Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000804

Physical Location & Seq

Genomic Coordinates Reverse (-)

28672339 .. 28676777

Gene Structure 4439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g38770.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGTCTCCCACTTCTCAGCGTCACACTCGCTCACGCTCTCATTCTCACTCCCACGCGCCGCCGCAGCCTCAGCCTCAGCCGCAGCTCGTCTCCATCGACCCCAAAATCTGGCGAGCCTGCGCCGGCAACTCCATCACCATCCCCACTCTCCATTCTAGGGTTTACTACTTCCCCCAGGGCCACCTCGAACACTCCACCTCCGCTTCGTCTCCGGTTCTTCTCTCTCCTCAGGTTCTCTCCAGGCCTCTCATTCTCTGCCGCGTCGCCGCCGTGAAATTTCTCGCCGATCCCACCACCGACGAGGTCTTCGCCAAGCTCCTCCTCCACCCCGTCCACCCCGGCCTCTCCCCACACCACCGCGAACTCAGCGCCGCCGCGACGGAGGAGGTGGAGAGCGAAAACGACGATAGGGTGGTGTCGTTCGCTAAGATCTTGACTCCTTCCGACGCCAACAATGGCGGCGGTTTCTCCGTCCCGAGGTTCTGCGCTGATTCGATTTTCCCGCCGCTCAACTACCAGGCCGAGCCGCCGGTCCAGACGCTCTCCGTCACCGACCTCCACGGCGTCGTTTGGGACTTCCGCCACATCTACCGCGGCACTCCACGGCGGCACTTGCTCACTACCGGCTGGAGCAAGTTCGTCAATAGCAAGATGCTCGTCGCCGGCGACTCCGTGGTGTTTATGAGAAACTCCGGAGGCGGAGAGATGTACGTCGGGGTGAGGCGCACCGTGAGGGCCAGCCACGGCGGCGATTGCGCCAGGTGGAGCTCTCACATTGGTCTGAAGTCGTCGTCGGAGGAAGGCTCTGGAGGGGACGGGTTTAAGACGAAGCTTTCGGCGGAGGCTGTGGTGGAAGCGGCCGAGATGGCGGCGCAGGAAATGCCGTTTGAGGTGGTGTATTATCCGAAAGCTGGGTGGGCTGATTTCGTGGTGAAGGCGGAGGTGGTGGAGAAGGCATTGAATGTGTTTTGGACGGCTGGGATGAGAGTGAAAATGGCTATGGAGACTGATGACTCCTCCAGGATGACTTGGTTTCAGGGCACTCTGTCTTCGGTGTTTGTTCCGGAGAGTGGGCCTTGGAAGGGATCTCCATGGCGTATGCTTCAGGTTACATGGGATGAACCTGAAGTTCTGCAGAATGCCAAGAGGGTGAGCCCATGGCAAGTTGACTTTGTCGCATCTACACCTTCTCTTCATCCTGCACCTCCATTTCATACTGTATATCCCCTTACAAAGAGATTCAGAGCTCCACTGAATCCTGCGCTGCTGAGGCATGGAGAGGAAGAATTCATGATACCTATGACAGGAGCAGCTAATTCAACAATGGGGCAGTACAATGCTTCCTTGTTGAACTATAACATTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATTCTGTGATTCCAATGCGTCTCATTTGTTTAATGAAAGTACTCCTCGGATGTGCACCTATAATTCCTTTGGCAACAACAACATGGCGCCAAGTCTGAAAAGGGTGTCTACTGAGTTGAACATTGGAAGTCCACAGTCTGATCAATTATCACCAGATAGCCAGAGTAGTCCACAATCCTTTGGCACGGAACTTGATGGGAACCGAAACTGCAACTCGAGAAAGGTTGGGAGAAGTTCTTTTCAACTCTTTGGGCAGACCATTCCTATCAACGATATTGATGCTGTTGCTTGTACTGGAGATGGTGGCAACATAGGGTACAATGAAACTGAACTTCTGAACAACCCGCTGGATTCTTATACCAAACTGCTAGAAAGGATTGATGTTCGAGTCCCAGCTGTTGAAGCTTGTACTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010927 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0022622 GO:0023052 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033036 GO:0033037 GO:0042221 GO:0042545 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048364 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0051716 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0085029 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

605

Amino Acids

66.4

Weight (kDa)

6.38

Isoelectric Point (pI)

