RLG00000005214

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
65920416 .. 65920921
506 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005214

Sequence Viewer

Length: 423 bp
ATGAACTTCTTCATCGTGCCTGCCCAATCACGAATTCCTAATTCCGCCACTAACTCCCTTTACATTTCATCGTTGTCCACTGTACTCAAACTAAGTCAAGAACTTGTTCTTAATGTGTTGCAGTTACTTGAAGAGGGACTCAAGGGTTTGTTCCTAGATGGCATTGCTTCATCAGCTGATGAGTTTAGCAAAAATGTGACACTACTAGAGTTGGTCATGTTCTCATGCTTTGGCGCATATGAAGCTCTGCAAGAAGTTCTTGGCATAAATTTTATAGACCCTGAGAAGACTCCACTGGTATTTTCCCGCATAACACCTTCTATTGATAAACCTGCGGTGAAAGAGGCGTGTCACCCTCATGAAAAGATGGTGGCCTTCCTCATTGCATTTAGAGAAAATGCCCTCAAGTCTACTACAGCGTGA

Protein Analysis

141

Amino Acids

15.39

Weight (kDa)

5.12

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 340
AccI GTMKAC 1 cut(s) 410
AciI CCGC 3 cut(s) 45, 307, 335
AcsI RAATTY 2 cut(s) 33, 268
AfaI GTAC 1 cut(s) 84
AgsI TTSAA 1 cut(s) 131
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 2 cut(s) 176, 245
AluI AGCT 2 cut(s) 176, 245
AoxI GGCC 1 cut(s) 372
ApoI RAATTY 2 cut(s) 33, 268
Asp700I GAANNNNTTC 2 cut(s) 8, 105
AspLEI GCGC 1 cut(s) 236
AsuHPI GGTGA 2 cut(s) 344, 349
BbsI GAAGAC 1 cut(s) 293
BccI CCATC 2 cut(s) 152, 361
BfaI CTAG 2 cut(s) 155, 206
BfmI CTRYAG 1 cut(s) 414
BfuAI ACCTGC 1 cut(s) 340
BpiI GAAGAC 1 cut(s) 293
BpuEI CTTGAG 2 cut(s) 125, 389
Bse1I ACTGG 1 cut(s) 300
Bse3DI GCAATG 2 cut(s) 162, 381
BseMI GCAATG 2 cut(s) 162, 381
BseMII CTCAG 1 cut(s) 273
BseNI ACTGG 1 cut(s) 300
BshFI GGCC 1 cut(s) 374
BslFI GGGAC 1 cut(s) 150
BsmFI GGGAC 1 cut(s) 150
BsnI GGCC 1 cut(s) 374
BspACI CCGC 3 cut(s) 45, 307, 335
BspANI GGCC 1 cut(s) 374
BspCNI CTCAG 1 cut(s) 274
BspHI TCATGA 1 cut(s) 358
BspMI ACCTGC 1 cut(s) 340
BsrDI GCAATG 2 cut(s) 162, 381
BsrI ACTGG 1 cut(s) 300
Bst4CI ACNGT 1 cut(s) 82
Bst6I CTCTTC 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 21
BstDEI CTNAG 2 cut(s) 92, 282
BstHHI GCGC 1 cut(s) 236
BstMWI GCNNNNNNNGC 2 cut(s) 173, 242
BstSFI CTRYAG 1 cut(s) 414
BstV2I GAAGAC 1 cut(s) 293
BsuRI GGCC 1 cut(s) 374
BtsIMutI CAGTG 2 cut(s) 78, 293
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 21
CciI TCATGA 1 cut(s) 358
CfoI GCGC 1 cut(s) 236
Csp6I GTAC 1 cut(s) 83
CviAII CATG 3 cut(s) 217, 225, 359
CviJI RGCY 3 cut(s) 176, 245, 374
CviKI_1 RGCY 3 cut(s) 176, 245, 374
CviQI GTAC 1 cut(s) 83
DdeI CTNAG 2 cut(s) 92, 282
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
