RLG00000005203

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
65874869 .. 65875684
816 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005203

Sequence Viewer

Length: 609 bp
ATGGCAGAGGAAAATGTGGTGAGTCTACATGGAATGTGGGCTAGTCCTTTCTCTAAGAGTGTAGAGCTGGCCCTGAAAACAAAAGGCATTCCCTTTGAGTTTGTTGAAGAAGATTTGAGGAACAAGAGTCCATCACTCCTGAAATACAATCCTGTTCACAAAAAGCTTCTGCCGGAGGATCCTTACAAAAGGACTCAAGTTCGCTTCTGGGCTAGCTTTCTCCAGCAACATGTATTTGAGACCATGTCCCTGGTATGCAAAACTGATGGAGAAGTACAAGAGAAGGCCATCAAAGAATTGTTTGGGAAATTAAAGACATTTGAAGAGGGAATCAAGGACTTATTCCCAGATGGTGCGCCTTCTATTGACTGCAGCAACAATCTGGGGCTTCTGGACATTGTATTGTGTTCACAGTTTGGCCCTCATAAAGTTCAGGAAGAAGTGCTTGGTATAACAACTATTGACCCAGAGAAAAATCCACTCTTGTTTACTTGGCTGAAATCTCTGAATGAGCTGCCTTCAGTGAAAGAGTTAACCCCTCCTTATGAAAAGCTAGTAGCAGTTCTTCACTTTTTCAGAAACTATGCCCTCAAATCTAGTGCTGCTTAA

Protein Analysis

203

Amino Acids

22.91

Weight (kDa)

5.99

Isoelectric Point (pI)

