FvH4_5g15120

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
8544422 .. 8545849
1428 bp
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UTR
Exon/CDS
Intron
FvH4_5g15120.t1

Sequence Viewer

Length: 702 bp
ATGGCAGAGCAGAACAAGGTGATCCTATACGGAACCTGGTTTAGTCCCTACGCTAAGATGGTGGAAGTCGCCCTCAAAGCGAAGGGTGTACCCTATGAATATGTGGAAGAAGATTTGTGGAACAAAAGTCCAATGCTCCTCAAGTTGAATCCTATTCATAAGAAGGTTCCTGTGCTTGTCCACAACGGGAAAGCCATTGTTGAATCTCTTGTGATCATTGAATATATGGATGAAACCTGGAAAACTGGCCCTCAACTTCTCCCAGAAGATCCGTACAAACGATCCCAATTTCGTTTCTGGGCTAGCTATATGCACCAGGTGTTTGAGGCGTTGACAGAAGTGGTTACAACTAGTGGAGAAGCACAAGAGAAAGCCATCAAGGAAACGTTTGAGCAATTAAACTTACTTGAAGAGGGACTAAAGGGTTTGTTCCCAGAAGGCATTGTCTCATCAGATGGTGAATTTAGCAATGGGAAACTACTAGAGTTGGTCATGTTCTCATGCTTTGGCACATATGAAGAAGGTCTGCAAGAAGTTTTTGGCATAGATGTTATAGACCCTGAGAAGACTCCACTGTTATTTTCCTGCATAACAGCTCTGATGGAGATACCTGCACTGAAAGAGTCGTGTAATCCTCATGAAAAGATGGTGGCCTTCCTCAAGTTCTATAGAGAAGATGCCCTCAAGTCTGCTACAGCTTGA

Protein Analysis

234

Amino Acids

26.49

Weight (kDa)

4.9

Isoelectric Point (pI)