58.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	141 - 243	3.4e-23	B3 DNA binding domain
BRWD_AD	PF25313	290 - 391	1.3e-07	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	309 - 392	4.5e-28	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77850 AT1G77850 ATMG00940
fragaria_vesca	FvH4_5g38640 FvH4_5g38681 FvH4_5g38690 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_6g33200
malus_domestica	MD00G1103900.v1.1 MD15G1359400.v1.1
prunus_persica	Prupe.1G507000_v2.0.a1
pyrus_communis	pycom08g14870 pycom15g32180
rosa_chinensis	RchiOBHm_Chr7g0240691
rosa_laevigata	RLG00000000626 RLG00000000646 RLG00000000656 RLG00000000659 RLG00000000668 RLG00000018665
rosa_multiflora	Rmu_co8133848.1_g000001 Rmu_co8172656.1_g000002 Rmu_sc0001483.1_g000002 Rmu_sc0001921.1_g000034 Rmu_sc0002517.1_g000004 Rmu_sc0004799.1_g000003 Rmu_sc0004799.1_g000004 Rmu_sc0011947.1_g000001 Rmu_sc0023480.1_g000003 Rmu_sc0030169.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121890 Rroxscaffold_3G00219660 Rroxscaffold_3G00219860 Rroxscaffold_3G00219880 Rroxscaffold_3G00236300
rosa_rugosa	Rorug02G0236900 Rorug02G0237000 Rorug07G0337600 Rorug07G0338300
rosa_samantha	Rh2AG295100 Rh7AG491700 Rh7AG492100 Rh7AG492900 Rh7BG464200 Rh7BG464600 Rh7BG464900 Rh7CG508200 Rh7CG508500 Rh7CG509100 Rh7CG509700 Rh7CG510000 Rh7CG511300 Rh7DG475700 Rh7DG476000 Rh7DG476700 Rh7DG477300 Rh7DG477600 Rh7DG478100
rosa_wichuraiana	Rw0G013480 Rw7G041210 Rw7G041230 Rw7G041320 Rw7G041490 Rw7G041510 Rw7G041550 Rw7G041690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1483
AccB7I	CCANNNNNTGG	1 cut(s)	108
AccBSI	CCGCTC	1 cut(s)	508
AccI	GTMKAC	1 cut(s)	1505
AccII	CGCG	5 cut(s)	56, 261, 360, 377, 594
AccIII	TCCGGA	2 cut(s)	692, 1063
AclWI	GGATC	2 cut(s)	281, 1093
AcoI	YGGCCR	1 cut(s)	858
AcsI	RAATTY	2 cut(s)	275, 1286
AcuI	CTGAAG	3 cut(s)	803, 1088, 1146
AcyI	GRCGYC	3 cut(s)	447, 564, 1484
AfaI	GTAC	6 cut(s)	710, 1334, 1438, 1690, 1715, 1807
AfiI	CCNNNNNNNGG	7 cut(s)	108, 157, 477, 911, 1070, 1082, 1304
AgsI	TTSAA	6 cut(s)	961, 1320, 1351, 1516, 1640, 1799
AjnI	CCWGG	6 cut(s)	174, 239, 516, 758, 1019, 1385
AluBI	AGCT	9 cut(s)	85, 316, 768, 832, 911, 1247, 1313, 1793, 1802
AluI	AGCT	9 cut(s)	85, 316, 768, 832, 911, 1247, 1313, 1793, 1802
Alw21I	GWGCWC	3 cut(s)	770, 1249, 1454
Alw26I	GTCTC	5 cut(s)	9, 94, 213, 998, 1422
Alw44I	GTGCAC	1 cut(s)	1450
AlwI	GGATC	2 cut(s)	281, 1093
Ama87I	CYCGRG	2 cut(s)	475, 1612
Aor13HI	TCCGGA	2 cut(s)	692, 1063
