Rmu_sc0001147.1_g000011

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001147.1
Physical Location & Seq
Reverse (-)
73297 .. 74371
1075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001147.1_g000011.1.cds

Sequence Viewer

Length: 705 bp
atgacagggaaagacagtgtgatattacatgggatgtgggcaagcccttactctacgagagtggaactagccctcaaagtgaagggcatatcctatgaatatgtggaagaagatttcaagaacaaaaccccagagctgctcaagtacaacccagttcacaagaagatccctgttcttgttcacaatggaaaacctgttgctgagtctcttgtcatccttgagtatattgaagaagtttggaaagatggtcctcaacttctcccacatgatccccacgaaaaggctcaagttcgattctgggtccattttatcaacacaaagtacactgaaatcatgacgacagtaattataactgagggagaagtacaagagaaagccctcagtcaggtgtatgaactaatgaagttacttgatgaaggaatcaagacctttttcccagatgggaatccaacttttgaggctaagaatttagggctcctagacattgtaggaagttcagtgttttgtgcattttcagctgtagaagaattgattgttgtaaagatcatagacccagagaagactccagtgctattctcttggataacagctctgagagagcaacctatagtgatggagacaattgctcctcctgaaaagctggtgtcacttattcttaggccttggagacagggtttcatcaatcctcatctttctcaatcttaa

Protein Analysis

234

Amino Acids

26.67

Weight (kDa)

