Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000433

Physical Location & Seq

Genomic Coordinates Reverse (-)

15715042 .. 15716108

Gene Structure 1067 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G191800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 519 bp

ATGGCAGAGGAAAACAAAGTGACCCTATATGGAATGTGGGCGACTAAATATTTTAATAGCCAAAAATTGGCTCTCAGACTCAAAGGCATACCCTATGAATATGTGCAGGAAGATTTGAGGAACAAAAGCCCATTGCTCCTCAAATTGAATCCTGTTCATCAGAAAGTTCCAGTTCTTGTCCACAATGGAAAACCAATTGTTGAGTCTCTTGTCATCCTTGAATACATCGATGAAACCTGGGAAACTGGCCCTCGACTTGTGTGTGAGAGCATGGTCTCAGTTGTCAAAACCAATGGAGACGCACAAGATAAAACCATGAAACAAGTGACTGAGACAATGAAGTTACTTGAAGAGGGATTGAAGGAGGTGGTCATTTTTTCACATTTTGGCTCATATGAAGCTCAGGAAGAAGCCCTTGGATTGAAGTATATAAACCCTGAGAAGACTCCACTAATTTCTTCCTCCATAACAGCTCTGACTGAGATCCCTGGGGGTGAAAGAGGCGCGCAATCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

173

Amino Acids

19.3

Weight (kDa)

5.49

Isoelectric Point (pI)

