pycom06g17020

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
21099761 .. 21100337
577 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g17020.1

Sequence Viewer

Length: 396 bp
ATGGAAAACCGATTGCTGAGTCTCTTGTCATCCTTGAATACATCGACGAAACCTGGAAAATTGGACTTCTTCTACAAGATCCCTATAAAAGATCCTAAGTTCGTTTCTATGCTGGCTTTATGTAACAGCATGGTCTCAGTGTTGGAAACCAGGGGGCAAGCACAAGAGAAAGTCATCAAAGAAGTGAGTGAGAAACTAAATCTGCTTGAAGAGGGACTGAAGGGTTTCTACCCTAATGGATTTCCCAAGTCGTTTGACCCTAAGAATGTTGGACTCCTAGAAGTGGTCATTCTTGCACACTTAGGGGCATATGAGGCTCAGGAAGAAGTCCTTGGATTTAAGGTCATAGACCTTCAAACAACTCCTCATATATTCCTGCATAAGAGCTATGACTGA

Protein Analysis

132

Amino Acids

14.73

Weight (kDa)

6.3

Isoelectric Point (pI)

26.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 73, 86
AcuI CTGAAG 1 cut(s) 239
AfiI CCNNNNNNNGG 1 cut(s) 283
AgsI TTSAA 3 cut(s) 37, 209, 356
AjnI CCWGG 2 cut(s) 52, 149
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 1 cut(s) 387
AluI AGCT 1 cut(s) 387
Alw26I GTCTC 2 cut(s) 26, 139
AlwI GGATC 2 cut(s) 73, 86
Asp700I GAANNNNTTC 1 cut(s) 224
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
BciT130I CCWGG 2 cut(s) 54, 151
BcoDI GTCTC 2 cut(s) 26, 139
BfaI CTAG 1 cut(s) 278
Bme1390I CCNGG 2 cut(s) 54, 151
BmrFI CCNGG 2 cut(s) 54, 151
Bpu10I CCTNAGC 1 cut(s) 318
BsaI GGTCTC 1 cut(s) 139
BsaJI CCNNGG 2 cut(s) 150, 331
Bsc4I CCNNNNNNNGG 1 cut(s) 283
BseBI CCWGG 2 cut(s) 54, 151
BseDI CCNNGG 2 cut(s) 150, 331
BseGI GGATG 1 cut(s) 29
BseLI CCNNNNNNNGG 1 cut(s) 283
BseMII CTCAG 3 cut(s) 8, 150, 332
BseRI GAGGAG 1 cut(s) 354
BslFI GGGAC 1 cut(s) 228
BslI CCNNNNNNNGG 1 cut(s) 283
BsmAI GTCTC 2 cut(s) 26, 139
BsmFI GGGAC 1 cut(s) 228
Bso31I GGTCTC 1 cut(s) 139
Bsp143I GATC 2 cut(s) 78, 91
BspCNI CTCAG 3 cut(s) 9, 149, 331
BspPI GGATC 2 cut(s) 73, 86
BspTNI GGTCTC 1 cut(s) 139
BssECI CCNNGG 2 cut(s) 150, 331
BssMI GATC 2 cut(s) 78, 91
BssT1I CCWWGG 1 cut(s) 331
Bst2UI CCWGG 2 cut(s) 54, 151
Bst6I CTCTTC 1 cut(s) 204
BstC8I GCNNGC 2 cut(s) 114, 159
BstDEI CTNAG 6 cut(s) 17, 96, 136, 261, 301, 318
BstF5I GGATG 1 cut(s) 29
BstKTI GATC 2 cut(s) 81, 94
BstMAI GTCTC 2 cut(s) 26, 139
BstMBI GATC 2 cut(s) 78, 91
BstMWI GCNNNNNNNGC 1 cut(s) 314
BstNI CCWGG 2 cut(s) 54, 151
BstSCI CCNGG 2 cut(s) 52, 149
BstX2I RGATCY 2 cut(s) 78, 91