40.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 7 - 55 6.7e-06 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 9 - 54 6.6e-07 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 25
AclWI GGATC 2 cut(s) 173, 186
AcuI CTGAAG 1 cut(s) 504
AfaI GTAC 1 cut(s) 276
AflIII ACRYGT 1 cut(s) 229
AgsI TTSAA 2 cut(s) 107, 323
AjnI CCWGG 1 cut(s) 249
AjuI GAANNNNNNNTTGG 2 cut(s) 429, 461
AluBI AGCT 5 cut(s) 67, 166, 216, 514, 553
AluI AGCT 5 cut(s) 67, 166, 216, 514, 553
Alw26I GTCTC 1 cut(s) 233
AlwI GGATC 2 cut(s) 173, 186
AoxI GGCC 3 cut(s) 69, 285, 418
ApeKI GCWGC 3 cut(s) 372, 514, 602
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 2 cut(s) 70, 419
AsuHPI GGTGA 1 cut(s) 31
AsuNHI GCTAGC 1 cut(s) 212
BamHI GGATCC 1 cut(s) 178
BarI GAAGNNNNNNTAC 2 cut(s) 549, 581
BbvI GCAGC 3 cut(s) 384, 501, 589
BccI CCATC 4 cut(s) 139, 260, 296, 344
BciT130I CCWGG 1 cut(s) 251
BcoDI GTCTC 1 cut(s) 233
BfaI CTAG 4 cut(s) 42, 213, 554, 597
BfmI CTRYAG 1 cut(s) 370
BisI GCNGC 3 cut(s) 373, 515, 603
BlsI GCNGC 3 cut(s) 374, 516, 604
Bme1390I CCNGG 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 70, 419
BmiI GGNNCC 1 cut(s) 180
BmrFI CCNGG 1 cut(s) 251
BmtI GCTAGC 1 cut(s) 216
BpmI CTGGAG 1 cut(s) 206
BpuEI CTTGAG 1 cut(s) 180
BsaI GGTCTC 1 cut(s) 233
BsaJI CCNNGG 1 cut(s) 249
BseBI CCWGG 1 cut(s) 251
BseDI CCNNGG 1 cut(s) 249
BseXI GCAGC 3 cut(s) 384, 501, 589
BshFI GGCC 3 cut(s) 71, 287, 420
BsiSI CCGG 1 cut(s) 173
BslFI GGGAC 1 cut(s) 232
BsmAI GTCTC 1 cut(s) 233
BsmFI GGGAC 1 cut(s) 232
BsmI GAATGC 1 cut(s) 87
BsnI GGCC 3 cut(s) 71, 287, 420
Bso31I GGTCTC 1 cut(s) 233
Bsp143I GATC 1 cut(s) 178
BspANI GGCC 3 cut(s) 71, 287, 420
BspLI GGNNCC 1 cut(s) 180
BspMAI CTGCAG 1 cut(s) 374
BspOI GCTAGC 1 cut(s) 216
BspPI GGATC 2 cut(s) 173, 186
BspTNI GGTCTC 1 cut(s) 233
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 1 cut(s) 178
Bst2UI CCWGG 1 cut(s) 251
Bst4CI ACNGT 1 cut(s) 414
Bst6I CTCTTC 1 cut(s) 318
BstC8I GCNNGC 2 cut(s) 69, 214
BstDEI CTNAG 1 cut(s) 54
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 1 cut(s) 181
BstMAI GTCTC 1 cut(s) 233
BstMBI GATC 1 cut(s) 178
BstNI CCWGG 1 cut(s) 251
BstNSI RCATGY 1 cut(s) 233
BstSCI CCNGG 1 cut(s) 249
BstSFI CTRYAG 1 cut(s) 370
BstV1I GCAGC 3 cut(s) 384, 501, 589
BstX2I RGATCY 1 cut(s) 178
BstXI CCANNNNNNTGG 1 cut(s) 250
BstYI RGATCY 1 cut(s) 178
BsuRI GGCC 3 cut(s) 71, 287, 420
BtsIMutI CAGTG 1 cut(s) 528
Cac8I GCNNGC 2 cut(s) 69, 214
CfoI GCGC 1 cut(s) 358
Cfr13I GGNCC 2 cut(s) 70, 419
Csp6I GTAC 1 cut(s) 275
CviAII CATG 3 cut(s) 29, 230, 244
CviQI GTAC 1 cut(s) 275
DdeI CTNAG 1 cut(s) 54
DpnI GATC 1 cut(s) 180
DpnII GATC 1 cut(s) 178
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Eco31I GGTCTC 1 cut(s) 233
Eco57I CTGAAG 1 cut(s) 504
EcoRII CCWGG 1 cut(s) 249
FaeI CATG 3 cut(s) 32, 233, 247
FaiI YATR 8 cut(s) 30, 231, 245, 256, 426, 452, 546, 585
FalI AAGNNNNNCTT 2 cut(s) 429, 461