AoxI	GGCC	7 cut(s)	178, 242, 340, 519, 735, 858, 1073
ApaLI	GTGCAC	1 cut(s)	1450
ApeKI	GCWGC	4 cut(s)	64, 82, 1264, 1310
ApoI	RAATTY	2 cut(s)	275, 1286
ArsI	GACNNNNNNTTYG	4 cut(s)	290, 322, 817, 849
AspLEI	GCGC	9 cut(s)	58, 122, 371, 488, 726, 758, 874, 1264, 1486
AspS9I	GGNCC	4 cut(s)	178, 532, 735, 1073
AsuC2I	CCSGG	1 cut(s)	339
AsuHPI	GGTGA	6 cut(s)	127, 541, 730, 943, 1162, 1539
AvaI	CYCGRG	2 cut(s)	475, 1612
AvaII	GGWCC	1 cut(s)	532
AxyI	CCTNAGG	1 cut(s)	228
BaeGI	GKGCMC	2 cut(s)	1043, 1454
BanI	GGYRCC	1 cut(s)	1483
BanII	GRGCYC	3 cut(s)	770, 1157, 1249
BbsI	GAAGAC	2 cut(s)	298, 1041
Bbv12I	GWGCWC	3 cut(s)	770, 1249, 1454
BbvCI	CCTCAGC	3 cut(s)	69, 75, 1268
BbvI	GCAGC	4 cut(s)	76, 94, 1251, 1322
BccI	CCATC	6 cut(s)	101, 140, 146, 859, 1586, 1691
BceAI	ACGGC	6 cut(s)	254, 577, 620, 760, 868, 990
BcgI	CGANNNNNNTGC	4 cut(s)	637, 671, 1658, 1692
BciT130I	CCWGG	6 cut(s)	176, 241, 518, 760, 1021, 1387
BclI	TGATCA	1 cut(s)	1537
BcnI	CCSGG	1 cut(s)	339
BcoDI	GTCTC	5 cut(s)	9, 94, 213, 998, 1422
BfaI	CTAG	2 cut(s)	156, 1766
BfmI	CTRYAG	1 cut(s)	1133
BfoI	RGCGCY	2 cut(s)	372, 1487
BglI	GCCNNNNNGGC	2 cut(s)	747, 866
BglII	AGATCT	2 cut(s)	429, 1393
BmcAI	AGTACT	1 cut(s)	1438
Bme1390I	CCNGG	7 cut(s)	176, 241, 339, 518, 760, 1021, 1387
Bme18I	GGWCC	1 cut(s)	532
BmeT110I	CYCGRG	2 cut(s)	475, 1612
BmgT120I	GGNCC	4 cut(s)	178, 532, 735, 1073
BmiI	GGNNCC	3 cut(s)	1384, 1485, 1598
BmrFI	CCNGG	7 cut(s)	176, 241, 339, 518, 760, 1021, 1387
BmsI	GCATC	3 cut(s)	642, 1187, 1666
BpiI	GAAGAC	2 cut(s)	298, 1041
BplI	GAGNNNNNCTC	2 cut(s)	788, 820
BpmI	CTGGAG	5 cut(s)	223, 649, 828, 1003, 1713
Bpu10I	CCTNAGC	3 cut(s)	69, 75, 1268
BpuMI	CCSGG	1 cut(s)	339
BsaHI	GRCGYC	3 cut(s)	447, 564, 1484
BsaWI	WCCGGW	3 cut(s)	211, 692, 1063
BsaXI	ACNNNNNCTCC	2 cut(s)	182, 212
Bsc4I	CCNNNNNNNGG	7 cut(s)	108, 157, 477, 911, 1070, 1082, 1304
Bse118I	RCCGGY	4 cut(s)	122, 529, 623, 662
Bse1I	ACTGG	1 cut(s)	1696
Bse21I	CCTNAGG	1 cut(s)	228
BseAI	TCCGGA	2 cut(s)	692, 1063
BseBI	CCWGG	6 cut(s)	176, 241, 518, 760, 1021, 1387
BseGI	GGATG	6 cut(s)	138, 987, 1029, 1123, 1195, 1452
BseLI	CCNNNNNNNGG	7 cut(s)	108, 157, 477, 911, 1070, 1082, 1304
BseMII	CTCAG	7 cut(s)	29, 83, 89, 242, 379, 1259, 1500
BseNI	ACTGG	1 cut(s)	1696
BseRI	GAGGAG	6 cut(s)	216, 308, 311, 398, 1006, 1431
BseSI	GKGCMC	2 cut(s)	1043, 1454
BseX3I	CGGCCG	1 cut(s)	858
BseXI	GCAGC	4 cut(s)	76, 94, 1251, 1322
BseYI	CCCAGC	3 cut(s)	911, 977, 1789
BsgI	GTGCAG	1 cut(s)	1185
Bsh1236I	CGCG	5 cut(s)	56, 261, 360, 377, 594