51.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 6 - 78 9.5e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 9 - 79 8.5e-17 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 14 - 79 3.4e-16 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 619
AclI AACGTT 1 cut(s) 386
AclWI GGATC 3 cut(s) 16, 263, 276
AcsI RAATTY 1 cut(s) 461
AdeI CACNNNGTG 1 cut(s) 319
AfaI GTAC 2 cut(s) 90, 275
AgsI TTSAA 4 cut(s) 148, 203, 221, 410
AhlI ACTAGT 1 cut(s) 350
AjnI CCWGG 3 cut(s) 35, 236, 315
AluBI AGCT 3 cut(s) 306, 596, 698
AluI AGCT 3 cut(s) 306, 596, 698
Alw26I GTCTC 1 cut(s) 451
AlwI GGATC 3 cut(s) 16, 263, 276
AoxI GGCC 2 cut(s) 247, 651
ApoI RAATTY 1 cut(s) 461
AspS9I GGNCC 1 cut(s) 248
AsuHPI GGTGA 2 cut(s) 31, 470
AsuNHI GCTAGC 1 cut(s) 302
BbsI GAAGAC 1 cut(s) 572
BccI CCATC 5 cut(s) 52, 383, 449, 595, 640
BciT130I CCWGG 3 cut(s) 37, 238, 317
BclI TGATCA 1 cut(s) 213
BcoDI GTCTC 1 cut(s) 451
BcuI ACTAGT 1 cut(s) 350
BfaI CTAG 3 cut(s) 303, 351, 482
BfmI CTRYAG 2 cut(s) 667, 693
BfuAI ACCTGC 1 cut(s) 619
Bme1390I CCNGG 3 cut(s) 37, 238, 317
BmgT120I GGNCC 1 cut(s) 248
BmiI GGNNCC 2 cut(s) 34, 168
BmrFI CCNGG 3 cut(s) 37, 238, 317
BmsI GCATC 1 cut(s) 667
BmtI GCTAGC 1 cut(s) 306
BpiI GAAGAC 1 cut(s) 572
BpuEI CTTGAG 3 cut(s) 125, 644, 668
Bse1I ACTGG 1 cut(s) 250
Bse3DI GCAATG 1 cut(s) 475
BseBI CCWGG 3 cut(s) 37, 238, 317
BseGI GGATG 1 cut(s) 235
BseMI GCAATG 1 cut(s) 475
BseMII CTCAG 1 cut(s) 552
BseNI ACTGG 1 cut(s) 250
BseRI GAGGAG 1 cut(s) 128
BsgI GTGCAG 1 cut(s) 597
BshFI GGCC 2 cut(s) 249, 653
BslFI GGGAC 2 cut(s) 30, 429
BsmAI GTCTC 1 cut(s) 451
BsmFI GGGAC 2 cut(s) 30, 429
BsnI GGCC 2 cut(s) 249, 653
Bsp143I GATC 4 cut(s) 21, 213, 268, 281
BspANI GGCC 2 cut(s) 249, 653
BspCNI CTCAG 1 cut(s) 553
BspHI TCATGA 1 cut(s) 637
BspLI GGNNCC 2 cut(s) 34, 168
BspMI ACCTGC 1 cut(s) 619
BspOI GCTAGC 1 cut(s) 306
BspPI GGATC 3 cut(s) 16, 263, 276
BsrDI GCAATG 1 cut(s) 475
BsrI ACTGG 1 cut(s) 250
BssMI GATC 4 cut(s) 21, 213, 268, 281
Bst2UI CCWGG 3 cut(s) 37, 238, 317
Bst4CI ACNGT 1 cut(s) 576
Bst6I CTCTTC 1 cut(s) 405
BstC8I GCNNGC 1 cut(s) 304
BstDEI CTNAG 2 cut(s) 54, 561
BstF5I GGATG 1 cut(s) 235
BstKTI GATC 4 cut(s) 24, 216, 271, 284
BstMAI GTCTC 1 cut(s) 451
BstMBI GATC 4 cut(s) 21, 213, 268, 281
BstMWI GCNNNNNNNGC 1 cut(s) 77
BstNI CCWGG 3 cut(s) 37, 238, 317
BstSCI CCNGG 3 cut(s) 35, 236, 315
BstSFI CTRYAG 2 cut(s) 667, 693
BstV2I GAAGAC 1 cut(s) 572
BstX2I RGATCY 1 cut(s) 268
BstYI RGATCY 1 cut(s) 268
BsuRI GGCC 2 cut(s) 249, 653
BtsCI GGATG 1 cut(s) 235
BtsIMutI CAGTG 2 cut(s) 572, 614
BveI ACCTGC 1 cut(s) 619
Cac8I GCNNGC 1 cut(s) 304
CciI TCATGA 1 cut(s) 637
Cfr13I GGNCC 1 cut(s) 248
CsiI ACCWGGT 2 cut(s) 35, 315
Csp6I GTAC 2 cut(s) 89, 274
CviAII CATG 3 cut(s) 493, 501, 638
CviJI RGCY 8 cut(s) 194, 249, 302, 306, 374, 596, 653, 698
CviKI_1 RGCY 8 cut(s) 194, 249, 302, 306, 374, 596, 653, 698
CviQI GTAC 2 cut(s) 89, 274
DdeI CTNAG 2 cut(s) 54, 561
