Rmu_sc0007079.1_g000009

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007079.1
Physical Location & Seq
Reverse (-)
29295 .. 32520
3226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007079.1_g000009.1.cds

Sequence Viewer

Length: 855 bp
atggcagagcaaaacaaggtgatcctatacggaatgtggaccagtccctatgttaagagggtggaattggccctcaaggtaaaaggtatacgctatgaatatgtaaatgaagatttgaggaacaaaagtccattgcttctcgagtttaatcctattcataagaaggttcctgtgattgtccacaatggaaaagccattgttgagtctcttgtgatcattgaatatattgatgaaacctggaaaactggccctcaatttgatggcattccttcaatagatgagtacagcaaaaatgtgacattactagatttggtaattctcgcacactttggcggatatgaagctcaggaagaagtcattggcctaaagcttattgactctgagaagactccactggttcctgtacttgttcataatgggaaaaccattgctgagtctcttgtgatcattgaatatattgatgacatcaggactactgaacctcaatttttaccagaagatccatataagaccccaaattcgcttatgggtcagctatatgcaacagagggaggagcacaagagaaagctatcaaggaaatgtttgagaaattaaagttaattgaagagggactcaagggtttgttcccagatggcattgcttcatcaggtgatgagtttagcaaaaatgtgacactactagagttggtcatgttctcatactttggcgcatatgaagctctgcaagaagttcttggcaaaaatgttatgcaagaagtattttcctgcataacagctccagttgagatacctgtggtgaaaaaggcatgtcaccctcatgaaaagatggcgttcctcattgtatttactatttag

Protein Analysis

284

Amino Acids

31.96

Weight (kDa)

