Rh7CG041600

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
2759029 .. 2762394
3366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG041600.1

Sequence Viewer

Length: 852 bp
ATGTTATTAGTGGTCAAAACCATTGGAGAAGCACAACAGAAAGCCATCAAAGAAGTGTCTGAGAAGGTAAAATTACTTGAAACCGGACTCAAGGGTTTGTTCCCGGATGGCATTCCTTCAGTAGATGAGTACAGCAAAAATGTGACACTGCTAGATTTGGTCATTTTCGCACACTTCGGGGGATATGAAGCTCAGGAAGAAGTCCTTGGCCTAAAGTTTGTCGACTCCGAGAAGACTCCGCTGGTAGTTTCCTGCATAACAGCTCTGATTGAGATCCCTGCGTTGAAAGAGTCGCGGATTCCTCATGAAAAGACGGTGGCCTTCCTCAAGTTCCTTAGGGAAAATGCCCTCAAGTGTTTGAGGCATGGTCTTAGTGATCAAAACCATTGGAGAAGCACAAGAGAAAGCGATCAAAGAAGTTCTGAGAAGGTAACATTACTTGAATCCGGACTTCAGGGTTTGTTCCCAGATGGCATTCCTTCAGTAGAGTACAGCAAAAATGTGACATTACTAGATTTGGTAATTCTCGCACACTTTGGCGGATATGAAGCTCAGGAAGAAGTCCTTGGCCTAAAGCTTATTGACTCTGAGAAGACTCCACTGGTAGTTTCCTGCATAACAGCTCTGGTTGAGATCCCTGCAGTGAAAGAATCGAGGAATCCTCATGAAAAGGTGGTGGCCTTCCTCAAGTTCTTCCTCAAGGTGGTGGCCTTCATGAACTTCTTTATCCTGCCTGCCCTATCACAAATTCCTAATTCCGCCAGTAACTCCCTTCACATTTCATCATTGTACACCGATTTAGATGTACTCAAACAAAGTAAAGAACTTGTTCTTAATGTGTTGCGTGTTTGA

Protein Analysis

283

Amino Acids

31.44

Weight (kDa)

