Rh7AG040200

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
2704786 .. 2705627
842 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG040200.1

Sequence Viewer

Length: 318 bp
ATGATCACAGAGGGAGGAGCACAAGAGAAAGCTATCAAGGAAATGTTTGAGAAATTAAAGTTAATTGAAGAGGGACTCAAGGGTTTGTTCCCAGATGGCATTGCTTCATCAGGTGATGAGTTTAGCAAAAATGTGACACTACTAGAGTTGGTCATGTTCTCATACTTTGGCGCATATGAAGCTCTGCAAGAAGTTCTTGGCAAAAATGTTATGCAAGAAGTATTTTCCTGCATAACAGCTCCAGTTGAGATACCTGTGGTGAAAAAGGCATGTCACCCTCATGAAAAGATGGCGTTCCTCATTGTATTTACTATTTAG

Protein Analysis

105

Amino Acids

11.64

Weight (kDa)

4.98

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000433)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62480 AT5G62480 AT5G62480
fragaria_vesca FvH4_5g15010 FvH4_5g15020 FvH4_5g15100 FvH4_5g15110 FvH4_5g15120 FvH4_5g15121 FvH4_5g15121 FvH4_5g15121
malus_domestica MD06G1192000.v1.1 MD06G1192100.v1.1
prunus_persica Prupe.5G191500_v2.0.a1 Prupe.5G191600_v2.0.a1 Prupe.5G191800_v2.0.a1 Prupe.5G192500_v2.0.a1 Prupe.5G192600_v2.0.a1 Prupe.5G192800_v2.0.a1
pyrus_communis pycom06g17020
rosa_chinensis RchiOBHm_Chr7g0181061 RchiOBHm_Chr7g0181081 RchiOBHm_Chr7g0181091 RchiOBHm_Chr7g0181101 RchiOBHm_Chr7g0181111 RchiOBHm_Chr7g0181241 RchiOBHm_Chr7g0181251 RchiOBHm_Chr7g0181261
rosa_laevigata RLG00000005202 RLG00000005203 RLG00000005204 RLG00000005213 RLG00000005214 RLG00000005215 RLG00000005216
rosa_multiflora Rmu_co8113330.1_g000001 Rmu_co8221866.1_g000001 Rmu_sc0001147.1_g000011 Rmu_sc0001147.1_g000012 Rmu_sc0001147.1_g000013 Rmu_sc0001147.1_g000024 Rmu_sc0001147.1_g000025 Rmu_sc0007079.1_g000005 Rmu_sc0007079.1_g000009 Rmu_sc0007079.1_g000010 Rmu_sc0007079.1_g000011 Rmu_sc0007079.1_g000012 Rmu_sc0015707.1_g000001 Rmu_sc0041900.1_g000001
rosa_roxburghii Rroxscaffold_3G00272160 Rroxscaffold_3G00272170 Rroxscaffold_3G00272180 Rroxscaffold_3G00272270 Rroxscaffold_3G00272280 Rroxscaffold_3G00272290 Rroxscaffold_3G00272300
rosa_rugosa Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0439800 Rorug06G0439900 Rorug06G0440000
rosa_samantha Rh7AG040100 Rh7AG040200 Rh7AG040300 Rh7AG040400 Rh7AG041500 Rh7AG041600 Rh7AG041700 Rh7BG039500 Rh7BG039600 Rh7BG039800 Rh7BG040800 Rh7CG041300 Rh7CG041400 Rh7CG041600 Rh7CG041700 Rh7CG041800 Rh7CG043000 Rh7CG043100 Rh7CG043200 Rh7DG039700 Rh7DG039900 Rh7DG040000 Rh7DG040100 Rh7DG040200 Rh7DG041300 Rh7DG041400 Rh7DG041500
rosa_wichuraiana Rw7G003310 Rw7G003320 Rw7G003330 Rw7G003420 Rw7G003430 Rw7G003440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 68
AluBI AGCT 3 cut(s) 32, 182, 239
AluI AGCT 3 cut(s) 32, 182, 239
Alw21I GWGCWC 1 cut(s) 22
AspLEI GCGC 1 cut(s) 173
AsuHPI GGTGA 3 cut(s) 125, 266, 271
Bbv12I GWGCWC 1 cut(s) 22
BccI CCATC 2 cut(s) 89, 283
BclI TGATCA 1 cut(s) 3