5.01

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 88
AciI CCGC 1 cut(s) 333
AclWI GGATC 2 cut(s) 16, 494
AcsI RAATTY 1 cut(s) 517
AfaI GTAC 2 cut(s) 284, 405
AgsI TTSAA 4 cut(s) 221, 273, 452, 605
AjnI CCWGG 1 cut(s) 236
AjuI GAANNNNNNNTTGG 2 cut(s) 342, 374
AluBI AGCT 6 cut(s) 344, 370, 535, 569, 719, 776
AluI AGCT 6 cut(s) 344, 370, 535, 569, 719, 776
Alw21I GWGCWC 1 cut(s) 559
Alw26I GTCTC 2 cut(s) 210, 441
AlwI GGATC 2 cut(s) 16, 494
Ama87I CYCGRG 1 cut(s) 140
AoxI GGCC 3 cut(s) 69, 247, 361
ApoI RAATTY 1 cut(s) 517
ArsI GACNNNNNNTTYG 2 cut(s) 502, 534
AspLEI GCGC 1 cut(s) 710
AspS9I GGNCC 3 cut(s) 39, 70, 248
AsuHPI GGTGA 4 cut(s) 31, 662, 803, 808
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 1 cut(s) 39
BbsI GAAGAC 1 cut(s) 392
Bbv12I GWGCWC 1 cut(s) 559
BccI CCATC 3 cut(s) 254, 626, 820
BciT130I CCWGG 1 cut(s) 238
BclI TGATCA 2 cut(s) 213, 444
BcoDI GTCTC 2 cut(s) 210, 441
BfaI CTAG 2 cut(s) 305, 680
Bme1390I CCNGG 1 cut(s) 238
Bme18I GGWCC 1 cut(s) 39
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 3 cut(s) 39, 70, 248
BmiI GGNNCC 2 cut(s) 168, 399
BmrFI CCNGG 1 cut(s) 238
BpiI GAAGAC 1 cut(s) 392
BpmI CTGGAG 1 cut(s) 762
Bpu10I CCTNAGC 1 cut(s) 345
BpuEI CTTGAG 2 cut(s) 59, 599
Bse1I ACTGG 4 cut(s) 42, 250, 399, 779
Bse3DI GCAATG 3 cut(s) 131, 426, 636
BseBI CCWGG 1 cut(s) 238
BseMI GCAATG 3 cut(s) 131, 426, 636
BseMII CTCAG 3 cut(s) 359, 372, 423
BseNI ACTGG 4 cut(s) 42, 250, 399, 779
BseRI GAGGAG 1 cut(s) 567
BshFI GGCC 3 cut(s) 71, 249, 363
BsiHKAI GWGCWC 1 cut(s) 559
BsiHKCI CYCGRG 1 cut(s) 140
BslFI GGGAC 2 cut(s) 30, 624
BsmAI GTCTC 2 cut(s) 210, 441
BsmFI GGGAC 2 cut(s) 30, 624
BsmI GAATGC 1 cut(s) 264
BsnI GGCC 3 cut(s) 71, 249, 363
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 559
Bsp143I GATC 4 cut(s) 21, 213, 444, 499
BspACI CCGC 1 cut(s) 333
BspANI GGCC 3 cut(s) 71, 249, 363
BspCNI CTCAG 3 cut(s) 358, 373, 424
BspHI TCATGA 1 cut(s) 817
BspLI GGNNCC 2 cut(s) 168, 399
BspPI GGATC 2 cut(s) 16, 494
BsrDI GCAATG 3 cut(s) 131, 426, 636
BsrI ACTGG 4 cut(s) 42, 250, 399, 779
BssMI GATC 4 cut(s) 21, 213, 444, 499
BssNAI GTATAC 1 cut(s) 89
Bst1107I GTATAC 1 cut(s) 89
Bst2UI CCWGG 1 cut(s) 238
Bst6I CTCTTC 1 cut(s) 600
BstDEI CTNAG 3 cut(s) 345, 381, 432
BstHHI GCGC 1 cut(s) 710
BstKTI GATC 4 cut(s) 24, 216, 447, 502
BstMAI GTCTC 2 cut(s) 210, 441
BstMBI GATC 4 cut(s) 21, 213, 444, 499
BstMWI GCNNNNNNNGC 1 cut(s) 716
BstNI CCWGG 1 cut(s) 238
BstNSI RCATGY 1 cut(s) 810
BstSCI CCNGG 1 cut(s) 236
BstV2I GAAGAC 1 cut(s) 392
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
BstZ17I GTATAC 1 cut(s) 89
BsuRI GGCC 3 cut(s) 71, 249, 363
BtsIMutI CAGTG 1 cut(s) 392
CciI TCATGA 1 cut(s) 817
CfoI GCGC 1 cut(s) 710
Cfr13I GGNCC 3 cut(s) 39, 70, 248
Csp6I GTAC 2 cut(s) 283, 404
CviAII CATG 3 cut(s) 691, 807, 818
CviQI GTAC 2 cut(s) 283, 404
DdeI CTNAG 3 cut(s) 345, 381, 432
DpnI GATC 4 cut(s) 23, 215, 446, 501
DpnII GATC 4 cut(s) 21, 213, 444, 499
Eam1104I CTCTTC 1 cut(s) 600
EarI CTCTTC 1 cut(s) 600
EciI GGCGGA 1 cut(s) 348
Eco47I GGWCC 1 cut(s) 39
Eco88I CYCGRG 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 236
FaeI CATG 3 cut(s) 694, 810, 821