BstYI RGATCY 2 cut(s) 78, 91
BtsCI GGATG 1 cut(s) 29
BtsIMutI CAGTG 1 cut(s) 144
Cac8I GCNNGC 2 cut(s) 114, 159
CviAII CATG 1 cut(s) 130
CviJI RGCY 3 cut(s) 116, 317, 387
CviKI_1 RGCY 3 cut(s) 116, 317, 387
DdeI CTNAG 6 cut(s) 17, 96, 136, 261, 301, 318
DpnI GATC 2 cut(s) 80, 93
DpnII GATC 2 cut(s) 78, 91
Eam1104I CTCTTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 204
Eco130I CCWWGG 1 cut(s) 331
Eco31I GGTCTC 1 cut(s) 139
Eco57I CTGAAG 1 cut(s) 239
EcoRII CCWGG 2 cut(s) 52, 149
EcoT14I CCWWGG 1 cut(s) 331
ErhI CCWWGG 1 cut(s) 331
FaeI CATG 1 cut(s) 133
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FaqI GGGAC 1 cut(s) 228
FatI CATG 1 cut(s) 129
FauNDI CATATG 1 cut(s) 310
FokI GGATG 1 cut(s) 16
FspBI CTAG 1 cut(s) 278
Hin1II CATG 1 cut(s) 133
HinfI GANTC 2 cut(s) 19, 273
Hpy188III TCNNGA 1 cut(s) 320
Hpy99I CGWCG 1 cut(s) 49
HpyAV CCTTC 2 cut(s) 214, 362
HpyCH4V TGCA 2 cut(s) 296, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 314
HpyF3I CTNAG 6 cut(s) 17, 96, 136, 261, 301, 318
Hsp92II CATG 1 cut(s) 133
Kzo9I GATC 2 cut(s) 78, 91
LpnPI CCDG 7 cut(s) 39, 66, 98, 136, 163, 305, 389
MaeI CTAG 1 cut(s) 278
MaeIII GTNAC 1 cut(s) 122
MalI GATC 2 cut(s) 80, 93
MboI GATC 2 cut(s) 78, 91
MboII GAAGA 3 cut(s) 61, 221, 335
MflI RGATCY 2 cut(s) 78, 91
MluCI AATT 1 cut(s) 59
MlyI GAGTC 2 cut(s) 28, 267
MmeI TCCRAC 2 cut(s) 123, 250
MnlI CCTC 3 cut(s) 205, 307, 375
MroXI GAANNNNTTC 1 cut(s) 224
MseI TTAA 1 cut(s) 339
MspR9I CCNGG 2 cut(s) 54, 151
MvaI CCWGG 2 cut(s) 54, 151
MwoI GCNNNNNNNGC 1 cut(s) 314
NdeI CATATG 1 cut(s) 310
NdeII GATC 2 cut(s) 78, 91
NlaIII CATG 1 cut(s) 133
PdmI GAANNNNTTC 1 cut(s) 224
PleI GAGTC 2 cut(s) 27, 267
PpsI GAGTC 2 cut(s) 27, 267
Psp6I CCWGG 2 cut(s) 52, 149
PspGI CCWGG 2 cut(s) 52, 149
PsuI RGATCY 2 cut(s) 78, 91
SaqAI TTAA 1 cut(s) 339
Sau3AI GATC 2 cut(s) 78, 91
SchI GAGTC 2 cut(s) 28, 267
ScrFI CCNGG 2 cut(s) 54, 151
SetI ASST 4 cut(s) 55, 345, 354, 389
Sse9I AATT 1 cut(s) 59
SspMI CTAG 1 cut(s) 278
StyD4I CCNGG 2 cut(s) 52, 149
StyI CCWWGG 1 cut(s) 331
TaqI TCGA 1 cut(s) 44
TasI AATT 1 cut(s) 59
Tru1I TTAA 1 cut(s) 339
Tru9I TTAA 1 cut(s) 339
TscAI CASTG 1 cut(s) 144
TspRI CASTG 1 cut(s) 144
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.