RLG00000005216

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
65930777 .. 65932971
2195 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005216

Sequence Viewer

Length: 1065 bp
ATGGCAGAGCAAAACAAGGTGATCCTATACGGAACGTGGACCAGTCCCTATGTTAAGAGGGTGGAATTGGCCCTCAAGGTAAAGGGTATACGCTATGAATATGTGGATGAAGATTTGAGGAACAAAAGTCCATTGCTTCTCGAGTTTAATCCTATTCATAAGAAGGTTCCTGTGCTTGTCCACAATGGAAAAGCCATTGTTGAGTCTCTTGTGATCATTGAATATATTGATGAAACCTGGAAAACTGGCCCTCAACTTCTACCGGAAGATCCATACAAACGATCCCAAATTCGCTTCTGGGCTAGCTATGTACAGCAGGTGTTTGAGGCCATGCTCTTAGTGATCAAAACCATTGGAGAAGCACAAGAGAAAGCCATCAAAGAAGTGTCTGAGAAGGTAACATTACTTGAATCCGGACTCCAGGGTTTGTTCCCAGATGGCATTCCTTCAGTACATGAGTACAGCAAAAATGTGACATTACTAGATTTGGTAATTCTCGCACACTTTGGCGGATATGAAGCTCAGGAAGAAGTCCTTGGCCTAAAGCTTATTGACTCTGAGAAGACTCCACTGGTCGTTTCCTGCATAACAGCTCTGGTTGAGATCCCTGCGGTGAAAGAATCGAGGAATCCTCATGAAAAGGTGGTGGCCTTCCTCAAGTTCTTTAGAGAAAATGCCCTCAAAAGATCGGGGAACAAAAGTCCAATATTGCTCCTTAAGTTCAATTCTGTTCATGAGAAGGTTCCTGTACTTGTTCATAATGGGAAAACTATTGCTGAGTCTCTTGTGATCATTGAATATATTGATGACATCAGGACTACTGAACCTCAATTTTTACCACAAGATCCATATAAAAGATCCCAAATTCGCTTCTGGGTCAGCTATATGCAGCAGCTCTGCGAAGTTCTTGGCAAAAATGTTATGCAAGAAGTATTTTCCTGCATAACAGCTCTGGCTGAGATACCTTCGGTGAAAGAGGCGTGTCACCCTCATGAAAAGATGGCGTTCCTCATTGTATTTAGAGAGAACGCCCTAAATACAGCTGGACCAGTATTGAGTCGATGA

Protein Analysis

355

Amino Acids

40.25

Weight (kDa)