FaqI GGGAC 1 cut(s) 232
FatI CATG 3 cut(s) 28, 229, 243
FblI GTMKAC 1 cut(s) 25
Fnu4HI GCNGC 3 cut(s) 373, 515, 603
Fsp4HI GCNGC 3 cut(s) 373, 515, 603
FspBI CTAG 4 cut(s) 42, 213, 554, 597
GlaI GCGC 1 cut(s) 357
GluI GCNGC 3 cut(s) 373, 515, 603
GsuI CTGGAG 1 cut(s) 206
HaeIII GGCC 3 cut(s) 71, 287, 420
HapII CCGG 1 cut(s) 173
HhaI GCGC 1 cut(s) 358
Hin1II CATG 3 cut(s) 32, 233, 247
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 1 cut(s) 534
HindII GTYRAC 1 cut(s) 534
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 4 cut(s) 22, 127, 193, 330
HpaI GTTAAC 1 cut(s) 534
HpaII CCGG 1 cut(s) 173
HphI GGTGA 1 cut(s) 31
Hpy166II GTNNAC 5 cut(s) 26, 157, 410, 489, 534
Hpy188I TCNGA 2 cut(s) 507, 578
Hpy188III TCNNGA 3 cut(s) 139, 392, 434
Hpy8I GTNNAC 5 cut(s) 26, 157, 410, 489, 534
HpyAV CCTTC 3 cut(s) 277, 369, 528
HpyCH4III ACNGT 1 cut(s) 414
HpyCH4V TGCA 2 cut(s) 258, 372
HpyF3I CTNAG 1 cut(s) 54
Hsp92II CATG 3 cut(s) 32, 233, 247
HspAI GCGC 1 cut(s) 356
KspAI GTTAAC 1 cut(s) 534
Kzo9I GATC 1 cut(s) 178
Lsp1109I GCAGC 3 cut(s) 384, 501, 589
MaeI CTAG 4 cut(s) 42, 213, 554, 597
MalI GATC 1 cut(s) 180
MboI GATC 1 cut(s) 178
MboII GAAGA 5 cut(s) 119, 122, 335, 449, 557
MflI RGATCY 1 cut(s) 178
MluCI AATT 2 cut(s) 296, 308
MlyI GAGTC 3 cut(s) 31, 136, 187
MnlI CCTC 6 cut(s) 111, 169, 319, 432, 549, 599
MseI TTAA 3 cut(s) 311, 533, 607
MspI CCGG 1 cut(s) 173
MspR9I CCNGG 1 cut(s) 251
Mva1269I GAATGC 1 cut(s) 87
MvaI CCWGG 1 cut(s) 251
NdeII GATC 1 cut(s) 178
NheI GCTAGC 1 cut(s) 212
NlaIII CATG 3 cut(s) 32, 233, 247
NlaIV GGNNCC 1 cut(s) 180
NspI RCATGY 1 cut(s) 233
PciI ACATGT 1 cut(s) 229
PctI GAATGC 1 cut(s) 87
PfeI GAWTC 1 cut(s) 330
PflFI GACNNNGTC 1 cut(s) 244
PkrI GCNGC 3 cut(s) 374, 516, 604
PleI GAGTC 3 cut(s) 30, 135, 187
PpsI GAGTC 3 cut(s) 30, 135, 187
PscI ACATGT 1 cut(s) 229
Psp6I CCWGG 1 cut(s) 249
PspGI CCWGG 1 cut(s) 249
PspN4I GGNNCC 1 cut(s) 180
PspPI GGNCC 2 cut(s) 70, 419
PstI CTGCAG 1 cut(s) 374
PsuI RGATCY 1 cut(s) 178
PsyI GACNNNGTC 1 cut(s) 244
RsaI GTAC 1 cut(s) 276
RsaNI GTAC 1 cut(s) 275
SaqAI TTAA 3 cut(s) 311, 533, 607
SatI GCNGC 3 cut(s) 373, 515, 603
Sau3AI GATC 1 cut(s) 178
Sau96I GGNCC 2 cut(s) 70, 419
SchI GAGTC 3 cut(s) 31, 136, 187
ScrFI CCNGG 1 cut(s) 251
SetI ASST 5 cut(s) 69, 168, 218, 516, 555
SfcI CTRYAG 1 cut(s) 370
SmlI CTYRAG 1 cut(s) 195
SmoI CTYRAG 1 cut(s) 195
Sse9I AATT 2 cut(s) 296, 308
SspMI CTAG 4 cut(s) 42, 213, 554, 597
StyD4I CCNGG 1 cut(s) 249
TaaI ACNGT 1 cut(s) 414
TasI AATT 2 cut(s) 296, 308
TatI WGTACW 1 cut(s) 274
TfiI GAWTC 1 cut(s) 330
Tru1I TTAA 3 cut(s) 311, 533, 607
Tru9I TTAA 3 cut(s) 311, 533, 607
TscAI CASTG 1 cut(s) 528
TseI GCWGC 3 cut(s) 372, 514, 602
TspDTI ATGAA 1 cut(s) 561
TspRI CASTG 1 cut(s) 528
Tth111I GACNNNGTC 1 cut(s) 244
XceI RCATGY 1 cut(s) 233
XmiI GTMKAC 1 cut(s) 25
XspI CTAG 4 cut(s) 42, 213, 554, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.