Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000433

Physical Location & Seq

Genomic Coordinates Forward (+)

15739078 .. 15740225

Gene Structure 1148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G192500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 705 bp

ATGGCAGGGGAAAAGAGTGAGAGTGTGATAGTACATGGGTTTTGGGCAAGCCCTTACTCGAAGAGGGTGGAACTAGCCCTTAAACTGAAGGGCATACCTTATGAATATGTGGAAGAAGATTTGAAGAACAAGACCCCAGAACTGCTCAAGTACAACCCTGTCTACAAGAAAGTTCCTGTGCTTGTTCACAATGGAAAGCCCATTGCTGAGTCTCTTGTCATCCTTCAATATATTGAAGATACTTGGAAAAATGGTCCTCACCTTCTCCCGGAAGATCCCTACAAAAGGGCACAAGTTCGCTTTTGGGTTGATTTTGTCCATCAAAAGTTTTCTGGCATCATGATGACAGCCGCTAAAACTGAGGGGGAAACACAAGAGAAAGCCCTCAATGAGGTGTATGAGCTATTGAAGGTGCTTGAGGAGGGAATTAAGAGCTTTTATCCAGATGGAATTCCAACTTTTGAGGCTGAGAATTTGAGTCTCCTAGAGGTGGTAGCAAGTTCAATACTTTGCCTTTTTAAAGCTCCAGAAGAAATTCTTGGTATCAAAGTTATAGACCCAGAGATAACTCCACTACTGTTCTCTTGGGTGGAAGCTCTAAGAGAGCTATCTCTGGTGCAAGAGACAATCCCTTCTCATGAAAAGATTGTGGCACTTCTTGGGACCTTGAGACAGCTTGCCATCAATCCTCCATCTCAATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

235

Amino Acids

26.49

Weight (kDa)

5.28

Isoelectric Point (pI)