6.53

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 6 - 78 1.5e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 9 - 79 2.2e-18 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 14 - 79 1.2e-15 Glutathione S-transferase, N-terminal domain
GST_N PF02798 230 - 269 8.6e-08 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 242 - 272 6.3e-06 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 307
Acc36I ACCTGC 1 cut(s) 307
AccI GTMKAC 1 cut(s) 88
AccIII TCCGGA 1 cut(s) 413
AciI CCGC 2 cut(s) 510, 611
AclWI GGATC 6 cut(s) 16, 263, 276, 598, 839, 852
AcsI RAATTY 2 cut(s) 288, 864
AcuI CTGAAG 1 cut(s) 432
AfaI GTAC 4 cut(s) 312, 453, 461, 750
AflII CTTAAG 1 cut(s) 716
AgsI TTSAA 4 cut(s) 221, 410, 724, 797
AjnI CCWGG 2 cut(s) 236, 420
AjuI GAANNNNNNNTTGG 2 cut(s) 519, 551
AluBI AGCT 8 cut(s) 306, 521, 547, 593, 882, 895, 950, 1043
AluI AGCT 8 cut(s) 306, 521, 547, 593, 882, 895, 950, 1043
Alw26I GTCTC 2 cut(s) 210, 786
AlwI GGATC 6 cut(s) 16, 263, 276, 598, 839, 852
Ama87I CYCGRG 1 cut(s) 140
Aor13HI TCCGGA 1 cut(s) 413
AoxI GGCC 5 cut(s) 69, 247, 327, 538, 648
ApeKI GCWGC 2 cut(s) 889, 892
ApoI RAATTY 2 cut(s) 288, 864
AspS9I GGNCC 4 cut(s) 39, 70, 248, 1046
AsuHPI GGTGA 4 cut(s) 31, 625, 977, 982
AsuNHI GCTAGC 1 cut(s) 302
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 2 cut(s) 39, 1046
BbsI GAAGAC 1 cut(s) 569
BbvI GCAGC 2 cut(s) 901, 904
BccI CCATC 3 cut(s) 383, 431, 994
BciT130I CCWGG 2 cut(s) 238, 422
BclI TGATCA 3 cut(s) 213, 342, 789
BcoDI GTCTC 2 cut(s) 210, 786
BfaI CTAG 2 cut(s) 303, 482
BfrI CTTAAG 1 cut(s) 716
BfuAI ACCTGC 1 cut(s) 307
BisI GCNGC 2 cut(s) 890, 893
BlsI GCNGC 2 cut(s) 891, 894
Bme1390I CCNGG 2 cut(s) 238, 422
Bme18I GGWCC 2 cut(s) 39, 1046
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 4 cut(s) 39, 70, 248, 1046
BmiI GGNNCC 2 cut(s) 168, 744
BmrFI CCNGG 2 cut(s) 238, 422
BmtI GCTAGC 1 cut(s) 306
BpiI GAAGAC 1 cut(s) 569
BplI GAGNNNNNCTC 2 cut(s) 616, 648
BpmI CTGGAG 1 cut(s) 404
Bpu10I CCTNAGC 1 cut(s) 522
BpuEI CTTGAG 2 cut(s) 59, 641
BsaJI CCNNGG 2 cut(s) 421, 535
BsaWI WCCGGW 2 cut(s) 262, 413
Bse1I ACTGG 4 cut(s) 42, 250, 576, 1049
Bse3DI GCAATG 1 cut(s) 131
BseAI TCCGGA 1 cut(s) 413
BseBI CCWGG 2 cut(s) 238, 422
BseDI CCNNGG 2 cut(s) 421, 535
BseGI GGATG 1 cut(s) 112
BseMI GCAATG 1 cut(s) 131
BseMII CTCAG 5 cut(s) 381, 536, 549, 768, 948
BseNI ACTGG 4 cut(s) 42, 250, 576, 1049
BseXI GCAGC 2 cut(s) 901, 904
BshFI GGCC 5 cut(s) 71, 249, 329, 540, 650
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 2 cut(s) 263, 414
BslFI GGGAC 1 cut(s) 30
BsmAI GTCTC 2 cut(s) 210, 786
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 441
BsnI GGCC 5 cut(s) 71, 249, 329, 540, 650
