Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000433

Physical Location & Seq

Genomic Coordinates Reverse (-)

15703088 .. 15704309

Gene Structure 1222 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G191500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 696 bp

ATGGCAGAGGAAAACAAAGTGACCCTATATGGAATGTGGTCAAGCCCTTATGTTAAGAGGGTGGAATTGGCTCTCAGACTCAAAGGCATACCCTATGAATATGTGGAAGAAGATTTGAGGAACAAAAGCCAGTTGCTCCTCAAACTGAATCCCATTCATCAGAAAGTTCCAGTACTTGTCCACAATGGAAAAACAATTGTTGAGTCTCTTGTCATCCTTGAATATATTGATGAAACCTGGAAAACTGGCCCTCAACTTCTACCAGAAGATCCCTATAAACGATCCCAAGTTCGCTTCTGGGCAAGCTATCTGCAACAGGTGTTTGAGAGCATGGTCTCAGTGCTCAAAACCAGTGGACAAGCACAAGAGAAAGCCATTAAAGAAGTGACTGAGAAACTCAAGTTACTTGAAGAGGGATTGAAGGGTTTCTTCCCAAATGGCTTTCCAAATTCATTTGACATAGAAAATGTGGGACTACTAGAGGTGGTCATTTGTTCACATTTTGGTGCAAATGAAGCTCAGGAAGAAGCCCTTGGAGTGAAAGTTATAACCCCCGAGAAGACTCCACTAATTTATTCCTCCATAACAGCTCTGACTGAGATCCCTGCGGTGAAGGCGGCGAGCATTCCTCATGAGAAGGTGGTGGCTTTCCTCAAGTTCTTTAGAGAAAAGGCCCTCAAATCTTCTGCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

232

Amino Acids

26.11

Weight (kDa)

6.17

Isoelectric Point (pI)