32.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62480 AT5G62480 AT5G62480
fragaria_vesca	FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica	MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica	Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis	pycom06g17020
rosa_chinensis	RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata	RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora	Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa	Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha	Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana	Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	67
AccII	CGCG	1 cut(s)	506
AclWI	GGATC	1 cut(s)	478
AfiI	CCNNNNNNNGG	1 cut(s)	67
AgsI	TTSAA	5 cut(s)	148, 221, 350, 361, 424
AjnI	CCWGG	2 cut(s)	236, 487
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
AluBI	AGCT	2 cut(s)	401, 473
AluI	AGCT	2 cut(s)	401, 473
Alw26I	GTCTC	4 cut(s)	210, 280, 291, 326
AlwI	GGATC	1 cut(s)	478
AoxI	GGCC	1 cut(s)	247
AspLEI	GCGC	2 cut(s)	506, 508
AspS9I	GGNCC	1 cut(s)	248
AsuHPI	GGTGA	1 cut(s)	506
BbsI	GAAGAC	1 cut(s)	449
BciT130I	CCWGG	2 cut(s)	238, 489
BcoDI	GTCTC	4 cut(s)	210, 280, 291, 326
Bme1390I	CCNGG	2 cut(s)	238, 489
BmgT120I	GGNCC	1 cut(s)	248
BmrFI	CCNGG	2 cut(s)	238, 489
BpiI	GAAGAC	1 cut(s)	449
Bpu10I	CCTNAGC	1 cut(s)	402
Bsa29I	ATCGAT	1 cut(s)	228
BsaI	GGTCTC	1 cut(s)	280
BsaJI	CCNNGG	4 cut(s)	237, 415, 487, 488
Bsc4I	CCNNNNNNNGG	1 cut(s)	67
Bse1I	ACTGG	2 cut(s)	170, 250
Bse3DI	GCAATG	1 cut(s)	131
BseBI	CCWGG	2 cut(s)	238, 489
BseCI	ATCGAT	1 cut(s)	228
BseDI	CCNNGG	4 cut(s)	237, 415, 487, 488
BseGI	GGATG	1 cut(s)	213
BseLI	CCNNNNNNNGG	1 cut(s)	67
BseMI	GCAATG	1 cut(s)	131
BseMII	CTCAG	6 cut(s)	88, 291, 321, 416, 429, 471
BseNI	ACTGG	2 cut(s)	170, 250
BsePI	GCGCGC	1 cut(s)	504
BseRI	GAGGAG	1 cut(s)	128
BsgI	GTGCAG	1 cut(s)	125
Bsh1236I	CGCG	1 cut(s)	506
BshFI	GGCC	1 cut(s)	249
BshVI	ATCGAT	1 cut(s)	228
BslI	CCNNNNNNNGG	1 cut(s)	67
BsmAI	GTCTC	4 cut(s)	210, 280, 291, 326
BsmBI	CGTCTC	1 cut(s)	291
BsnI	GGCC	1 cut(s)	249
Bso31I	GGTCTC	1 cut(s)	280
Bsp143I	GATC	1 cut(s)	483
BspANI	GGCC	1 cut(s)	249
BspCNI	CTCAG	6 cut(s)	87, 290, 322, 415, 430, 472
BspDI	ATCGAT	1 cut(s)	228
BspFNI	CGCG	1 cut(s)	506
BspHI	TCATGA	1 cut(s)	515
BspPI	GGATC	1 cut(s)	478
BspTNI	GGTCTC	1 cut(s)	280
BsrDI	GCAATG	1 cut(s)	131
BsrI	ACTGG	2 cut(s)	170, 250
BssECI	CCNNGG	4 cut(s)	237, 415, 487, 488
BssHII	GCGCGC	1 cut(s)	504
BssMI	GATC	1 cut(s)	483
BssT1I	CCWWGG	1 cut(s)	415
Bst2UI	CCWGG	2 cut(s)	238, 489
Bst6I	CTCTTC	1 cut(s)	345
BstC8I	GCNNGC	1 cut(s)	506
BstDEI	CTNAG	6 cut(s)	74, 277, 330, 402, 438, 480
BstF5I	GGATG	1 cut(s)	213
BstFNI	CGCG	1 cut(s)	506
BstHHI	GCGC	2 cut(s)	506, 508
BstKTI	GATC	1 cut(s)	486
BstMAI	GTCTC	4 cut(s)	210, 280, 291, 326
BstMBI	GATC	1 cut(s)	483
BstNI	CCWGG	2 cut(s)	238, 489
BstSCI	CCNGG	2 cut(s)	236, 487
BstUI	CGCG	1 cut(s)	506
BstV2I	GAAGAC	1 cut(s)	449
BstX2I	RGATCY	1 cut(s)	483
BstYI	RGATCY	1 cut(s)	483
Bsu15I	ATCGAT	1 cut(s)	228