BsoBI CYCGRG 1 cut(s) 140
Bsp13I TCCGGA 1 cut(s) 413
Bsp1407I TGTACA 1 cut(s) 310
BspACI CCGC 2 cut(s) 510, 611
BspANI GGCC 5 cut(s) 71, 249, 329, 540, 650
BspCNI CTCAG 5 cut(s) 382, 535, 550, 769, 949
BspEI TCCGGA 1 cut(s) 413
BspHI TCATGA 3 cut(s) 634, 733, 991
BspLI GGNNCC 2 cut(s) 168, 744
BspMI ACCTGC 1 cut(s) 307
BspOI GCTAGC 1 cut(s) 306
BspPI GGATC 6 cut(s) 16, 263, 276, 598, 839, 852
BspTI CTTAAG 1 cut(s) 716
BsrDI GCAATG 1 cut(s) 131
BsrGI TGTACA 1 cut(s) 310
BsrI ACTGG 4 cut(s) 42, 250, 576, 1049
BssECI CCNNGG 2 cut(s) 421, 535
BssNAI GTATAC 1 cut(s) 89
BssT1I CCWWGG 1 cut(s) 535
Bst1107I GTATAC 1 cut(s) 89
Bst2UI CCWGG 2 cut(s) 238, 422
BstAFI CTTAAG 1 cut(s) 716
BstAUI TGTACA 1 cut(s) 310
BstC8I GCNNGC 1 cut(s) 304
BstDEI CTNAG 6 cut(s) 337, 390, 522, 558, 777, 957
BstF5I GGATG 1 cut(s) 112
BstMAI GTCTC 2 cut(s) 210, 786
BstNI CCWGG 2 cut(s) 238, 422
BstSCI CCNGG 2 cut(s) 236, 420
BstV1I GCAGC 2 cut(s) 901, 904
BstV2I GAAGAC 1 cut(s) 569
BstX2I RGATCY 4 cut(s) 268, 603, 844, 857
BstYI RGATCY 4 cut(s) 268, 603, 844, 857
BstZ17I GTATAC 1 cut(s) 89
BsuRI GGCC 5 cut(s) 71, 249, 329, 540, 650
BtsCI GGATG 1 cut(s) 112
BtsIMutI CAGTG 1 cut(s) 569
BveI ACCTGC 1 cut(s) 307
Cac8I GCNNGC 1 cut(s) 304
CciI TCATGA 3 cut(s) 634, 733, 991
Cfr13I GGNCC 4 cut(s) 39, 70, 248, 1046
Csp6I GTAC 4 cut(s) 311, 452, 460, 749
CviAII CATG 5 cut(s) 331, 455, 635, 734, 992
CviQI GTAC 4 cut(s) 311, 452, 460, 749
DdeI CTNAG 6 cut(s) 337, 390, 522, 558, 777, 957
EciI GGCGGA 1 cut(s) 525
Eco130I CCWWGG 1 cut(s) 535
Eco47I GGWCC 2 cut(s) 39, 1046
Eco57I CTGAAG 1 cut(s) 432
Eco88I CYCGRG 1 cut(s) 140
EcoRII CCWGG 2 cut(s) 236, 420
EcoT14I CCWWGG 1 cut(s) 535
ErhI CCWWGG 1 cut(s) 535
FaeI CATG 5 cut(s) 334, 458, 638, 737, 995
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FaqI GGGAC 1 cut(s) 30
FatI CATG 5 cut(s) 330, 454, 634, 733, 991
FbaI TGATCA 3 cut(s) 213, 342, 789
FblI GTMKAC 1 cut(s) 88
Fnu4HI GCNGC 2 cut(s) 890, 893
FokI GGATG 1 cut(s) 119
Fsp4HI GCNGC 2 cut(s) 890, 893
FspBI CTAG 2 cut(s) 303, 482
GluI GCNGC 2 cut(s) 890, 893
GsuI CTGGAG 1 cut(s) 404
HaeIII GGCC 5 cut(s) 71, 249, 329, 540, 650
HapII CCGG 2 cut(s) 263, 414
Hin1II CATG 5 cut(s) 334, 458, 638, 737, 995
HindIII AAGCTT 1 cut(s) 545
HinfI GANTC 9 cut(s) 203, 410, 417, 554, 565, 620, 628, 779, 1057
HpaII CCGG 2 cut(s) 263, 414
HphI GGTGA 4 cut(s) 31, 625, 977, 982
Hpy166II GTNNAC 3 cut(s) 39, 89, 181
Hpy188I TCNGA 2 cut(s) 391, 559
Hpy188III TCNNGA 7 cut(s) 140, 414, 524, 635, 734, 814, 992
Hpy8I GTNNAC 3 cut(s) 39, 89, 181
HpyAV CCTTC 6 cut(s) 157, 388, 456, 661, 733, 975
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 4 cut(s) 585, 889, 925, 942
HpyF3I CTNAG 6 cut(s) 337, 390, 522, 558, 777, 957