FalI AAGNNNNNCTT 2 cut(s) 717, 749
FaqI GGGAC 2 cut(s) 30, 624
FatI CATG 3 cut(s) 690, 806, 817
FauNDI CATATG 1 cut(s) 712
FbaI TGATCA 2 cut(s) 213, 444
FblI GTMKAC 1 cut(s) 88
FspBI CTAG 2 cut(s) 305, 680
GlaI GCGC 1 cut(s) 709
GsuI CTGGAG 1 cut(s) 762
HaeIII GGCC 3 cut(s) 71, 249, 363
HhaI GCGC 1 cut(s) 710
Hin1II CATG 3 cut(s) 694, 810, 821
Hin6I GCGC 1 cut(s) 708
HinP1I GCGC 1 cut(s) 708
HindIII AAGCTT 1 cut(s) 368
HinfI GANTC 5 cut(s) 203, 377, 388, 434, 612
HphI GGTGA 4 cut(s) 31, 662, 803, 808
Hpy166II GTNNAC 3 cut(s) 39, 89, 181
Hpy188I TCNGA 1 cut(s) 382
Hpy188III TCNNGA 4 cut(s) 140, 347, 469, 818
Hpy8I GTNNAC 3 cut(s) 39, 89, 181
HpyAV CCTTC 2 cut(s) 157, 279
HpyCH4V TGCA 4 cut(s) 542, 724, 751, 768
HpyF10VI GCNNNNNNNGC 1 cut(s) 716
HpyF3I CTNAG 3 cut(s) 345, 381, 432
Hsp92II CATG 3 cut(s) 694, 810, 821
HspAI GCGC 1 cut(s) 708
Ksp22I TGATCA 2 cut(s) 213, 444
Kzo9I GATC 4 cut(s) 21, 213, 444, 499
LmnI GCTCC 2 cut(s) 554, 781
MaeI CTAG 2 cut(s) 305, 680
MaeIII GTNAC 3 cut(s) 295, 670, 809
MalI GATC 4 cut(s) 23, 215, 446, 501
MboI GATC 4 cut(s) 21, 213, 444, 499
MboII GAAGA 5 cut(s) 122, 362, 397, 509, 617
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 1 cut(s) 559
MluCI AATT 7 cut(s) 65, 254, 315, 485, 517, 590, 600
MlyI GAGTC 5 cut(s) 212, 371, 382, 443, 606
MseI TTAA 4 cut(s) 54, 147, 593, 599
MslI CAYNNNNRTG 1 cut(s) 816
MspR9I CCNGG 1 cut(s) 238
Mva1269I GAATGC 1 cut(s) 264
MvaI CCWGG 1 cut(s) 238
MwoI GCNNNNNNNGC 1 cut(s) 716
NdeI CATATG 1 cut(s) 712
NdeII GATC 4 cut(s) 21, 213, 444, 499
NlaIII CATG 3 cut(s) 694, 810, 821
NlaIV GGNNCC 2 cut(s) 168, 399
NmuCI GTSAC 3 cut(s) 295, 670, 809
NspI RCATGY 1 cut(s) 810
PaeR7I CTCGAG 1 cut(s) 140
PagI TCATGA 1 cut(s) 817
PctI GAATGC 1 cut(s) 264
PleI GAGTC 5 cut(s) 211, 371, 382, 442, 606
PpsI GAGTC 5 cut(s) 211, 371, 382, 442, 606
Psp6I CCWGG 1 cut(s) 236
PspGI CCWGG 1 cut(s) 236
PspN4I GGNNCC 2 cut(s) 168, 399
PspPI GGNCC 3 cut(s) 39, 70, 248
PsuI RGATCY 1 cut(s) 499
RsaI GTAC 2 cut(s) 284, 405
RsaNI GTAC 2 cut(s) 283, 404
RseI CAYNNNNRTG 1 cut(s) 816
SaqAI TTAA 4 cut(s) 54, 147, 593, 599
Sau3AI GATC 4 cut(s) 21, 213, 444, 499
Sau96I GGNCC 3 cut(s) 39, 70, 248
SchI GAGTC 5 cut(s) 212, 371, 382, 443, 606
ScrFI CCNGG 1 cut(s) 238
SduI GDGCHC 1 cut(s) 559
Sfr274I CTCGAG 1 cut(s) 140
SinI GGWCC 1 cut(s) 39
SlaI CTCGAG 1 cut(s) 140
SmiMI CAYNNNNRTG 1 cut(s) 816
SmlI CTYRAG 3 cut(s) 74, 140, 614
SmoI CTYRAG 3 cut(s) 74, 140, 614
Sse9I AATT 7 cut(s) 65, 254, 315, 485, 517, 590, 600
SsiI CCGC 1 cut(s) 333
SspMI CTAG 2 cut(s) 305, 680
StyD4I CCNGG 1 cut(s) 236
TaqI TCGA 1 cut(s) 141
TasI AATT 7 cut(s) 65, 254, 315, 485, 517, 590, 600
TatI WGTACW 2 cut(s) 282, 403
Tru1I TTAA 4 cut(s) 54, 147, 593, 599
Tru9I TTAA 4 cut(s) 54, 147, 593, 599
TscAI CASTG 1 cut(s) 399
TseFI GTSAC 3 cut(s) 295, 670, 809
Tsp45I GTSAC 3 cut(s) 295, 670, 809
TspDTI ATGAA 9 cut(s) 111, 123, 146, 246, 354, 401, 633, 729, 834
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 1 cut(s) 399
VpaK11BI GGWCC 1 cut(s) 39
XapI RAATTY 1 cut(s) 517
XceI RCATGY 1 cut(s) 810
XhoI CTCGAG 1 cut(s) 140
XmiI GTMKAC 1 cut(s) 88
XspI CTAG 2 cut(s) 305, 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.