DpnI GATC 4 cut(s) 23, 215, 270, 283
DpnII GATC 4 cut(s) 21, 213, 268, 281
DraIII CACNNNGTG 1 cut(s) 319
Eam1104I CTCTTC 1 cut(s) 405
EarI CTCTTC 1 cut(s) 405
EcoRII CCWGG 3 cut(s) 35, 236, 315
FaeI CATG 3 cut(s) 496, 504, 641
FaqI GGGAC 2 cut(s) 30, 429
FatI CATG 3 cut(s) 492, 500, 637
FauNDI CATATG 1 cut(s) 514
FbaI TGATCA 1 cut(s) 213
FokI GGATG 1 cut(s) 242
FspBI CTAG 3 cut(s) 303, 351, 482
HaeIII GGCC 2 cut(s) 249, 653
Hin1II CATG 3 cut(s) 496, 504, 641
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HinfI GANTC 4 cut(s) 148, 203, 568, 623
HphI GGTGA 2 cut(s) 31, 470
Hpy166II GTNNAC 3 cut(s) 89, 181, 333
Hpy188I TCNGA 2 cut(s) 454, 600
Hpy188III TCNNGA 1 cut(s) 638
Hpy8I GTNNAC 3 cut(s) 89, 181, 333
HpyAV CCTTC 5 cut(s) 76, 157, 431, 515, 664
HpyCH4III ACNGT 1 cut(s) 576
HpyCH4IV ACGT 1 cut(s) 386
HpyCH4V TGCA 4 cut(s) 313, 529, 588, 614
HpyF10VI GCNNNNNNNGC 1 cut(s) 77
HpyF3I CTNAG 2 cut(s) 54, 561
HpySE526I ACGT 1 cut(s) 386
Hsp92II CATG 3 cut(s) 496, 504, 641
Ksp22I TGATCA 1 cut(s) 213
Kzo9I GATC 4 cut(s) 21, 213, 268, 281
LmnI GCTCC 1 cut(s) 141
LweI GCATC 1 cut(s) 667
MabI ACCWGGT 2 cut(s) 35, 315
MaeI CTAG 3 cut(s) 303, 351, 482
MaeII ACGT 1 cut(s) 386
MaeIII GTNAC 1 cut(s) 343
MalI GATC 4 cut(s) 23, 215, 270, 283
MboI GATC 4 cut(s) 21, 213, 268, 281
MboII GAAGA 7 cut(s) 119, 122, 278, 422, 530, 577, 686
MflI RGATCY 1 cut(s) 268
MluCI AATT 3 cut(s) 287, 395, 461
MlyI GAGTC 2 cut(s) 562, 632
MnlI CCTC 8 cut(s) 83, 149, 261, 319, 406, 645, 668, 692
MseI TTAA 1 cut(s) 398
MspR9I CCNGG 3 cut(s) 37, 238, 317
MvaI CCWGG 3 cut(s) 37, 238, 317
MwoI GCNNNNNNNGC 1 cut(s) 77
NdeI CATATG 1 cut(s) 514
NdeII GATC 4 cut(s) 21, 213, 268, 281
NheI GCTAGC 1 cut(s) 302
NlaIII CATG 3 cut(s) 496, 504, 641
NlaIV GGNNCC 2 cut(s) 34, 168
PagI TCATGA 1 cut(s) 637
PfeI GAWTC 2 cut(s) 148, 203
PleI GAGTC 2 cut(s) 562, 631
PpsI GAGTC 2 cut(s) 562, 631
Psp1406I AACGTT 1 cut(s) 386
Psp6I CCWGG 3 cut(s) 35, 236, 315
PspGI CCWGG 3 cut(s) 35, 236, 315
PspN4I GGNNCC 2 cut(s) 34, 168
PspPI GGNCC 1 cut(s) 248
PsuI RGATCY 1 cut(s) 268
RsaI GTAC 2 cut(s) 90, 275
RsaNI GTAC 2 cut(s) 89, 274
SaqAI TTAA 1 cut(s) 398
Sau3AI GATC 4 cut(s) 21, 213, 268, 281
Sau96I GGNCC 1 cut(s) 248
SchI GAGTC 2 cut(s) 562, 632
ScrFI CCNGG 3 cut(s) 37, 238, 317
SexAI ACCWGGT 2 cut(s) 35, 315
SfaNI GCATC 1 cut(s) 667
SfcI CTRYAG 2 cut(s) 667, 693
SmlI CTYRAG 3 cut(s) 140, 659, 683
SmoI CTYRAG 3 cut(s) 140, 659, 683
SpeI ACTAGT 1 cut(s) 350
Sse9I AATT 3 cut(s) 287, 395, 461
SspMI CTAG 3 cut(s) 303, 351, 482
StyD4I CCNGG 3 cut(s) 35, 236, 315
TaaI ACNGT 1 cut(s) 576
TaiI ACGT 1 cut(s) 389
TasI AATT 3 cut(s) 287, 395, 461
TfiI GAWTC 2 cut(s) 148, 203
Tru1I TTAA 1 cut(s) 398
Tru9I TTAA 1 cut(s) 398
TscAI CASTG 2 cut(s) 579, 621
TspDTI ATGAA 5 cut(s) 111, 146, 246, 531, 654
TspGWI ACGGA 2 cut(s) 45, 261
TspRI CASTG 2 cut(s) 579, 621
XapI RAATTY 1 cut(s) 461
XspI CTAG 3 cut(s) 303, 351, 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.