36.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62480 AT5G62480 AT5G62480
fragaria_vesca	FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica	MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica	Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis	pycom06g17020
rosa_chinensis	RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata	RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora	Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa	Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha	Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana	Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	162
AciI	CCGC	1 cut(s)	351
AclWI	GGATC	1 cut(s)	269
AcsI	RAATTY	3 cut(s)	450, 472, 534
AcuI	CTGAAG	1 cut(s)	107
AfaI	GTAC	2 cut(s)	33, 152
AfiI	CCNNNNNNNGG	4 cut(s)	268, 285, 391, 490
AgsI	TTSAA	5 cut(s)	124, 227, 236, 409, 504
AjuI	GAANNNNNNNTTGG	2 cut(s)	522, 554
AluBI	AGCT	6 cut(s)	403, 435, 524, 596, 607, 676
AluI	AGCT	6 cut(s)	403, 435, 524, 596, 607, 676
Alw26I	GTCTC	4 cut(s)	216, 485, 617, 664
AlwI	GGATC	1 cut(s)	269
ApoI	RAATTY	3 cut(s)	450, 472, 534
Asp700I	GAANNNNTTC	1 cut(s)	534
AspS9I	GGNCC	2 cut(s)	254, 663
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	1 cut(s)	251
AvaII	GGWCC	2 cut(s)	254, 663
BaeGI	GKGCMC	1 cut(s)	292
BccI	CCATC	4 cut(s)	327, 440, 689, 700
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	4 cut(s)	216, 485, 617, 664
BfaI	CTAG	2 cut(s)	74, 485
BisI	GCNGC	1 cut(s)	351
BlsI	GCNGC	1 cut(s)	352
Bme1390I	CCNGG	1 cut(s)	269
Bme18I	GGWCC	2 cut(s)	254, 663
BmgT120I	GGNCC	2 cut(s)	254, 663
BmiI	GGNNCC	1 cut(s)	664
BmrFI	CCNGG	1 cut(s)	269
BmsI	GCATC	1 cut(s)	345
BpmI	CTGGAG	1 cut(s)	510
BpuEI	CTTGAG	3 cut(s)	131, 437, 688
BpuMI	CCSGG	1 cut(s)	269
Bsc4I	CCNNNNNNNGG	4 cut(s)	268, 285, 391, 490
Bse3DI	GCAATG	1 cut(s)	201
BseGI	GGATG	1 cut(s)	219
BseLI	CCNNNNNNNGG	4 cut(s)	268, 285, 391, 490
BseMI	GCAATG	1 cut(s)	201
BseMII	CTCAG	3 cut(s)	198, 351, 459
BseRI	GAGGAG	1 cut(s)	434
BseSI	GKGCMC	1 cut(s)	292
BsiSI	CCGG	1 cut(s)	269
BslFI	GGGAC	1 cut(s)	676
BslI	CCNNNNNNNGG	4 cut(s)	268, 285, 391, 490
BsmAI	GTCTC	4 cut(s)	216, 485, 617, 664
BsmFI	GGGAC	1 cut(s)	676
Bsp1286I	GDGCHC	1 cut(s)	292
Bsp143I	GATC	1 cut(s)	274
BspACI	CCGC	1 cut(s)	351
BspCNI	CTCAG	3 cut(s)	199, 352, 460
BspHI	TCATGA	2 cut(s)	339, 637
BspLI	GGNNCC	1 cut(s)	664
BspPI	GGATC	1 cut(s)	269
BsrDI	GCAATG	1 cut(s)	201
BssMI	GATC	1 cut(s)	274
Bst4CI	ACNGT	1 cut(s)	579
Bst6I	CTCTTC	1 cut(s)	56
BstC8I	GCNNGC	2 cut(s)	49, 678
BstDEI	CTNAG	4 cut(s)	207, 360, 468, 599
BstENI	CCTNNNNNAGG	2 cut(s)	283, 389
BstF5I	GGATG	1 cut(s)	219
BstKTI	GATC	1 cut(s)	277
BstMAI	GTCTC	4 cut(s)	216, 485, 617, 664
BstMBI	GATC	1 cut(s)	274
BstSCI	CCNGG	1 cut(s)	267
BstSLI	GKGCMC	1 cut(s)	292
BstX2I	RGATCY	1 cut(s)	274
BstYI	RGATCY	1 cut(s)	274
BtsCI	GGATG	1 cut(s)	219
Cac8I	GCNNGC	2 cut(s)	49, 678
CciI	TCATGA	2 cut(s)	339, 637
Cfr13I	GGNCC	2 cut(s)	254, 663
Csp6I	GTAC	2 cut(s)	32, 151
CviAII	CATG	3 cut(s)	35, 340, 638
CviQI	GTAC	2 cut(s)	32, 151
DdeI	CTNAG	4 cut(s)	207, 360, 468, 599
DpnI	GATC	1 cut(s)	276
DpnII	GATC	1 cut(s)	274
