Rh7AG040400

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
2713233 .. 2713550
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG040400.1

Sequence Viewer

Length: 318 bp
ATGTTTGAGAAATTAAAGTTACTTGAAGAGGGACTCAAGGGTTTGTTCCTAGATGGCATTGCTTCATCAGCTGATGAGTTTAGAAAAAATGTGACACTACCAGAGTTGGTCATGTTCTCATGCTTTGGCACATATGAAGCTCTGCAAGAAGTTCTTGGCATAAATTTTATAGACCCTGAGAAGACTCCACTGGTATTTTCCTGCATAACACCTCCCATTGATAAACCTGCGGTGAAAGAGGCGTGTCACCCTCATGAAAAGATGGTAGCCTTCCTCATTGCATTTAGAGAAAATGCCCTAAAGTCTACTACAACTTGA

Protein Analysis

105

Amino Acids

11.72

Weight (kDa)

5.12

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 235
AccI GTMKAC 1 cut(s) 305
AciI CCGC 1 cut(s) 230
AcsI RAATTY 1 cut(s) 163
AgsI TTSAA 1 cut(s) 26
AluBI AGCT 2 cut(s) 71, 140
AluI AGCT 2 cut(s) 71, 140
ApoI RAATTY 1 cut(s) 163
AsuHPI GGTGA 2 cut(s) 239, 244
BbsI GAAGAC 1 cut(s) 188
BccI CCATC 2 cut(s) 47, 256
BfaI CTAG 1 cut(s) 50
BfuAI ACCTGC 1 cut(s) 235
BpiI GAAGAC 1 cut(s) 188
BpuEI CTTGAG 1 cut(s) 20
Bse1I ACTGG 1 cut(s) 195
Bse3DI GCAATG 2 cut(s) 57, 276
BseMI GCAATG 2 cut(s) 57, 276
BseMII CTCAG 1 cut(s) 168
BseNI ACTGG 1 cut(s) 195
BslFI GGGAC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 45
BspACI CCGC 1 cut(s) 230
BspCNI CTCAG 1 cut(s) 169
BspHI TCATGA 1 cut(s) 253
BspMI ACCTGC 1 cut(s) 235
BsrDI GCAATG 2 cut(s) 57, 276
BsrI ACTGG 1 cut(s) 195
Bst6I CTCTTC 1 cut(s) 21
BstDEI CTNAG 1 cut(s) 177
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstV2I GAAGAC 1 cut(s) 188
BtsIMutI CAGTG 1 cut(s) 188
BveI ACCTGC 1 cut(s) 235
CciI TCATGA 1 cut(s) 253
CviAII CATG 3 cut(s) 112, 120, 254
CviJI RGCY 3 cut(s) 71, 140, 269
CviKI_1 RGCY 3 cut(s) 71, 140, 269
DdeI CTNAG 1 cut(s) 177
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
FaeI CATG 3 cut(s) 115, 123, 257
FaiI YATR 8 cut(s) 113, 121, 133, 135, 161, 170, 206, 255
FalI AAGNNNNNCTT 2 cut(s) 138, 170
FaqI GGGAC 1 cut(s) 45
FatI CATG 3 cut(s) 111, 119, 253
FauNDI CATATG 1 cut(s) 133
FblI GTMKAC 1 cut(s) 305
FspBI CTAG 1 cut(s) 50
Hin1II CATG 3 cut(s) 115, 123, 257
HinfI GANTC 2 cut(s) 33, 184
HphI GGTGA 2 cut(s) 239, 244
Hpy166II GTNNAC 1 cut(s) 306
Hpy188III TCNNGA 1 cut(s) 254
Hpy8I GTNNAC 1 cut(s) 306
HpyAV CCTTC 1 cut(s) 280
HpyCH4V TGCA 3 cut(s) 145, 204, 281
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 177
Hsp92II CATG 3 cut(s) 115, 123, 257
LpnPI CCDG 5 cut(s) 114, 176, 189, 214, 240
MaeI CTAG 1 cut(s) 50
MaeIII GTNAC 3 cut(s) 18, 91, 245
MboII GAAGA 2 cut(s) 38, 193
MluCI AATT 2 cut(s) 11, 163
MlyI GAGTC 2 cut(s) 27, 178
MnlI CCTC 5 cut(s) 22, 222, 232, 261, 284
MseI TTAA 1 cut(s) 14
MslI CAYNNNNRTG 1 cut(s) 252
MspA1I CMGCKG 1 cut(s) 71
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeI CATATG 1 cut(s) 133
NlaIII CATG 3 cut(s) 115, 123, 257
NmuCI GTSAC 2 cut(s) 91, 245
PagI TCATGA 1 cut(s) 253
PleI GAGTC 2 cut(s) 27, 178
PpsI GAGTC 2 cut(s) 27, 178
PvuII CAGCTG 1 cut(s) 71
RseI CAYNNNNRTG 1 cut(s) 252
SaqAI TTAA 1 cut(s) 14
SchI GAGTC 2 cut(s) 27, 178
SetI ASST 4 cut(s) 73, 142, 214, 229
SmiMI CAYNNNNRTG 1 cut(s) 252
SmlI CTYRAG 1 cut(s) 35
SmoI CTYRAG 1 cut(s) 35
Sse9I AATT 2 cut(s) 11, 163
SsiI CCGC 1 cut(s) 230
SspMI CTAG 1 cut(s) 50
TasI AATT 2 cut(s) 11, 163
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TscAI CASTG 1 cut(s) 195
TseFI GTSAC 2 cut(s) 91, 245
Tsp45I GTSAC 2 cut(s) 91, 245
TspDTI ATGAA 3 cut(s) 54, 150, 270
TspRI CASTG 1 cut(s) 195
XapI RAATTY 1 cut(s) 163
XmiI GTMKAC 1 cut(s) 305
XspI CTAG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.