Rorug06G0440000

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
57310705 .. 57311984
1280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0440000.1

Sequence Viewer

Length: 912 bp
ATGGTAGGCGTTTTCCGCCGCTCTCTTTCCTTCCCAAACAAACCAAATACCAACCGTCCGTCCAAACCTAGCTTGGCTCGTCACACCAGATCTGTAAGTCTTCCATGCAGATCTCACCCATTGATCTCTCAGCTCAAGGACCACATCTCCGAGCTCCAATCATGGTCCTCCAAGTGTGATTCCTCCTCCGCTTGGCTCGTCGACGGCCTGACCCGCCTGACGGAGTTGCACCACTGCCTTGACGACACTCTTCAGCTTCCACAGACCCAAGAAGCCCTCCGCCGCCAGCCACACTACTCATCCATCGAGAACCTTCTAGAACAGTTCCTCCGCTTCGTCGACGTGTACGGCATCTTCCGGAGCTCCGTTTTGGCTCTCAAGGAGGAGCACTCGGCGGCTCAAGTGGCTATGAGGAAGAGAGACGAGTCTAAGATTGCCTTGTACGTGAAAGCCCGAAAGAGAATGGCCATAGAAATGTCTAAGATCGTGAACGAAGTTCGCTTCTGTACTAGGTCATCTGAGTCTGTCTCTCCTAACAGTGTTAACGTCGGAGATGTTGAGCTCGCCGCCGTTGTGAGCGACGTCGTTCAGGTGACGGTGACGGTGTCTGTTTCACTCTTTAACGGAATTGCATTGTCATTTGGGCCGCGAAAATCAATCACGTGGATGAATATGGAGATGGTGAAGAAAGGCAAGGTTGATAATCAGGATCAAGGGATTCATGAGTTTGAACAAGTTGGGATTAAGAGCTTGTTGGATTTGAGGAAGAAAGGAGATGAAGAGGTCAAGATGACTTTGAAGAAAATGCGAGAATTGGAGACCTCCATTGAAGGAATTGAAACTTGCACTGAAAGAGTTTTTAGGGGTTTGATTAACGCAAGGGTTGCGCTGCTCAACACTCTTACTAGCTAA

Protein Analysis

303

Amino Acids

34.2

Weight (kDa)

9.28

Isoelectric Point (pI)