DraI	TTTAAA	1 cut(s)	520
Eam1104I	CTCTTC	1 cut(s)	56
EarI	CTCTTC	1 cut(s)	56
Eco47I	GGWCC	2 cut(s)	254, 663
Eco57I	CTGAAG	1 cut(s)	107
EcoNI	CCTNNNNNAGG	2 cut(s)	283, 389
EcoO109I	RGGNCCY	1 cut(s)	663
EcoRI	GAATTC	1 cut(s)	450
FaeI	CATG	3 cut(s)	38, 343, 641
FaiI	YATR	9 cut(s)	36, 95, 102, 108, 231, 341, 399, 554, 639
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	1 cut(s)	676
FatI	CATG	3 cut(s)	34, 339, 637
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	1 cut(s)	351
FokI	GGATG	1 cut(s)	206
Fsp4HI	GCNGC	1 cut(s)	351
FspBI	CTAG	2 cut(s)	74, 485
GluI	GCNGC	1 cut(s)	351
GsuI	CTGGAG	1 cut(s)	510
HapII	CCGG	1 cut(s)	269
Hin1II	CATG	3 cut(s)	38, 343, 641
HinfI	GANTC	2 cut(s)	209, 478
HpaII	CCGG	1 cut(s)	269
HphI	GGTGA	1 cut(s)	251
Hpy166II	GTNNAC	2 cut(s)	163, 187
Hpy188III	TCNNGA	4 cut(s)	340, 443, 527, 638
Hpy8I	GTNNAC	2 cut(s)	163, 187
HpyAV	CCTTC	5 cut(s)	82, 233, 272, 403, 642
HpyCH4III	ACNGT	1 cut(s)	579
HpyCH4V	TGCA	1 cut(s)	619
HpyF3I	CTNAG	4 cut(s)	207, 360, 468, 599
Hsp92II	CATG	3 cut(s)	38, 343, 641
Kzo9I	GATC	1 cut(s)	274
LmnI	GCTCC	1 cut(s)	529
LpnPI	CCDG	9 cut(s)	150, 171, 189, 282, 318, 456, 540, 573, 599
LweI	GCATC	1 cut(s)	345
MaeI	CTAG	2 cut(s)	74, 485
MalI	GATC	1 cut(s)	276
MboI	GATC	1 cut(s)	274
MboII	GAAGA	7 cut(s)	73, 125, 128, 136, 248, 284, 542
MflI	RGATCY	1 cut(s)	274
MhlI	GDGCHC	1 cut(s)	292
MluCI	AATT	4 cut(s)	426, 450, 472, 534
MlyI	GAGTC	2 cut(s)	218, 487
MmeI	TCCRAC	1 cut(s)	479
MroXI	GAANNNNTTC	1 cut(s)	534
MseI	TTAA	3 cut(s)	81, 429, 519
MslI	CAYNNNNRTG	1 cut(s)	341
MspI	CCGG	1 cut(s)	269
MspR9I	CCNGG	1 cut(s)	269
NciI	CCSGG	1 cut(s)	269
NdeII	GATC	1 cut(s)	274
NlaIII	CATG	3 cut(s)	38, 343, 641
NlaIV	GGNNCC	1 cut(s)	664
PagI	TCATGA	2 cut(s)	339, 637
PdmI	GAANNNNTTC	1 cut(s)	534
PfoI	TCCNGGA	1 cut(s)	267
PkrI	GCNGC	1 cut(s)	352
PleI	GAGTC	2 cut(s)	217, 486
PpsI	GAGTC	2 cut(s)	217, 486
PpuMI	RGGWCCY	1 cut(s)	663
Psp5II	RGGWCCY	1 cut(s)	663
PspN4I	GGNNCC	1 cut(s)	664
PspPI	GGNCC	2 cut(s)	254, 663
PspPPI	RGGWCCY	1 cut(s)	663
PsuI	RGATCY	1 cut(s)	274
RsaI	GTAC	2 cut(s)	33, 152
RsaNI	GTAC	2 cut(s)	32, 151
RseI	CAYNNNNRTG	1 cut(s)	341
SaqAI	TTAA	3 cut(s)	81, 429, 519
SatI	GCNGC	1 cut(s)	351
Sau3AI	GATC	1 cut(s)	274
Sau96I	GGNCC	2 cut(s)	254, 663
SchI	GAGTC	2 cut(s)	218, 487
ScrFI	CCNGG	1 cut(s)	269
SduI	GDGCHC	1 cut(s)	292
SfaNI	GCATC	1 cut(s)	345
SinI	GGWCC	2 cut(s)	254, 663
SmiMI	CAYNNNNRTG	1 cut(s)	341
SmlI	CTYRAG	3 cut(s)	146, 416, 667
SmoI	CTYRAG	3 cut(s)	146, 416, 667
Sse9I	AATT	4 cut(s)	426, 450, 472, 534
SsiI	CCGC	1 cut(s)	351
SspMI	CTAG	2 cut(s)	74, 485
StyD4I	CCNGG	1 cut(s)	267
TaaI	ACNGT	1 cut(s)	579
TaqI	TCGA	1 cut(s)	59
TasI	AATT	4 cut(s)	426, 450, 472, 534
TatI	WGTACW	2 cut(s)	31, 150
TauI	GCSGC	1 cut(s)	353
Tru1I	TTAA	3 cut(s)	81, 429, 519
Tru9I	TTAA	3 cut(s)	81, 429, 519
TspDTI	ATGAA	2 cut(s)	117, 654
VpaK11BI	GGWCC	2 cut(s)	254, 663
XagI	CCTNNNNNAGG	2 cut(s)	283, 389
XapI	RAATTY	3 cut(s)	450, 472, 534
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	1 cut(s)	534
XspI	CTAG	2 cut(s)	74, 485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.