38.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62480 AT5G62480 AT5G62480
fragaria_vesca	FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica	MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica	Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis	pycom06g17020
rosa_chinensis	RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata	RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora	Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa	Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha	Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana	Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	548
AciI	CCGC	2 cut(s)	608, 617
AclWI	GGATC	3 cut(s)	263, 276, 595
AcsI	RAATTY	1 cut(s)	448
AfaI	GTAC	1 cut(s)	174
AgsI	TTSAA	3 cut(s)	221, 410, 421
AjnI	CCWGG	1 cut(s)	236
AjuI	GAANNNNNNNTTGG	2 cut(s)	516, 548
AluBI	AGCT	3 cut(s)	306, 518, 590
AluI	AGCT	3 cut(s)	306, 518, 590
Alw21I	GWGCWC	1 cut(s)	345
Alw26I	GTCTC	2 cut(s)	210, 340
AlwI	GGATC	3 cut(s)	263, 276, 595
Ama87I	CYCGRG	1 cut(s)	554
AoxI	GGCC	2 cut(s)	247, 672
ApoI	RAATTY	1 cut(s)	448
Asp700I	GAANNNNTTC	1 cut(s)	425
AspS9I	GGNCC	2 cut(s)	248, 673
AsuHPI	GGTGA	1 cut(s)	622
AvaI	CYCGRG	1 cut(s)	554
BbsI	GAAGAC	1 cut(s)	566
Bbv12I	GWGCWC	1 cut(s)	345
BciT130I	CCWGG	1 cut(s)	238
BcoDI	GTCTC	2 cut(s)	210, 340
BfaI	CTAG	1 cut(s)	479
BfmI	CTRYAG	1 cut(s)	687
BisI	GCNGC	1 cut(s)	618
BlsI	GCNGC	1 cut(s)	619
BmcAI	AGTACT	1 cut(s)	174
Bme1390I	CCNGG	1 cut(s)	238
BmeT110I	CYCGRG	1 cut(s)	554
BmgT120I	GGNCC	2 cut(s)	248, 673
BmrFI	CCNGG	1 cut(s)	238
BpiI	GAAGAC	1 cut(s)	566
BplI	GAGNNNNNCTC	2 cut(s)	613, 645
Bpu10I	CCTNAGC	1 cut(s)	519
BpuEI	CTTGAG	2 cut(s)	383, 638
BsaI	GGTCTC	1 cut(s)	340
BsaJI	CCNNGG	1 cut(s)	532
BsaXI	ACNNNNNCTCC	2 cut(s)	528, 558
Bse1I	ACTGG	4 cut(s)	130, 170, 250, 351
BseBI	CCWGG	1 cut(s)	238
BseDI	CCNNGG	1 cut(s)	532
BseGI	GGATG	1 cut(s)	213
BseMII	CTCAG	5 cut(s)	88, 351, 381, 533, 588
BseNI	ACTGG	4 cut(s)	130, 170, 250, 351
BseRI	GAGGAG	1 cut(s)	128
BshFI	GGCC	2 cut(s)	249, 674
BsiHKAI	GWGCWC	1 cut(s)	345
BsiHKCI	CYCGRG	1 cut(s)	554
BslFI	GGGAC	1 cut(s)	486
BsmAI	GTCTC	2 cut(s)	210, 340
BsmFI	GGGAC	1 cut(s)	486
BsmI	GAATGC	1 cut(s)	624
BsnI	GGCC	2 cut(s)	249, 674
Bso31I	GGTCTC	1 cut(s)	340
BsoBI	CYCGRG	1 cut(s)	554
Bsp1286I	GDGCHC	1 cut(s)	345
Bsp143I	GATC	3 cut(s)	268, 281, 600
BspACI	CCGC	2 cut(s)	608, 617
BspANI	GGCC	2 cut(s)	249, 674
BspCNI	CTCAG	5 cut(s)	87, 350, 382, 532, 589
BspHI	TCATGA	1 cut(s)	631
BspMAI	CTGCAG	1 cut(s)	691
BspPI	GGATC	3 cut(s)	263, 276, 595
BspTNI	GGTCTC	1 cut(s)	340
BsrI	ACTGG	4 cut(s)	130, 170, 250, 351
BssECI	CCNNGG	1 cut(s)	532
BssMI	GATC	3 cut(s)	268, 281, 600
BssT1I	CCWWGG	1 cut(s)	532
Bst2UI	CCWGG	1 cut(s)	238
Bst6I	CTCTTC	1 cut(s)	405
BstC8I	GCNNGC	2 cut(s)	304, 622
BstDEI	CTNAG	5 cut(s)	74, 337, 390, 519, 597
BstF5I	GGATG	1 cut(s)	213
BstKTI	GATC	3 cut(s)	271, 284, 603
BstMAI	GTCTC	2 cut(s)	210, 340
BstMBI	GATC	3 cut(s)	268, 281, 600
BstMWI	GCNNNNNNNGC	2 cut(s)	515, 614
BstNI	CCWGG	1 cut(s)	238
BstSCI	CCNGG	1 cut(s)	236
BstSFI	CTRYAG	1 cut(s)	687
BstV2I	GAAGAC	1 cut(s)	566
BstX2I	RGATCY	2 cut(s)	268, 600
BstYI	RGATCY	2 cut(s)	268, 600
BsuRI	GGCC	2 cut(s)	249, 674
BtsCI	GGATG	1 cut(s)	213
BtsIMutI	CAGTG	2 cut(s)	345, 358
Cac8I	GCNNGC	2 cut(s)	304, 622
CciI	TCATGA	1 cut(s)	631
Cfr13I	GGNCC	2 cut(s)	248, 673
Csp6I	GTAC	1 cut(s)	173