HpySE526I ACGT 1 cut(s) 35
Hsp92II CATG 5 cut(s) 334, 458, 638, 737, 995
Kpn2I TCCGGA 1 cut(s) 413
Ksp22I TGATCA 3 cut(s) 213, 342, 789
LmnI GCTCC 1 cut(s) 717
Lsp1109I GCAGC 2 cut(s) 901, 904
MaeI CTAG 2 cut(s) 303, 482
MaeII ACGT 1 cut(s) 35
MaeIII GTNAC 3 cut(s) 397, 472, 983
MboII GAAGA 4 cut(s) 122, 278, 539, 574
MflI RGATCY 4 cut(s) 268, 603, 844, 857
MluCI AATT 6 cut(s) 65, 288, 492, 724, 830, 864
MlyI GAGTC 5 cut(s) 212, 411, 548, 559, 788
MroI TCCGGA 1 cut(s) 413
MseI TTAA 3 cut(s) 54, 147, 717
MslI CAYNNNNRTG 1 cut(s) 990
MspA1I CMGCKG 1 cut(s) 1043
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 2 cut(s) 263, 414
MspR9I CCNGG 2 cut(s) 238, 422
Mva1269I GAATGC 1 cut(s) 441
MvaI CCWGG 2 cut(s) 238, 422
NheI GCTAGC 1 cut(s) 302
NlaIII CATG 5 cut(s) 334, 458, 638, 737, 995
NlaIV GGNNCC 2 cut(s) 168, 744
NmuCI GTSAC 2 cut(s) 472, 983
PaeR7I CTCGAG 1 cut(s) 140
PagI TCATGA 3 cut(s) 634, 733, 991
PaqCI CACCTGC 1 cut(s) 307
PctI GAATGC 1 cut(s) 441
PfeI GAWTC 3 cut(s) 410, 620, 628
PkrI GCNGC 2 cut(s) 891, 894
PleI GAGTC 5 cut(s) 211, 411, 548, 559, 787
PpsI GAGTC 5 cut(s) 211, 411, 548, 559, 787
Psp6I CCWGG 2 cut(s) 236, 420
PspGI CCWGG 2 cut(s) 236, 420
PspN4I GGNNCC 2 cut(s) 168, 744
PspPI GGNCC 4 cut(s) 39, 70, 248, 1046
PsuI RGATCY 4 cut(s) 268, 603, 844, 857
PvuII CAGCTG 1 cut(s) 1043
RsaI GTAC 4 cut(s) 312, 453, 461, 750
RsaNI GTAC 4 cut(s) 311, 452, 460, 749
RseI CAYNNNNRTG 1 cut(s) 990
SaqAI TTAA 3 cut(s) 54, 147, 717
SatI GCNGC 2 cut(s) 890, 893
Sau96I GGNCC 4 cut(s) 39, 70, 248, 1046
SchI GAGTC 5 cut(s) 212, 411, 548, 559, 788
ScrFI CCNGG 2 cut(s) 238, 422
Sfr274I CTCGAG 1 cut(s) 140
SinI GGWCC 2 cut(s) 39, 1046
SlaI CTCGAG 1 cut(s) 140
SmiMI CAYNNNNRTG 1 cut(s) 990
SmlI CTYRAG 4 cut(s) 74, 140, 656, 716
SmoI CTYRAG 4 cut(s) 74, 140, 656, 716
Sse9I AATT 6 cut(s) 65, 288, 492, 724, 830, 864
SsiI CCGC 2 cut(s) 510, 611
SspI AATATT 1 cut(s) 708
SspMI CTAG 2 cut(s) 303, 482
StyD4I CCNGG 2 cut(s) 236, 420
StyI CCWWGG 1 cut(s) 535
TaiI ACGT 1 cut(s) 38
TaqI TCGA 3 cut(s) 141, 623, 1060
TasI AATT 6 cut(s) 65, 288, 492, 724, 830, 864
TatI WGTACW 4 cut(s) 310, 451, 459, 748
TfiI GAWTC 3 cut(s) 410, 620, 628
Tru1I TTAA 3 cut(s) 54, 147, 717
Tru9I TTAA 3 cut(s) 54, 147, 717
TscAI CASTG 1 cut(s) 576
TseFI GTSAC 2 cut(s) 472, 983
TseI GCWGC 2 cut(s) 889, 892
Tsp45I GTSAC 2 cut(s) 472, 983
TspDTI ATGAA 9 cut(s) 111, 123, 146, 246, 531, 651, 722, 746, 1008
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 1 cut(s) 576
Vha464I CTTAAG 1 cut(s) 716
VpaK11BI GGWCC 2 cut(s) 39, 1046
XapI RAATTY 2 cut(s) 288, 864
XhoI CTCGAG 1 cut(s) 140
XmiI GTMKAC 1 cut(s) 88
XspI CTAG 2 cut(s) 303, 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.