BsuRI	GGCC	1 cut(s)	249
BsuTUI	ATCGAT	1 cut(s)	228
BtsCI	GGATG	1 cut(s)	213
Cac8I	GCNNGC	1 cut(s)	506
CciI	TCATGA	1 cut(s)	515
CfoI	GCGC	2 cut(s)	506, 508
Cfr13I	GGNCC	1 cut(s)	248
ClaI	ATCGAT	1 cut(s)	228
CseI	GACGC	1 cut(s)	308
CviAII	CATG	3 cut(s)	271, 316, 516
CviJI	RGCY	8 cut(s)	60, 71, 129, 249, 390, 401, 413, 473
CviKI_1	RGCY	8 cut(s)	60, 71, 129, 249, 390, 401, 413, 473
DdeI	CTNAG	6 cut(s)	74, 277, 330, 402, 438, 480
DpnI	GATC	1 cut(s)	485
DpnII	GATC	1 cut(s)	483
Eam1104I	CTCTTC	1 cut(s)	345
EarI	CTCTTC	1 cut(s)	345
Eco130I	CCWWGG	1 cut(s)	415
Eco31I	GGTCTC	1 cut(s)	280
EcoRII	CCWGG	2 cut(s)	236, 487
EcoT14I	CCWWGG	1 cut(s)	415
ErhI	CCWWGG	1 cut(s)	415
Esp3I	CGTCTC	1 cut(s)	291
FaeI	CATG	3 cut(s)	274, 319, 519
FalI	AAGNNNNNCTT	2 cut(s)	399, 431
FatI	CATG	3 cut(s)	270, 315, 515
FauNDI	CATATG	1 cut(s)	394
FokI	GGATG	1 cut(s)	200
GlaI	GCGC	2 cut(s)	505, 507
HaeIII	GGCC	1 cut(s)	249
HgaI	GACGC	1 cut(s)	308
HhaI	GCGC	2 cut(s)	506, 508
Hin1II	CATG	3 cut(s)	274, 319, 519
Hin6I	GCGC	2 cut(s)	504, 506
HinP1I	GCGC	2 cut(s)	504, 506
HinfI	GANTC	4 cut(s)	78, 148, 203, 445
HphI	GGTGA	1 cut(s)	506
Hpy166II	GTNNAC	1 cut(s)	181
Hpy188I	TCNGA	3 cut(s)	77, 162, 477
Hpy188III	TCNNGA	2 cut(s)	404, 516
Hpy8I	GTNNAC	1 cut(s)	181
HpyAV	CCTTC	1 cut(s)	355
HpyCH4V	TGCA	1 cut(s)	106
HpyF3I	CTNAG	6 cut(s)	74, 277, 330, 402, 438, 480
Hsp92II	CATG	3 cut(s)	274, 319, 519
HspAI	GCGC	2 cut(s)	504, 506
Kzo9I	GATC	1 cut(s)	483
LmnI	GCTCC	1 cut(s)	141
MaeIII	GTNAC	3 cut(s)	19, 325, 342
MalI	GATC	1 cut(s)	485
MboI	GATC	1 cut(s)	483
MboII	GAAGA	5 cut(s)	122, 362, 419, 450, 454
MfeI	CAATTG	1 cut(s)	195
MflI	RGATCY	1 cut(s)	483
MluCI	AATT	4 cut(s)	65, 143, 195, 453
MlyI	GAGTC	3 cut(s)	72, 212, 439
MnlI	CCTC	7 cut(s)	111, 149, 261, 346, 358, 472, 494
MseI	TTAA	1 cut(s)	54
MspR9I	CCNGG	2 cut(s)	238, 489
MunI	CAATTG	1 cut(s)	195
MvaI	CCWGG	2 cut(s)	238, 489
MvnI	CGCG	1 cut(s)	506
NdeI	CATATG	1 cut(s)	394
NdeII	GATC	1 cut(s)	483
NlaIII	CATG	3 cut(s)	274, 319, 519
NmuCI	GTSAC	2 cut(s)	19, 325
PagI	TCATGA	1 cut(s)	515
PasI	CCCWGGG	1 cut(s)	488
PauI	GCGCGC	1 cut(s)	504
PfeI	GAWTC	1 cut(s)	148
PflMI	CCANNNNNTGG	1 cut(s)	67
PleI	GAGTC	3 cut(s)	72, 211, 439
PpsI	GAGTC	3 cut(s)	72, 211, 439
Psp6I	CCWGG	2 cut(s)	236, 487
PspGI	CCWGG	2 cut(s)	236, 487
PspPI	GGNCC	1 cut(s)	248
PsuI	RGATCY	1 cut(s)	483
PteI	GCGCGC	1 cut(s)	504
SaqAI	TTAA	1 cut(s)	54
Sau3AI	GATC	1 cut(s)	483
Sau96I	GGNCC	1 cut(s)	248
SchI	GAGTC	3 cut(s)	72, 212, 439
ScrFI	CCNGG	2 cut(s)	238, 489
SetI	ASST	4 cut(s)	239, 369, 403, 475
Sse9I	AATT	4 cut(s)	65, 143, 195, 453
SspI	AATATT	1 cut(s)	50
StyD4I	CCNGG	2 cut(s)	236, 487
StyI	CCWWGG	1 cut(s)	415
TaqI	TCGA	2 cut(s)	228, 253
TasI	AATT	4 cut(s)	65, 143, 195, 453
TfiI	GAWTC	1 cut(s)	148
Tru1I	TTAA	1 cut(s)	54
Tru9I	TTAA	1 cut(s)	54
TseFI	GTSAC	2 cut(s)	19, 325
Tsp45I	GTSAC	2 cut(s)	19, 325
TspDTI	ATGAA	6 cut(s)	111, 146, 246, 332, 353, 411
Van91I	CCANNNNNTGG	1 cut(s)	67

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.