CspCI	CAANNNNNGTGG	2 cut(s)	334, 369
CviAII	CATG	2 cut(s)	331, 632
CviQI	GTAC	1 cut(s)	173
DdeI	CTNAG	5 cut(s)	74, 337, 390, 519, 597
DpnI	GATC	3 cut(s)	270, 283, 602
DpnII	GATC	3 cut(s)	268, 281, 600
Eam1104I	CTCTTC	1 cut(s)	405
EarI	CTCTTC	1 cut(s)	405
Eco130I	CCWWGG	1 cut(s)	532
Eco31I	GGTCTC	1 cut(s)	340
Eco88I	CYCGRG	1 cut(s)	554
EcoO109I	RGGNCCY	1 cut(s)	673
EcoRII	CCWGG	1 cut(s)	236
EcoT14I	CCWWGG	1 cut(s)	532
ErhI	CCWWGG	1 cut(s)	532
FaeI	CATG	2 cut(s)	334, 635
FalI	AAGNNNNNCTT	4 cut(s)	413, 445, 516, 548
FaqI	GGGAC	1 cut(s)	486
FatI	CATG	2 cut(s)	330, 631
Fnu4HI	GCNGC	1 cut(s)	618
FokI	GGATG	1 cut(s)	200
Fsp4HI	GCNGC	1 cut(s)	618
FspBI	CTAG	1 cut(s)	479
GluI	GCNGC	1 cut(s)	618
HaeIII	GGCC	2 cut(s)	249, 674
Hin1II	CATG	2 cut(s)	334, 635
HinfI	GANTC	4 cut(s)	78, 148, 203, 562
HphI	GGTGA	1 cut(s)	622
Hpy166II	GTNNAC	3 cut(s)	181, 356, 497
Hpy188I	TCNGA	3 cut(s)	77, 162, 594
Hpy188III	TCNNGA	2 cut(s)	521, 632
Hpy8I	GTNNAC	3 cut(s)	181, 356, 497
HpyAV	CCTTC	3 cut(s)	415, 607, 631
HpyCH4V	TGCA	3 cut(s)	313, 509, 689
HpyF10VI	GCNNNNNNNGC	2 cut(s)	515, 614
HpyF3I	CTNAG	5 cut(s)	74, 337, 390, 519, 597
Hsp92II	CATG	2 cut(s)	334, 635
Kzo9I	GATC	3 cut(s)	268, 281, 600
LmnI	GCTCC	1 cut(s)	141
MaeI	CTAG	1 cut(s)	479
MaeIII	GTNAC	3 cut(s)	19, 385, 402
MalI	GATC	3 cut(s)	270, 283, 602
MboI	GATC	3 cut(s)	268, 281, 600
MboII	GAAGA	8 cut(s)	119, 122, 278, 421, 422, 536, 571, 675
MfeI	CAATTG	1 cut(s)	195
MflI	RGATCY	2 cut(s)	268, 600
MhlI	GDGCHC	1 cut(s)	345
MluCI	AATT	4 cut(s)	65, 195, 448, 570
MlyI	GAGTC	3 cut(s)	72, 212, 556
MroXI	GAANNNNTTC	1 cut(s)	425
MseI	TTAA	2 cut(s)	54, 378
MslI	CAYNNNNRTG	1 cut(s)	504
MspR9I	CCNGG	1 cut(s)	238
MunI	CAATTG	1 cut(s)	195
Mva1269I	GAATGC	1 cut(s)	624
MvaI	CCWGG	1 cut(s)	238
MwoI	GCNNNNNNNGC	2 cut(s)	515, 614
NdeII	GATC	3 cut(s)	268, 281, 600
NlaIII	CATG	2 cut(s)	334, 635
NmuCI	GTSAC	2 cut(s)	19, 385
PagI	TCATGA	1 cut(s)	631
PctI	GAATGC	1 cut(s)	624
PdmI	GAANNNNTTC	1 cut(s)	425
PfeI	GAWTC	1 cut(s)	148
PkrI	GCNGC	1 cut(s)	619
PleI	GAGTC	3 cut(s)	72, 211, 556
PpsI	GAGTC	3 cut(s)	72, 211, 556
PsiI	TTATAA	1 cut(s)	548
Psp6I	CCWGG	1 cut(s)	236
PspGI	CCWGG	1 cut(s)	236
PspPI	GGNCC	2 cut(s)	248, 673
PstI	CTGCAG	1 cut(s)	691
PsuI	RGATCY	2 cut(s)	268, 600
RsaI	GTAC	1 cut(s)	174
RsaNI	GTAC	1 cut(s)	173
RseI	CAYNNNNRTG	1 cut(s)	504
SaqAI	TTAA	2 cut(s)	54, 378
SatI	GCNGC	1 cut(s)	618
Sau3AI	GATC	3 cut(s)	268, 281, 600
Sau96I	GGNCC	2 cut(s)	248, 673
ScaI	AGTACT	1 cut(s)	174
SchI	GAGTC	3 cut(s)	72, 212, 556
ScrFI	CCNGG	1 cut(s)	238
SduI	GDGCHC	1 cut(s)	345
SetI	ASST	7 cut(s)	239, 308, 321, 486, 520, 592, 642
SfcI	CTRYAG	1 cut(s)	687
SmiMI	CAYNNNNRTG	1 cut(s)	504
SmlI	CTYRAG	2 cut(s)	398, 653
SmoI	CTYRAG	2 cut(s)	398, 653
Sse9I	AATT	4 cut(s)	65, 195, 448, 570
SsiI	CCGC	2 cut(s)	608, 617
SspMI	CTAG	1 cut(s)	479
StyD4I	CCNGG	1 cut(s)	236
StyI	CCWWGG	1 cut(s)	532
TasI	AATT	4 cut(s)	65, 195, 448, 570
TatI	WGTACW	1 cut(s)	172
TauI	GCSGC	1 cut(s)	620
TfiI	GAWTC	1 cut(s)	148
Tru1I	TTAA	2 cut(s)	54, 378
Tru9I	TTAA	2 cut(s)	54, 378
TscAI	CASTG	2 cut(s)	345, 358
TseFI	GTSAC	2 cut(s)	19, 385
Tsp45I	GTSAC	2 cut(s)	19, 385
TspDTI	ATGAA	5 cut(s)	111, 146, 246, 441, 528
TspRI	CASTG	2 cut(s)	345, 358
XapI	RAATTY	1 cut(s)	448
XmnI	GAANNNNTTC	1 cut(s)	425
XspI	CTAG	1 cut(s)	479
ZrmI	AGTACT	1 cut(s)	174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.