53.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BPS1 PF03087 69 - 299 8.6e-54 Protein BPS1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 585
AccBSI CCGCTC 1 cut(s) 21
AccI GTMKAC 2 cut(s) 201, 339
AccII CGCG 1 cut(s) 649
AccIII TCCGGA 1 cut(s) 357
AclWI GGATC 1 cut(s) 717
AcoI YGGCCR 1 cut(s) 465
AcuI CTGAAG 1 cut(s) 236
AcvI CACGTG 1 cut(s) 663
AcyI GRCGYC 1 cut(s) 582
AfaI GTAC 3 cut(s) 347, 443, 508
AfiI CCNNNNNNNGG 2 cut(s) 192, 220
AflIII ACRYGT 1 cut(s) 342
AgsI TTSAA 4 cut(s) 731, 799, 830, 839
AjiI CACGTC 1 cut(s) 343
AloI GAACNNNNNNTCC 2 cut(s) 312, 344
AluBI AGCT 8 cut(s) 72, 133, 154, 256, 363, 562, 750, 909
AluI AGCT 8 cut(s) 72, 133, 154, 256, 363, 562, 750, 909
Alw21I GWGCWC 4 cut(s) 156, 365, 390, 564
Alw26I GTCTC 3 cut(s) 414, 532, 812
AlwI GGATC 1 cut(s) 717
Aor13HI TCCGGA 1 cut(s) 357
AoxI GGCC 3 cut(s) 205, 465, 644
ApeKI GCWGC 1 cut(s) 889
AspLEI GCGC 1 cut(s) 889
AspS9I GGNCC 3 cut(s) 139, 165, 644
AsuHPI GGTGA 4 cut(s) 107, 604, 610, 694
AvaII GGWCC 2 cut(s) 139, 165
BalI TGGCCA 1 cut(s) 467
BanII GRGCYC 3 cut(s) 156, 365, 564
BarI GAAGNNNNNNTAC 2 cut(s) 338, 370
BbrPI CACGTG 1 cut(s) 663
BbsI GAAGAC 1 cut(s) 92
Bbv12I GWGCWC 4 cut(s) 156, 365, 390, 564
BbvI GCAGC 1 cut(s) 876
BccI CCATC 2 cut(s) 311, 673
BceAI ACGGC 3 cut(s) 220, 364, 554
BcoDI GTCTC 3 cut(s) 414, 532, 812
BfaI CTAG 4 cut(s) 69, 317, 510, 906
BglII AGATCT 2 cut(s) 89, 110
BisI GCNGC 6 cut(s) 19, 283, 396, 567, 647, 890
BlsI GCNGC 6 cut(s) 20, 284, 397, 568, 648, 891
Bme18I GGWCC 2 cut(s) 139, 165
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 3 cut(s) 139, 165, 644
BmsI GCATC 1 cut(s) 360
BpiI GAAGAC 1 cut(s) 92
BplI GAGNNNNNCTC 4 cut(s) 374, 406, 512, 544
BpuEI CTTGAG 3 cut(s) 119, 362, 384
BsaAI YACGTR 2 cut(s) 445, 663
BsaHI GRCGYC 1 cut(s) 582
BsaI GGTCTC 1 cut(s) 812
BsaWI WCCGGW 1 cut(s) 357
BsaXI ACNNNNNCTCC 4 cut(s) 131, 161, 312, 342
Bsc4I CCNNNNNNNGG 2 cut(s) 192, 220
BseAI TCCGGA 1 cut(s) 357
BseGI GGATG 2 cut(s) 299, 672
BseLI CCNNNNNNNGG 2 cut(s) 192, 220
BseMII CTCAG 2 cut(s) 143, 510
BseRI GAGGAG 2 cut(s) 175, 398
BseXI GCAGC 1 cut(s) 876
Bsh1236I CGCG 1 cut(s) 649
BshFI GGCC 3 cut(s) 207, 467, 646
BsiHKAI GWGCWC 4 cut(s) 156, 365, 390, 564
BsiSI CCGG 1 cut(s) 358
BslI CCNNNNNNNGG 2 cut(s) 192, 220
BsmAI GTCTC 3 cut(s) 414, 532, 812
BsmBI CGTCTC 1 cut(s) 414
BsnI GGCC 3 cut(s) 207, 467, 646
Bso31I GGTCTC 1 cut(s) 812
Bsp1286I GDGCHC 4 cut(s) 156, 365, 390, 564
Bsp13I TCCGGA 1 cut(s) 357
Bsp143I GATC 5 cut(s) 89, 110, 123, 483, 709
BspANI GGCC 3 cut(s) 207, 467, 646
BspCNI CTCAG 2 cut(s) 142, 511
BspEI TCCGGA 1 cut(s) 357
BspFNI CGCG 1 cut(s) 649
BspHI TCATGA 1 cut(s) 721
BspPI GGATC 1 cut(s) 717
BspTNI GGTCTC 1 cut(s) 812
BsrBI CCGCTC 1 cut(s) 21
BssMI GATC 5 cut(s) 89, 110, 123, 483, 709
BssNI GRCGYC 1 cut(s) 582
Bst4CI ACNGT 5 cut(s) 56, 324, 539, 598, 604
Bst6I CTCTTC 3 cut(s) 255, 410, 774
BstACI GRCGYC 1 cut(s) 582
BstAPI GCANNNNNTGC 1 cut(s) 884
BstBAI YACGTR 2 cut(s) 445, 663
BstC8I GCNNGC 2 cut(s) 287, 564