BfaI CTAG 1 cut(s) 143
BpmI CTGGAG 1 cut(s) 225
BpuEI CTTGAG 1 cut(s) 62
Bse1I ACTGG 1 cut(s) 242
Bse3DI GCAATG 1 cut(s) 99
BseMI GCAATG 1 cut(s) 99
BseNI ACTGG 1 cut(s) 242
BseRI GAGGAG 1 cut(s) 30
BsiHKAI GWGCWC 1 cut(s) 22
BslFI GGGAC 1 cut(s) 87
BsmFI GGGAC 1 cut(s) 87
Bsp1286I GDGCHC 1 cut(s) 22
Bsp143I GATC 1 cut(s) 3
BspHI TCATGA 1 cut(s) 280
BsrDI GCAATG 1 cut(s) 99
BsrI ACTGG 1 cut(s) 242
BssMI GATC 1 cut(s) 3
Bst6I CTCTTC 1 cut(s) 63
BstHHI GCGC 1 cut(s) 173
BstKTI GATC 1 cut(s) 6
BstMBI GATC 1 cut(s) 3
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstNSI RCATGY 1 cut(s) 273
CciI TCATGA 1 cut(s) 280
CfoI GCGC 1 cut(s) 173
CviAII CATG 3 cut(s) 154, 270, 281
CviJI RGCY 3 cut(s) 32, 182, 239
CviKI_1 RGCY 3 cut(s) 32, 182, 239
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
FaeI CATG 3 cut(s) 157, 273, 284
FaiI YATR 8 cut(s) 155, 163, 175, 177, 212, 233, 271, 282
FalI AAGNNNNNCTT 2 cut(s) 180, 212
FaqI GGGAC 1 cut(s) 87
FatI CATG 3 cut(s) 153, 269, 280
FauNDI CATATG 1 cut(s) 175
FbaI TGATCA 1 cut(s) 3
FspBI CTAG 1 cut(s) 143
GlaI GCGC 1 cut(s) 172
GsuI CTGGAG 1 cut(s) 225
HhaI GCGC 1 cut(s) 173
Hin1II CATG 3 cut(s) 157, 273, 284
Hin6I GCGC 1 cut(s) 171
HinP1I GCGC 1 cut(s) 171
HinfI GANTC 1 cut(s) 75
HphI GGTGA 3 cut(s) 125, 266, 271
Hpy188III TCNNGA 1 cut(s) 281
HpyCH4V TGCA 3 cut(s) 187, 214, 231
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
Hsp92II CATG 3 cut(s) 157, 273, 284
HspAI GCGC 1 cut(s) 171
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 1 cut(s) 3
LmnI GCTCC 2 cut(s) 17, 244
LpnPI CCDG 5 cut(s) 96, 105, 241, 255, 267
MaeI CTAG 1 cut(s) 143
MaeIII GTNAC 2 cut(s) 133, 272
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MboII GAAGA 1 cut(s) 80
MhlI GDGCHC 1 cut(s) 22
MluCI AATT 2 cut(s) 53, 63
MlyI GAGTC 1 cut(s) 69
MnlI CCTC 5 cut(s) 4, 8, 64, 288, 308
MseI TTAA 2 cut(s) 56, 62
MslI CAYNNNNRTG 1 cut(s) 279
MwoI GCNNNNNNNGC 1 cut(s) 179
NdeI CATATG 1 cut(s) 175
NdeII GATC 1 cut(s) 3
NlaIII CATG 3 cut(s) 157, 273, 284
NmuCI GTSAC 2 cut(s) 133, 272
NspI RCATGY 1 cut(s) 273
PagI TCATGA 1 cut(s) 280
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
RseI CAYNNNNRTG 1 cut(s) 279
SaqAI TTAA 2 cut(s) 56, 62
Sau3AI GATC 1 cut(s) 3
SchI GAGTC 1 cut(s) 69
SduI GDGCHC 1 cut(s) 22
SetI ASST 5 cut(s) 34, 115, 184, 241, 256
SmiMI CAYNNNNRTG 1 cut(s) 279
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
Sse9I AATT 2 cut(s) 53, 63
SspMI CTAG 1 cut(s) 143
TasI AATT 2 cut(s) 53, 63
Tru1I TTAA 2 cut(s) 56, 62
Tru9I TTAA 2 cut(s) 56, 62
TseFI GTSAC 2 cut(s) 133, 272
Tsp45I GTSAC 2 cut(s) 133, 272
TspDTI ATGAA 3 cut(s) 96, 192, 297
XceI RCATGY 1 cut(s) 273
XspI CTAG 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.