5.86

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 222
AccII CGCG 1 cut(s) 295
AccIII TCCGGA 1 cut(s) 446
AciI CCGC 4 cut(s) 239, 295, 540, 759
AclWI GGATC 2 cut(s) 268, 628
AcsI RAATTY 1 cut(s) 747
AcuI CTGAAG 3 cut(s) 102, 437, 465
AfaI GTAC 4 cut(s) 131, 491, 791, 807
AfiI CCNNNNNNNGG 1 cut(s) 703
AgsI TTSAA 3 cut(s) 80, 286, 443
AjuI GAANNNNNNNTTGG 4 cut(s) 189, 221, 549, 581
AluBI AGCT 5 cut(s) 191, 263, 551, 577, 623
AluI AGCT 5 cut(s) 191, 263, 551, 577, 623
AlwI GGATC 2 cut(s) 268, 628
Aor13HI TCCGGA 1 cut(s) 446
AoxI GGCC 5 cut(s) 208, 318, 568, 678, 708
ApoI RAATTY 1 cut(s) 747
Asp700I GAANNNNTTC 1 cut(s) 828
AsuC2I CCSGG 1 cut(s) 104
AxyI CCTNAGG 1 cut(s) 335
BbsI GAAGAC 2 cut(s) 239, 599
BccI CCATC 3 cut(s) 53, 101, 464
BclI TGATCA 1 cut(s) 376
BcnI CCSGG 1 cut(s) 104
BfaI CTAG 2 cut(s) 152, 512
BfmI CTRYAG 1 cut(s) 639
Bme1390I CCNGG 1 cut(s) 104
BmrFI CCNGG 1 cut(s) 104
BpiI GAAGAC 2 cut(s) 239, 599
BplI GAGNNNNNCTC 2 cut(s) 646, 678
Bpu10I CCTNAGC 2 cut(s) 192, 552
BpuEI CTTGAG 5 cut(s) 74, 311, 335, 671, 683
BpuMI CCSGG 1 cut(s) 104
BsaBI GATNNNNATC 1 cut(s) 272
BsaJI CCNNGG 2 cut(s) 205, 565
BsaWI WCCGGW 2 cut(s) 83, 446
Bsc4I CCNNNNNNNGG 1 cut(s) 703
Bse1I ACTGG 2 cut(s) 606, 762
Bse21I CCTNAGG 1 cut(s) 335
Bse8I GATNNNNATC 1 cut(s) 272
BseAI TCCGGA 1 cut(s) 446
BseDI CCNNGG 2 cut(s) 205, 565
BseGI GGATG 1 cut(s) 112
BseJI GATNNNNATC 1 cut(s) 272
BseLI CCNNNNNNNGG 1 cut(s) 703
BseMII CTCAG 5 cut(s) 51, 206, 414, 566, 579
BseNI ACTGG 2 cut(s) 606, 762
Bsh1236I CGCG 1 cut(s) 295
BshFI GGCC 5 cut(s) 210, 320, 570, 680, 710
BsiSI CCGG 3 cut(s) 84, 104, 447
BslI CCNNNNNNNGG 1 cut(s) 703
BsmI GAATGC 2 cut(s) 111, 474
BsnI GGCC 5 cut(s) 210, 320, 570, 680, 710
Bsp13I TCCGGA 1 cut(s) 446
Bsp1407I TGTACA 1 cut(s) 789
Bsp143I GATC 4 cut(s) 273, 376, 409, 633
BspACI CCGC 4 cut(s) 239, 295, 540, 759
BspANI GGCC 5 cut(s) 210, 320, 570, 680, 710
BspCNI CTCAG 5 cut(s) 52, 205, 415, 565, 580
BspEI TCCGGA 1 cut(s) 446
BspFNI CGCG 1 cut(s) 295
BspHI TCATGA 3 cut(s) 304, 664, 714
BspMAI CTGCAG 1 cut(s) 643
BspPI GGATC 2 cut(s) 268, 628
BsrGI TGTACA 1 cut(s) 789
BsrI ACTGG 2 cut(s) 606, 762
BssECI CCNNGG 2 cut(s) 205, 565
BssMI GATC 4 cut(s) 273, 376, 409, 633
BssT1I CCWWGG 2 cut(s) 205, 565
Bst4CI ACNGT 1 cut(s) 316
BstAUI TGTACA 1 cut(s) 789
BstC8I GCNNGC 1 cut(s) 735
BstDEI CTNAG 7 cut(s) 60, 192, 335, 371, 423, 552, 588
BstF5I GGATG 1 cut(s) 112
BstFNI CGCG 1 cut(s) 295
BstKTI GATC 4 cut(s) 276, 379, 412, 636
BstMBI GATC 4 cut(s) 273, 376, 409, 633
BstSCI CCNGG 1 cut(s) 102
BstSFI CTRYAG 1 cut(s) 639
BstUI CGCG 1 cut(s) 295
BstV2I GAAGAC 2 cut(s) 239, 599
BstX2I RGATCY 2 cut(s) 273, 633
BstYI RGATCY 2 cut(s) 273, 633
Bsu36I CCTNAGG 1 cut(s) 335
BsuRI GGCC 5 cut(s) 210, 320, 570, 680, 710
BtsCI GGATG 1 cut(s) 112
BtsI GCAGTG 2 cut(s) 146, 648
BtsIMutI CAGTG 3 cut(s) 146, 599, 648
Cac8I GCNNGC 1 cut(s) 735
CciI TCATGA 3 cut(s) 304, 664, 714
Csp6I GTAC 4 cut(s) 130, 490, 790, 806
CviAII CATG 4 cut(s) 305, 365, 665, 715
CviQI GTAC 4 cut(s) 130, 490, 790, 806
DdeI CTNAG 7 cut(s) 60, 192, 335, 371, 423, 552, 588
DpnI GATC 4 cut(s) 275, 378, 411, 635
DpnII GATC 4 cut(s) 273, 376, 409, 633
EciI GGCGGA 2 cut(s) 555, 748
Eco130I CCWWGG 2 cut(s) 205, 565
Eco57I CTGAAG 3 cut(s) 102, 437, 465
