RLG00000005202

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
65862693 .. 65863025
333 bp
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UTR
Exon/CDS
Intron
RLM00000005202

Sequence Viewer

Length: 333 bp
ATGACAGGGAAAGACAGTGTGATATTACATGGGATGTGGGCAAGCCCTTACTCTACGAGGGCGGAACTAGCCCTCAAAGTGAAGGGCATACCCTATGAATATGTGGAAGAAGATTTCAAGAACAAAACCCCAGAGCTGCTCAAGTACAACCCAGTTCACAAGAAGATCCCTGTTCTTGTTCGCAAAGGAAAACCTGTTGTTGAGTCTCTTGTCATCCTTCAATATATTGAAGAAGTTTGGAAAGATGGTCCTCAACTTCTCCCAGATGATCCCCACGAAAAGGTTCAAGTTCGATTTTGGGTCCATTTTATGATTTTATCAACACAAAGGTGA

Protein Analysis

111

Amino Acids

12.84

Weight (kDa)

8.8

Isoelectric Point (pI)

31.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 7 - 78 7e-20 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 9 - 78 1.3e-16 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 14 - 78 6.3e-17 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 62
AclWI GGATC 2 cut(s) 160, 263
AfaI GTAC 1 cut(s) 146
AfiI CCNNNNNNNGG 1 cut(s) 280
AgsI TTSAA 4 cut(s) 118, 221, 230, 287
AleI CACNNNNGTG 1 cut(s) 328
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 2 cut(s) 160, 263
ApeKI GCWGC 1 cut(s) 136
Asp700I GAANNNNTTC 1 cut(s) 282
AspS9I GGNCC 2 cut(s) 248, 301
AvaII GGWCC 2 cut(s) 248, 301
BbvI GCAGC 1 cut(s) 123
BccI CCATC 1 cut(s) 239
BcoDI GTCTC 1 cut(s) 210
BfaI CTAG 1 cut(s) 68
BisI GCNGC 1 cut(s) 137
BlsI GCNGC 1 cut(s) 138
Bme18I GGWCC 2 cut(s) 248, 301
BmgT120I GGNCC 2 cut(s) 248, 301
BmiI GGNNCC 1 cut(s) 302
BmrI ACTGGG 1 cut(s) 146
BmuI ACTGGG 1 cut(s) 146
BpuEI CTTGAG 1 cut(s) 125
Bsc4I CCNNNNNNNGG 1 cut(s) 280
Bse1I ACTGG 1 cut(s) 152
BseGI GGATG 2 cut(s) 39, 213
BseLI CCNNNNNNNGG 1 cut(s) 280
BseNI ACTGG 1 cut(s) 152
BseXI GCAGC 1 cut(s) 123
BslI CCNNNNNNNGG 1 cut(s) 280
BsmAI GTCTC 1 cut(s) 210
Bsp143I GATC 2 cut(s) 165, 268
BspACI CCGC 1 cut(s) 62
BspLI GGNNCC 1 cut(s) 302
BspPI GGATC 2 cut(s) 160, 263
BsrI ACTGG 1 cut(s) 152
BssMI GATC 2 cut(s) 165, 268
Bst4CI ACNGT 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 43
BstF5I GGATG 2 cut(s) 39, 213
BstKTI GATC 2 cut(s) 168, 271
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 2 cut(s) 165, 268
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstV1I GCAGC 1 cut(s) 123
BstX2I RGATCY 1 cut(s) 165
BstYI RGATCY 1 cut(s) 165
BtsCI GGATG 2 cut(s) 39, 213
BtsIMutI CAGTG 1 cut(s) 22
Cac8I GCNNGC 1 cut(s) 43
Cfr13I GGNCC 2 cut(s) 248, 301
Csp6I GTAC 1 cut(s) 145
CviAII CATG 1 cut(s) 29
CviJI RGCY 3 cut(s) 45, 71, 136
CviKI_1 RGCY 3 cut(s) 45, 71, 136
CviQI GTAC 1 cut(s) 145
DpnI GATC 2 cut(s) 167, 270
DpnII GATC 2 cut(s) 165, 268
EciI GGCGGA 1 cut(s) 77
Eco47I GGWCC 2 cut(s) 248, 301
FaeI CATG 1 cut(s) 32
FaiI YATR 6 cut(s) 30, 89, 96, 102, 225, 311
FatI CATG 1 cut(s) 28
Fnu4HI GCNGC 1 cut(s) 137
FokI GGATG 2 cut(s) 46, 200
Fsp4HI GCNGC 1 cut(s) 137
FspBI CTAG 1 cut(s) 68
GluI GCNGC 1 cut(s) 137
Hin1II CATG 1 cut(s) 32
HinfI GANTC 1 cut(s) 203
Hpy166II GTNNAC 1 cut(s) 157
Hpy188III TCNNGA 1 cut(s) 118
Hpy8I GTNNAC 1 cut(s) 157
HpyAV CCTTC 2 cut(s) 76, 227
HpyCH4III ACNGT 1 cut(s) 17
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
Hsp92II CATG 1 cut(s) 32
Kzo9I GATC 2 cut(s) 165, 268
LpnPI CCDG 5 cut(s) 144, 165, 183, 207, 276
Lsp1109I GCAGC 1 cut(s) 123
MaeI CTAG 1 cut(s) 68
MalI GATC 2 cut(s) 167, 270
MboI GATC 2 cut(s) 165, 268
MboII GAAGA 4 cut(s) 119, 122, 175, 242
MflI RGATCY 1 cut(s) 165
MlyI GAGTC 1 cut(s) 212
MnlI CCTC 3 cut(s) 51, 83, 261
MroXI GAANNNNTTC 1 cut(s) 282
MslI CAYNNNNRTG 1 cut(s) 328
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeII GATC 2 cut(s) 165, 268
NlaIII CATG 1 cut(s) 32
NlaIV GGNNCC 1 cut(s) 302
OliI CACNNNNGTG 1 cut(s) 328
PdmI GAANNNNTTC 1 cut(s) 282
PkrI GCNGC 1 cut(s) 138
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
PspN4I GGNNCC 1 cut(s) 302
PspPI GGNCC 2 cut(s) 248, 301
PsuI RGATCY 1 cut(s) 165
RsaI GTAC 1 cut(s) 146
RsaNI GTAC 1 cut(s) 145
RseI CAYNNNNRTG 1 cut(s) 328
SatI GCNGC 1 cut(s) 137
Sau3AI GATC 2 cut(s) 165, 268
Sau96I GGNCC 2 cut(s) 248, 301
SchI GAGTC 1 cut(s) 212
SetI ASST 4 cut(s) 138, 196, 285, 332
SinI GGWCC 2 cut(s) 248, 301
SmiMI CAYNNNNRTG 1 cut(s) 328
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
SsiI CCGC 1 cut(s) 62
SspMI CTAG 1 cut(s) 68
TaaI ACNGT 1 cut(s) 17
TaqI TCGA 1 cut(s) 292
TatI WGTACW 1 cut(s) 144
TscAI CASTG 1 cut(s) 22
TseI GCWGC 1 cut(s) 136
TspDTI ATGAA 1 cut(s) 111
TspRI CASTG 1 cut(s) 22
VpaK11BI GGWCC 2 cut(s) 248, 301
XmnI GAANNNNTTC 1 cut(s) 282
XspI CTAG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.