EciI GGCGGA 1 cut(s) 34
EcoRI GAATTC 1 cut(s) 33
FaeI CATG 3 cut(s) 220, 228, 362
FaiI YATR 8 cut(s) 218, 226, 238, 240, 266, 275, 311, 360
FalI AAGNNNNNCTT 2 cut(s) 243, 275
FaqI GGGAC 1 cut(s) 150
FatI CATG 3 cut(s) 216, 224, 358
FauI CCCGC 1 cut(s) 314
FauNDI CATATG 1 cut(s) 238
FblI GTMKAC 1 cut(s) 410
FspBI CTAG 2 cut(s) 155, 206
GlaI GCGC 1 cut(s) 235
HaeIII GGCC 1 cut(s) 374
HhaI GCGC 1 cut(s) 236
Hin1II CATG 3 cut(s) 220, 228, 362
Hin6I GCGC 1 cut(s) 234
HinP1I GCGC 1 cut(s) 234
HinfI GANTC 2 cut(s) 138, 289
HphI GGTGA 2 cut(s) 344, 349
Hpy166II GTNNAC 2 cut(s) 78, 411
Hpy188III TCNNGA 3 cut(s) 30, 98, 359
Hpy8I GTNNAC 2 cut(s) 78, 411
HpyAV CCTTC 2 cut(s) 327, 385
HpyCH4III ACNGT 1 cut(s) 82
HpyCH4V TGCA 3 cut(s) 121, 250, 386
HpyF10VI GCNNNNNNNGC 2 cut(s) 173, 242
HpyF3I CTNAG 2 cut(s) 92, 282
Hsp92II CATG 3 cut(s) 220, 228, 362
HspAI GCGC 1 cut(s) 234
LpnPI CCDG 4 cut(s) 33, 281, 294, 345
MaeI CTAG 2 cut(s) 155, 206
MaeIII GTNAC 3 cut(s) 123, 196, 350
MboII GAAGA 2 cut(s) 143, 298
MluCI AATT 3 cut(s) 33, 40, 268
MlyI GAGTC 2 cut(s) 132, 283
MnlI CCTC 5 cut(s) 127, 337, 366, 389, 413
MroXI GAANNNNTTC 2 cut(s) 8, 105
MseI TTAA 1 cut(s) 111
MslI CAYNNNNRTG 1 cut(s) 357
MspA1I CMGCKG 1 cut(s) 176
MwoI GCNNNNNNNGC 2 cut(s) 173, 242
NdeI CATATG 1 cut(s) 238
NlaIII CATG 3 cut(s) 220, 228, 362
NmuCI GTSAC 2 cut(s) 196, 350
PagI TCATGA 1 cut(s) 358
PdmI GAANNNNTTC 2 cut(s) 8, 105
PleI GAGTC 2 cut(s) 132, 283
PpsI GAGTC 2 cut(s) 132, 283
PvuII CAGCTG 1 cut(s) 176
RsaI GTAC 1 cut(s) 84
RsaNI GTAC 1 cut(s) 83
RseI CAYNNNNRTG 1 cut(s) 357
SaqAI TTAA 1 cut(s) 111
SchI GAGTC 2 cut(s) 132, 283
SetI ASST 4 cut(s) 178, 247, 319, 334
SfcI CTRYAG 1 cut(s) 414
SmiMI CAYNNNNRTG 1 cut(s) 357
SmlI CTYRAG 2 cut(s) 140, 404
SmoI CTYRAG 2 cut(s) 140, 404
Sse9I AATT 3 cut(s) 33, 40, 268
SsiI CCGC 3 cut(s) 45, 307, 335
SspMI CTAG 2 cut(s) 155, 206
TaaI ACNGT 1 cut(s) 82
TasI AATT 3 cut(s) 33, 40, 268
TatI WGTACW 1 cut(s) 82
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TscAI CASTG 2 cut(s) 85, 300
TseFI GTSAC 2 cut(s) 196, 350
Tsp45I GTSAC 2 cut(s) 196, 350
TspDTI ATGAA 5 cut(s) 17, 57, 159, 255, 375
TspRI CASTG 2 cut(s) 85, 300
XapI RAATTY 2 cut(s) 33, 268
XmiI GTMKAC 1 cut(s) 410
XmnI GAANNNNTTC 2 cut(s) 8, 105
XspI CTAG 2 cut(s) 155, 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.