Rh7AG041600

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
2759261 .. 2759623
363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG041600.1

Sequence Viewer

Length: 363 bp
ATGTCCCTGTTGTGCAAAACTGATGGAGAAGTACAAGAGAAGGCCATCAAAGAATTGTTTGAGAAATTAAAGACATTTGAAGAGGGAATCAAGGACTTATTCCCAGACGGTGCGCCTTCTATTGACTGCAGCAACAATCTGGGGCTTCTGGACATTGTATTGTGTTCACAGTTTGGCCCTCATAAAGTTCAGGAAGAAGTGCTTGGTAAAACAACTATTGACCCAGAGAAAAACCCACTTTTGTTTACTTGGCTGAAATCTCTGAATGAGTTGCCTTTAGTGAAAGAGTTAACCCCTCATGAAAAGCTAGTATCAGTTCTTCACTTTTTCAGAAACTATGCCCTCAAATCTAGTGCTGCTTGA

Protein Analysis

120

Amino Acids

13.47

Weight (kDa)

5.36

Isoelectric Point (pI)

27.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 33
AgsI TTSAA 1 cut(s) 80
AjuI GAANNNNNNNTTGG 2 cut(s) 186, 218
AluBI AGCT 1 cut(s) 307
AluI AGCT 1 cut(s) 307
AoxI GGCC 2 cut(s) 42, 175
ApeKI GCWGC 2 cut(s) 129, 356
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 1 cut(s) 176
BarI GAAGNNNNNNTAC 2 cut(s) 303, 335
BbvI GCAGC 2 cut(s) 141, 343
BccI CCATC 2 cut(s) 17, 53
BfaI CTAG 2 cut(s) 308, 351
BfmI CTRYAG 1 cut(s) 127
BisI GCNGC 2 cut(s) 130, 357
BlsI GCNGC 2 cut(s) 131, 358
BmgT120I GGNCC 1 cut(s) 176
BseXI GCAGC 2 cut(s) 141, 343
BshFI GGCC 2 cut(s) 44, 177
BsnI GGCC 2 cut(s) 44, 177
BspANI GGCC 2 cut(s) 44, 177
BspHI TCATGA 1 cut(s) 298
BspMAI CTGCAG 1 cut(s) 131
Bst4CI ACNGT 2 cut(s) 110, 171
Bst6I CTCTTC 1 cut(s) 75
BstHHI GCGC 1 cut(s) 115
BstSFI CTRYAG 1 cut(s) 127
BstV1I GCAGC 2 cut(s) 141, 343
BsuRI GGCC 2 cut(s) 44, 177
CciI TCATGA 1 cut(s) 298
CfoI GCGC 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 176
Csp6I GTAC 1 cut(s) 32
CviAII CATG 1 cut(s) 299
CviJI RGCY 5 cut(s) 44, 145, 177, 253, 307
CviKI_1 RGCY 5 cut(s) 44, 145, 177, 253, 307
CviQI GTAC 1 cut(s) 32
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
FaeI CATG 1 cut(s) 302
FaiI YATR 3 cut(s) 183, 300, 339
FalI AAGNNNNNCTT 2 cut(s) 186, 218
FatI CATG 1 cut(s) 298
Fnu4HI GCNGC 2 cut(s) 130, 357
Fsp4HI GCNGC 2 cut(s) 130, 357
FspBI CTAG 2 cut(s) 308, 351
GlaI GCGC 1 cut(s) 114
GluI GCNGC 2 cut(s) 130, 357
HaeIII GGCC 2 cut(s) 44, 177
HhaI GCGC 1 cut(s) 115
Hin1II CATG 1 cut(s) 302
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 1 cut(s) 291
HindII GTYRAC 1 cut(s) 291
HinfI GANTC 1 cut(s) 87
HpaI GTTAAC 1 cut(s) 291
Hpy166II GTNNAC 3 cut(s) 167, 246, 291
Hpy188I TCNGA 2 cut(s) 264, 332
Hpy188III TCNNGA 3 cut(s) 149, 191, 299
Hpy8I GTNNAC 3 cut(s) 167, 246, 291
HpyAV CCTTC 2 cut(s) 34, 126
HpyCH4III ACNGT 2 cut(s) 110, 171
HpyCH4V TGCA 2 cut(s) 15, 129
Hsp92II CATG 1 cut(s) 302
HspAI GCGC 1 cut(s) 113
KspAI GTTAAC 1 cut(s) 291
LpnPI CCDG 6 cut(s) 20, 117, 125, 134, 176, 237
Lsp1109I GCAGC 2 cut(s) 141, 343
MaeI CTAG 2 cut(s) 308, 351
MboII GAAGA 3 cut(s) 92, 206, 311
MluCI AATT 2 cut(s) 53, 65
MnlI CCTC 4 cut(s) 76, 189, 306, 353
MseI TTAA 2 cut(s) 68, 290
NlaIII CATG 1 cut(s) 302
PagI TCATGA 1 cut(s) 298
PfeI GAWTC 1 cut(s) 87
PkrI GCNGC 2 cut(s) 131, 358
PspPI GGNCC 1 cut(s) 176
PstI CTGCAG 1 cut(s) 131
RsaI GTAC 1 cut(s) 33
RsaNI GTAC 1 cut(s) 32
SaqAI TTAA 2 cut(s) 68, 290
SatI GCNGC 2 cut(s) 130, 357
Sau96I GGNCC 1 cut(s) 176
SetI ASST 1 cut(s) 309
SfcI CTRYAG 1 cut(s) 127
Sse9I AATT 2 cut(s) 53, 65
SspMI CTAG 2 cut(s) 308, 351
TaaI ACNGT 2 cut(s) 110, 171
TasI AATT 2 cut(s) 53, 65
TatI WGTACW 1 cut(s) 31
TfiI GAWTC 1 cut(s) 87
Tru1I TTAA 2 cut(s) 68, 290
Tru9I TTAA 2 cut(s) 68, 290
TseI GCWGC 2 cut(s) 129, 356
TspDTI ATGAA 1 cut(s) 315
XspI CTAG 2 cut(s) 308, 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.