5.55

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
AclWI GGATC 2 cut(s) 160, 263
AcsI RAATTY 1 cut(s) 466
AfaI GTAC 3 cut(s) 146, 323, 366
AfiI CCNNNNNNNGG 2 cut(s) 280, 385
AgsI TTSAA 2 cut(s) 118, 230
AluBI AGCT 4 cut(s) 136, 518, 590, 640
AluI AGCT 4 cut(s) 136, 518, 590, 640
Alw26I GTCTC 3 cut(s) 210, 611, 661
AlwI GGATC 2 cut(s) 160, 263
AoxI GGCC 1 cut(s) 659
ApeKI GCWGC 1 cut(s) 136
ApoI RAATTY 1 cut(s) 466
AspS9I GGNCC 2 cut(s) 248, 301
AvaII GGWCC 2 cut(s) 248, 301
BanII GRGCYC 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 566
BbvI GCAGC 1 cut(s) 123
BccI CCATC 3 cut(s) 239, 434, 607
BcoDI GTCTC 3 cut(s) 210, 611, 661
BfaI CTAG 2 cut(s) 68, 479
BfmI CTRYAG 2 cut(s) 519, 606
BisI GCNGC 1 cut(s) 137
BlsI GCNGC 1 cut(s) 138
Bme18I GGWCC 2 cut(s) 248, 301
BmgT120I GGNCC 2 cut(s) 248, 301
BmiI GGNNCC 2 cut(s) 302, 476
BmrI ACTGGG 1 cut(s) 146
BmuI ACTGGG 1 cut(s) 146
BpiI GAAGAC 1 cut(s) 566
BpmI CTGGAG 1 cut(s) 549
BpuEI CTTGAG 3 cut(s) 125, 239, 270
BsaBI GATNNNNATC 1 cut(s) 444
BsaJI CCNNGG 1 cut(s) 662
BsaXI ACNNNNNCTCC 4 cut(s) 610, 640, 658, 688
Bsc4I CCNNNNNNNGG 2 cut(s) 280, 385
Bse1I ACTGG 2 cut(s) 152, 566
Bse8I GATNNNNATC 1 cut(s) 444
BseDI CCNNGG 1 cut(s) 662
BseGI GGATG 2 cut(s) 39, 213
BseJI GATNNNNATC 1 cut(s) 444
BseLI CCNNNNNNNGG 2 cut(s) 280, 385
BseMII CTCAG 4 cut(s) 192, 345, 394, 584
BseNI ACTGG 2 cut(s) 152, 566
BseRI GAGGAG 1 cut(s) 618
BseXI GCAGC 1 cut(s) 123
BshFI GGCC 1 cut(s) 661
BslI CCNNNNNNNGG 2 cut(s) 280, 385
BsmAI GTCTC 3 cut(s) 210, 611, 661
BsnI GGCC 1 cut(s) 661
Bsp1286I GDGCHC 1 cut(s) 477
Bsp143I GATC 3 cut(s) 165, 268, 543
BspANI GGCC 1 cut(s) 661
BspCNI CTCAG 4 cut(s) 193, 346, 393, 585
BspHI TCATGA 1 cut(s) 333
BspLI GGNNCC 2 cut(s) 302, 476
BspPI GGATC 2 cut(s) 160, 263
BsrI ACTGG 2 cut(s) 152, 566
BssECI CCNNGG 1 cut(s) 662
BssMI GATC 3 cut(s) 165, 268, 543
BssT1I CCWWGG 1 cut(s) 662
Bst4CI ACNGT 2 cut(s) 17, 343
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 6 cut(s) 201, 354, 380, 462, 593, 656
BstENI CCTNNNNNAGG 1 cut(s) 383
BstF5I GGATG 2 cut(s) 39, 213
BstKTI GATC 3 cut(s) 168, 271, 546
BstMAI GTCTC 3 cut(s) 210, 611, 661
BstMBI GATC 3 cut(s) 165, 268, 543
BstMWI GCNNNNNNNGC 1 cut(s) 515
BstSFI CTRYAG 2 cut(s) 519, 606
BstV1I GCAGC 1 cut(s) 123
BstV2I GAAGAC 1 cut(s) 566
BstX2I RGATCY 1 cut(s) 165
BstYI RGATCY 1 cut(s) 165
BsuRI GGCC 1 cut(s) 661
BtsCI GGATG 2 cut(s) 39, 213
BtsIMutI CAGTG 4 cut(s) 22, 324, 504, 573
Cac8I GCNNGC 1 cut(s) 43
CciI TCATGA 1 cut(s) 333
Cfr13I GGNCC 2 cut(s) 248, 301
Csp6I GTAC 3 cut(s) 145, 322, 365
CviAII CATG 3 cut(s) 29, 266, 334
CviQI GTAC 3 cut(s) 145, 322, 365
DdeI CTNAG 6 cut(s) 201, 354, 380, 462, 593, 656
DpnI GATC 3 cut(s) 167, 270, 545
DpnII GATC 3 cut(s) 165, 268, 543
Eco130I CCWWGG 1 cut(s) 662
Eco147I AGGCCT 1 cut(s) 661
Eco24I GRGCYC 1 cut(s) 477
Eco47I GGWCC 2 cut(s) 248, 301
EcoNI CCTNNNNNAGG 1 cut(s) 383
EcoT14I CCWWGG 1 cut(s) 662
EcoT38I GRGCYC 1 cut(s) 477