Eco81I CCTNAGG 1 cut(s) 335
EcoT14I CCWWGG 2 cut(s) 205, 565
ErhI CCWWGG 2 cut(s) 205, 565
FaeI CATG 4 cut(s) 308, 368, 668, 718
FaiI YATR 8 cut(s) 186, 257, 306, 366, 546, 617, 666, 716
FalI AAGNNNNNCTT 4 cut(s) 189, 221, 549, 581
FatI CATG 4 cut(s) 304, 364, 664, 714
FbaI TGATCA 1 cut(s) 376
FblI GTMKAC 1 cut(s) 222
FokI GGATG 1 cut(s) 119
FspBI CTAG 2 cut(s) 152, 512
HaeIII GGCC 5 cut(s) 210, 320, 570, 680, 710
HapII CCGG 3 cut(s) 84, 104, 447
Hin1II CATG 4 cut(s) 308, 368, 668, 718
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 575
HpaII CCGG 3 cut(s) 84, 104, 447
Hpy166II GTNNAC 2 cut(s) 223, 792
Hpy188I TCNGA 5 cut(s) 61, 229, 267, 424, 589
Hpy188III TCNNGA 6 cut(s) 194, 305, 447, 554, 665, 715
Hpy8I GTNNAC 2 cut(s) 223, 792
HpyAV CCTTC 8 cut(s) 58, 126, 331, 421, 489, 691, 721, 782
HpyCH4III ACNGT 1 cut(s) 316
HpyCH4V TGCA 3 cut(s) 255, 615, 641
HpyF3I CTNAG 7 cut(s) 60, 192, 335, 371, 423, 552, 588
Hsp92II CATG 4 cut(s) 308, 368, 668, 718
Kpn2I TCCGGA 1 cut(s) 446
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 4 cut(s) 273, 376, 409, 633
MaeI CTAG 2 cut(s) 152, 512
MaeIII GTNAC 4 cut(s) 142, 430, 502, 764
MalI GATC 4 cut(s) 275, 378, 411, 635
MboI GATC 4 cut(s) 273, 376, 409, 633
MboII GAAGA 5 cut(s) 209, 244, 569, 604, 685
MflI RGATCY 2 cut(s) 273, 633
MluCI AATT 4 cut(s) 71, 522, 747, 754
MlyI GAGTC 6 cut(s) 81, 218, 229, 299, 578, 589
MnlI CCTC 8 cut(s) 312, 335, 354, 359, 648, 672, 695, 707
MroI TCCGGA 1 cut(s) 446
MroXI GAANNNNTTC 1 cut(s) 828
MseI TTAA 1 cut(s) 834
MspA1I CMGCKG 1 cut(s) 241
MspI CCGG 3 cut(s) 84, 104, 447
MspR9I CCNGG 1 cut(s) 104
Mva1269I GAATGC 2 cut(s) 111, 474
MvnI CGCG 1 cut(s) 295
NciI CCSGG 1 cut(s) 104
NdeII GATC 4 cut(s) 273, 376, 409, 633
NlaIII CATG 4 cut(s) 308, 368, 668, 718
NmuCI GTSAC 2 cut(s) 142, 502
PagI TCATGA 3 cut(s) 304, 664, 714
PctI GAATGC 2 cut(s) 111, 474
PdmI GAANNNNTTC 1 cut(s) 828
PfeI GAWTC 4 cut(s) 298, 443, 650, 658
PfoI TCCNGGA 1 cut(s) 102
PleI GAGTC 6 cut(s) 81, 218, 229, 298, 578, 589
PpsI GAGTC 6 cut(s) 81, 218, 229, 298, 578, 589
PstI CTGCAG 1 cut(s) 643
PsuI RGATCY 2 cut(s) 273, 633
RsaI GTAC 4 cut(s) 131, 491, 791, 807
RsaNI GTAC 4 cut(s) 130, 490, 790, 806
SalI GTCGAC 1 cut(s) 221
SaqAI TTAA 1 cut(s) 834
Sau3AI GATC 4 cut(s) 273, 376, 409, 633
SchI GAGTC 6 cut(s) 81, 218, 229, 299, 578, 589
ScrFI CCNGG 1 cut(s) 104
SetI ASST 9 cut(s) 69, 193, 265, 432, 553, 579, 625, 675, 705
SfcI CTRYAG 1 cut(s) 639
SmlI CTYRAG 5 cut(s) 89, 326, 350, 686, 698
SmoI CTYRAG 5 cut(s) 89, 326, 350, 686, 698
Sse9I AATT 4 cut(s) 71, 522, 747, 754
SsiI CCGC 4 cut(s) 239, 295, 540, 759
SspMI CTAG 2 cut(s) 152, 512
StyD4I CCNGG 1 cut(s) 102
StyI CCWWGG 2 cut(s) 205, 565
TaaI ACNGT 1 cut(s) 316
TaqI TCGA 2 cut(s) 222, 653
TasI AATT 4 cut(s) 71, 522, 747, 754
TatI WGTACW 4 cut(s) 129, 489, 789, 805
TfiI GAWTC 4 cut(s) 298, 443, 650, 658
Tru1I TTAA 1 cut(s) 834
Tru9I TTAA 1 cut(s) 834
TscAI CASTG 3 cut(s) 153, 606, 648
TseFI GTSAC 2 cut(s) 142, 502
Tsp45I GTSAC 2 cut(s) 142, 502
TspDTI ATGAA 7 cut(s) 201, 321, 561, 681, 703, 731, 771
TspRI CASTG 3 cut(s) 153, 606, 648
XapI RAATTY 1 cut(s) 747
XmiI GTMKAC 1 cut(s) 222
XmnI GAANNNNTTC 1 cut(s) 828
XspI CTAG 2 cut(s) 152, 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.