BstDEI CTNAG 4 cut(s) 129, 429, 480, 519
BstF5I GGATG 2 cut(s) 299, 672
BstFNI CGCG 1 cut(s) 649
BstHHI GCGC 1 cut(s) 889
BstKTI GATC 5 cut(s) 92, 113, 126, 486, 712
BstMAI GTCTC 3 cut(s) 414, 532, 812
BstMBI GATC 5 cut(s) 89, 110, 123, 483, 709
BstMWI GCNNNNNNNGC 4 cut(s) 15, 213, 404, 884
BstUI CGCG 1 cut(s) 649
BstV1I GCAGC 1 cut(s) 876
BstV2I GAAGAC 1 cut(s) 92
BstX2I RGATCY 2 cut(s) 89, 110
BstYI RGATCY 2 cut(s) 89, 110
BsuRI GGCC 3 cut(s) 207, 467, 646
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 2 cut(s) 299, 672
BtsI GCAGTG 1 cut(s) 232
BtsIMutI CAGTG 3 cut(s) 232, 544, 846
Cac8I GCNNGC 2 cut(s) 287, 564
CciI TCATGA 1 cut(s) 721
CfoI GCGC 1 cut(s) 889
Cfr13I GGNCC 3 cut(s) 139, 165, 644
Csp6I GTAC 3 cut(s) 346, 442, 507
CviAII CATG 3 cut(s) 105, 162, 722
CviQI GTAC 3 cut(s) 346, 442, 507
DdeI CTNAG 4 cut(s) 129, 429, 480, 519
DpnI GATC 5 cut(s) 91, 112, 125, 485, 711
DpnII GATC 5 cut(s) 89, 110, 123, 483, 709
EaeI YGGCCR 1 cut(s) 465
Eam1104I CTCTTC 3 cut(s) 255, 410, 774
EarI CTCTTC 3 cut(s) 255, 410, 774
EciI GGCGGA 2 cut(s) 5, 269
Ecl136II GAGCTC 3 cut(s) 154, 363, 562
Eco24I GRGCYC 3 cut(s) 156, 365, 564
Eco31I GGTCTC 1 cut(s) 812
Eco47I GGWCC 2 cut(s) 139, 165
Eco53kI GAGCTC 3 cut(s) 154, 363, 562
Eco57I CTGAAG 1 cut(s) 236
Eco72I CACGTG 1 cut(s) 663
EcoICRI GAGCTC 3 cut(s) 154, 363, 562
EcoT38I GRGCYC 3 cut(s) 156, 365, 564
Esp3I CGTCTC 1 cut(s) 414
FaeI CATG 3 cut(s) 108, 165, 725
FaiI YATR 6 cut(s) 106, 163, 410, 470, 674, 723
FalI AAGNNNNNCTT 2 cut(s) 422, 454
FatI CATG 3 cut(s) 104, 161, 721
FauI CCCGC 1 cut(s) 221
FblI GTMKAC 2 cut(s) 201, 339
Fnu4HI GCNGC 6 cut(s) 19, 283, 396, 567, 647, 890
FokI GGATG 2 cut(s) 286, 679
FriOI GRGCYC 3 cut(s) 156, 365, 564
Fsp4HI GCNGC 6 cut(s) 19, 283, 396, 567, 647, 890
FspBI CTAG 4 cut(s) 69, 317, 510, 906
GlaI GCGC 1 cut(s) 888
GluI GCNGC 6 cut(s) 19, 283, 396, 567, 647, 890
HaeIII GGCC 3 cut(s) 207, 467, 646
HapII CCGG 1 cut(s) 358
HhaI GCGC 1 cut(s) 889
Hin1I GRCGYC 1 cut(s) 582
Hin1II CATG 3 cut(s) 108, 165, 725
Hin6I GCGC 1 cut(s) 887
HinP1I GCGC 1 cut(s) 887
HincII GTYRAC 3 cut(s) 202, 340, 544
HindII GTYRAC 3 cut(s) 202, 340, 544
HinfI GANTC 4 cut(s) 179, 425, 521, 718
HpaI GTTAAC 1 cut(s) 544
HpaII CCGG 1 cut(s) 358
HphI GGTGA 4 cut(s) 107, 604, 610, 694
Hpy166II GTNNAC 5 cut(s) 202, 340, 346, 490, 544
Hpy188I TCNGA 3 cut(s) 151, 520, 551
Hpy188III TCNNGA 7 cut(s) 307, 317, 358, 487, 707, 722, 787
Hpy8I GTNNAC 5 cut(s) 202, 340, 346, 490, 544
Hpy99I CGWCG 7 cut(s) 203, 206, 341, 344, 551, 584, 587
HpyAV CCTTC 3 cut(s) 40, 323, 824
HpyCH4III ACNGT 5 cut(s) 56, 324, 539, 598, 604
HpyCH4IV ACGT 5 cut(s) 342, 444, 546, 582, 662
HpyCH4V TGCA 4 cut(s) 108, 229, 632, 846
HpyF10VI GCNNNNNNNGC 4 cut(s) 15, 213, 404, 884
HpyF3I CTNAG 4 cut(s) 129, 429, 480, 519
HpySE526I ACGT 5 cut(s) 342, 444, 546, 582, 662
Hsp92I GRCGYC 1 cut(s) 582
Hsp92II CATG 3 cut(s) 108, 165, 725
HspAI GCGC 1 cut(s) 887
Kpn2I TCCGGA 1 cut(s) 357
KspAI GTTAAC 1 cut(s) 544
Kzo9I GATC 5 cut(s) 89, 110, 123, 483, 709