ErhI CCWWGG 1 cut(s) 662
FaeI CATG 3 cut(s) 32, 269, 337
FatI CATG 3 cut(s) 28, 265, 333
Fnu4HI GCNGC 1 cut(s) 137
FokI GGATG 2 cut(s) 46, 200
FriOI GRGCYC 1 cut(s) 477
Fsp4HI GCNGC 1 cut(s) 137
FspBI CTAG 2 cut(s) 68, 479
GluI GCNGC 1 cut(s) 137
GsuI CTGGAG 1 cut(s) 549
HaeIII GGCC 1 cut(s) 661
Hin1II CATG 3 cut(s) 32, 269, 337
HinfI GANTC 5 cut(s) 203, 294, 420, 445, 562
Hpy166II GTNNAC 3 cut(s) 157, 181, 324
Hpy188I TCNGA 1 cut(s) 594
Hpy188III TCNNGA 4 cut(s) 118, 334, 424, 632
Hpy8I GTNNAC 3 cut(s) 157, 181, 324
HpyAV CCTTC 2 cut(s) 76, 410
HpyCH4III ACNGT 2 cut(s) 17, 343
HpyCH4V TGCA 1 cut(s) 509
HpyF10VI GCNNNNNNNGC 1 cut(s) 515
HpyF3I CTNAG 6 cut(s) 201, 354, 380, 462, 593, 656
Hsp92II CATG 3 cut(s) 32, 269, 337
Kzo9I GATC 3 cut(s) 165, 268, 543
LmnI GCTCC 2 cut(s) 480, 631
Lsp1109I GCAGC 1 cut(s) 123
MaeI CTAG 2 cut(s) 68, 479
MaeIII GTNAC 2 cut(s) 405, 645
MalI GATC 3 cut(s) 167, 270, 545
MboI GATC 3 cut(s) 165, 268, 543
MboII GAAGA 6 cut(s) 119, 122, 175, 242, 536, 571
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 1 cut(s) 165
MhlI GDGCHC 1 cut(s) 477
MluCI AATT 4 cut(s) 345, 466, 527, 621
MlyI GAGTC 2 cut(s) 212, 556
MmeI TCCRAC 1 cut(s) 473
MnlI CCTC 7 cut(s) 83, 261, 349, 389, 451, 639, 696
MseI TTAA 1 cut(s) 703
MspA1I CMGCKG 1 cut(s) 518
MunI CAATTG 1 cut(s) 621
MwoI GCNNNNNNNGC 1 cut(s) 515
NdeII GATC 3 cut(s) 165, 268, 543
NlaIII CATG 3 cut(s) 32, 269, 337
NlaIV GGNNCC 2 cut(s) 302, 476
NmuCI GTSAC 1 cut(s) 645
PagI TCATGA 1 cut(s) 333
PceI AGGCCT 1 cut(s) 661
PfeI GAWTC 3 cut(s) 294, 420, 445
PkrI GCNGC 1 cut(s) 138
PleI GAGTC 2 cut(s) 211, 556
PpsI GAGTC 2 cut(s) 211, 556
PsiI TTATAA 1 cut(s) 350
PspN4I GGNNCC 2 cut(s) 302, 476
PspPI GGNCC 2 cut(s) 248, 301
PsuI RGATCY 1 cut(s) 165
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 3 cut(s) 146, 323, 366
RsaNI GTAC 3 cut(s) 145, 322, 365
SaqAI TTAA 1 cut(s) 703
SatI GCNGC 1 cut(s) 137
Sau3AI GATC 3 cut(s) 165, 268, 543
Sau96I GGNCC 2 cut(s) 248, 301
SchI GAGTC 2 cut(s) 212, 556
SduI GDGCHC 1 cut(s) 477
SetI ASST 8 cut(s) 138, 196, 390, 431, 520, 592, 607, 642
SfcI CTRYAG 2 cut(s) 519, 606
SinI GGWCC 2 cut(s) 248, 301
SmlI CTYRAG 3 cut(s) 140, 218, 285
SmoI CTYRAG 3 cut(s) 140, 218, 285
Sse9I AATT 4 cut(s) 345, 466, 527, 621
SseBI AGGCCT 1 cut(s) 661
SspMI CTAG 2 cut(s) 68, 479
StuI AGGCCT 1 cut(s) 661
StyI CCWWGG 1 cut(s) 662
TaaI ACNGT 2 cut(s) 17, 343
TaqI TCGA 1 cut(s) 292
TasI AATT 4 cut(s) 345, 466, 527, 621
TatI WGTACW 3 cut(s) 144, 321, 364
TfiI GAWTC 3 cut(s) 294, 420, 445
Tru1I TTAA 1 cut(s) 703
Tru9I TTAA 1 cut(s) 703
TscAI CASTG 4 cut(s) 22, 331, 504, 573
TseFI GTSAC 1 cut(s) 645
TseI GCWGC 1 cut(s) 136
Tsp45I GTSAC 1 cut(s) 645
TspDTI ATGAA 5 cut(s) 111, 408, 416, 429, 667
TspRI CASTG 4 cut(s) 22, 331, 504, 573
VpaK11BI GGWCC 2 cut(s) 248, 301
XagI CCTNNNNNAGG 1 cut(s) 383
XapI RAATTY 1 cut(s) 466
XspI CTAG 2 cut(s) 68, 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.