) 402
SspMI CTAG 2 cut(s) 42, 479
StyD4I CCNGG 2 cut(s) 236, 315
StyI CCWWGG 1 cut(s) 330
TaaI ACNGT 2 cut(s) 61, 570
TaqI TCGA 1 cut(s) 219
TasI AATT 3 cut(s) 65, 288, 395
TatI WGTACW 2 cut(s) 172, 475
Tru1I TTAA 3 cut(s) 54, 345, 398
Tru9I TTAA 3 cut(s) 54, 345, 398
TscAI CASTG 2 cut(s) 358, 573
TspDTI ATGAA 8 cut(s) 111, 146, 170, 246, 291, 528, 540, 648
TspRI CASTG 2 cut(s) 358, 573
VspI ATTAAT 1 cut(s) 398
XapI RAATTY 2 cut(s) 65, 288
XmiI GTMKAC 1 cut(s) 88
XspI CTAG 2 cut(s) 42, 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.