LmnI GCTCC 4 cut(s) 159, 360, 368, 385
LpnPI CCDG 7 cut(s) 100, 221, 230, 299, 371, 575, 692
Lsp1109I GCAGC 1 cut(s) 876
LweI GCATC 1 cut(s) 360
MaeI CTAG 4 cut(s) 69, 317, 510, 906
MaeII ACGT 5 cut(s) 342, 444, 546, 582, 662
MaeIII GTNAC 3 cut(s) 80, 592, 598
MalI GATC 5 cut(s) 91, 112, 125, 485, 711
MbiI CCGCTC 1 cut(s) 21
MboI GATC 5 cut(s) 89, 110, 123, 483, 709
MboII GAAGA 8 cut(s) 92, 242, 346, 427, 697, 778, 791, 811
MflI RGATCY 2 cut(s) 89, 110
MhlI GDGCHC 4 cut(s) 156, 365, 390, 564
MlsI TGGCCA 1 cut(s) 467
MluCI AATT 3 cut(s) 627, 812, 834
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 2 cut(s) 434, 530
MmeI TCCRAC 2 cut(s) 529, 735
Mox20I TGGCCA 1 cut(s) 467
MroI TCCGGA 1 cut(s) 357
MscI TGGCCA 1 cut(s) 467
MseI TTAA 4 cut(s) 543, 621, 744, 873
MslI CAYNNNNRTG 2 cut(s) 473, 665
Msp20I TGGCCA 1 cut(s) 467
MspI CCGG 1 cut(s) 358
MvnI CGCG 1 cut(s) 649
MwoI GCNNNNNNNGC 4 cut(s) 15, 213, 404, 884
NdeII GATC 5 cut(s) 89, 110, 123, 483, 709
NlaIII CATG 3 cut(s) 108, 165, 725
NmeAIII GCCGAG 1 cut(s) 371
NmuCI GTSAC 3 cut(s) 80, 592, 598
PagI TCATGA 1 cut(s) 721
PfeI GAWTC 2 cut(s) 179, 718
PflFI GACNNNGTC 1 cut(s) 604
PkrI GCNGC 6 cut(s) 20, 284, 397, 568, 648, 891
PleI GAGTC 2 cut(s) 433, 529
PmaCI CACGTG 1 cut(s) 663
PmlI CACGTG 1 cut(s) 663
PpsI GAGTC 2 cut(s) 433, 529
Ppu21I YACGTR 2 cut(s) 445, 663
Psp124BI GAGCTC 3 cut(s) 156, 365, 564
PspCI CACGTG 1 cut(s) 663
PspPI GGNCC 3 cut(s) 139, 165, 644
PsuI RGATCY 2 cut(s) 89, 110
PsyI GACNNNGTC 1 cut(s) 604
RsaI GTAC 3 cut(s) 347, 443, 508
RsaNI GTAC 3 cut(s) 346, 442, 507
RseI CAYNNNNRTG 2 cut(s) 473, 665
SacI GAGCTC 3 cut(s) 156, 365, 564
SalI GTCGAC 2 cut(s) 200, 338
SaqAI TTAA 4 cut(s) 543, 621, 744, 873
SatI GCNGC 6 cut(s) 19, 283, 396, 567, 647, 890
Sau3AI GATC 5 cut(s) 89, 110, 123, 483, 709
Sau96I GGNCC 3 cut(s) 139, 165, 644
SchI GAGTC 2 cut(s) 434, 530
SduI GDGCHC 4 cut(s) 156, 365, 390, 564
SfaNI GCATC 1 cut(s) 360
SgrDI CGTCGACG 2 cut(s) 200, 338
SinI GGWCC 2 cut(s) 139, 165
SmiMI CAYNNNNRTG 2 cut(s) 473, 665
SmlI CTYRAG 3 cut(s) 134, 377, 399
SmoI CTYRAG 3 cut(s) 134, 377, 399
Sse9I AATT 3 cut(s) 627, 812, 834
SspMI CTAG 4 cut(s) 69, 317, 510, 906
SstI GAGCTC 3 cut(s) 156, 365, 564
TaaI ACNGT 5 cut(s) 56, 324, 539, 598, 604
TaiI ACGT 5 cut(s) 345, 447, 549, 585, 665
TaqI TCGA 3 cut(s) 201, 306, 339
TasI AATT 3 cut(s) 627, 812, 834
TatI WGTACW 1 cut(s) 506
TauI GCSGC 5 cut(s) 21, 285, 398, 569, 649
TfiI GAWTC 2 cut(s) 179, 718
Tru1I TTAA 4 cut(s) 543, 621, 744, 873
Tru9I TTAA 4 cut(s) 543, 621, 744, 873
TscAI CASTG 3 cut(s) 239, 544, 853
TseFI GTSAC 3 cut(s) 80, 592, 598
TseI GCWGC 1 cut(s) 889
Tsp45I GTSAC 3 cut(s) 80, 592, 598
TspDTI ATGAA 3 cut(s) 683, 710, 792
TspGWI ACGGA 4 cut(s) 48, 236, 355, 639
TspRI CASTG 3 cut(s) 239, 544, 853
Tth111I GACNNNGTC 1 cut(s) 604
VpaK11BI GGWCC 2 cut(s) 139, 165
XbaI TCTAGA 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XmiI GTMKAC 2 cut(s) 201, 339
XspI CTAG 4 cut(s) 69, 317, 510, 906
ZraI GACGTC 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.