Bsh1285I	CGRYCG	1 cut(s)	861
BshFI	GGCC	7 cut(s)	180, 244, 342, 521, 737, 860, 1075
BshNI	GGYRCC	1 cut(s)	1483
BsiEI	CGRYCG	1 cut(s)	861
BsiHKAI	GWGCWC	3 cut(s)	770, 1249, 1454
BsiHKCI	CYCGRG	2 cut(s)	475, 1612
BsiSI	CCGG	8 cut(s)	123, 212, 339, 530, 624, 663, 693, 1064
BslFI	GGGAC	4 cut(s)	458, 587, 827, 1772
BslI	CCNNNNNNNGG	7 cut(s)	108, 157, 477, 911, 1070, 1082, 1304
BsmAI	GTCTC	5 cut(s)	9, 94, 213, 998, 1422
BsmBI	CGTCTC	3 cut(s)	94, 213, 1422
BsmFI	GGGAC	4 cut(s)	458, 587, 827, 1772
BsmI	GAATGC	1 cut(s)	1144
BsnI	GGCC	7 cut(s)	180, 244, 342, 521, 737, 860, 1075
BsoBI	CYCGRG	2 cut(s)	475, 1612
Bsp1286I	GDGCHC	5 cut(s)	770, 1043, 1157, 1249, 1454
Bsp13I	TCCGGA	2 cut(s)	692, 1063
Bsp143I	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
Bsp19I	CCATGG	2 cut(s)	1091, 1157
BspANI	GGCC	7 cut(s)	180, 244, 342, 521, 737, 860, 1075
BspCNI	CTCAG	7 cut(s)	28, 82, 88, 241, 378, 1260, 1501
BspEI	TCCGGA	2 cut(s)	692, 1063
BspFNI	CGCG	5 cut(s)	56, 261, 360, 377, 594
BspHI	TCATGA	1 cut(s)	1290
BspLI	GGNNCC	3 cut(s)	1384, 1485, 1598
BspMAI	CTGCAG	1 cut(s)	1137
BspPI	GGATC	2 cut(s)	281, 1093
BspT107I	GGYRCC	1 cut(s)	1483
BsrBI	CCGCTC	1 cut(s)	508
BsrFI	RCCGGY	4 cut(s)	122, 529, 623, 662
BsrI	ACTGG	1 cut(s)	1696
BssAI	RCCGGY	4 cut(s)	122, 529, 623, 662
BssMI	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
BssNI	GRCGYC	3 cut(s)	447, 564, 1484
BssT1I	CCWWGG	3 cut(s)	1076, 1091, 1157
Bst2UI	CCWGG	6 cut(s)	176, 241, 518, 760, 1021, 1387
Bst4CI	ACNGT	3 cut(s)	730, 1219, 1533
Bst6I	CTCTTC	1 cut(s)	1197
BstACI	GRCGYC	3 cut(s)	447, 564, 1484
BstAPI	GCANNNNNTGC	1 cut(s)	880
BstC8I	GCNNGC	7 cut(s)	114, 118, 124, 664, 739, 1372, 1376
BstDEI	CTNAG	8 cut(s)	15, 69, 75, 228, 365, 426, 1268, 1509
BstDSI	CCRYGG	7 cut(s)	559, 592, 602, 672, 742, 1091, 1157
BstENI	CCTNNNNNAGG	1 cut(s)	1302
BstF5I	GGATG	6 cut(s)	138, 987, 1029, 1123, 1195, 1452
BstFNI	CGCG	5 cut(s)	56, 261, 360, 377, 594
BstH2I	RGCGCY	2 cut(s)	372, 1487
BstHHI	GCGC	9 cut(s)	58, 122, 371, 488, 726, 758, 874, 1264, 1486
BstKTI	GATC	5 cut(s)	289, 432, 1088, 1396, 1540
BstMAI	GTCTC	5 cut(s)	9, 94, 213, 998, 1422
BstMBI	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
BstMCI	CGRYCG	1 cut(s)	861
BstNI	CCWGG	6 cut(s)	176, 241, 518, 760, 1021, 1387
BstNSI	RCATGY	1 cut(s)	1378
BstSCI	CCNGG	7 cut(s)	174, 239, 337, 516, 758, 1019, 1385
BstSFI	CTRYAG	1 cut(s)	1133
BstSLI	GKGCMC	2 cut(s)	1043, 1454
BstUI	CGCG	5 cut(s)	56, 261, 360, 377, 594
BstV1I	GCAGC	4 cut(s)	76, 94, 1251, 1322
BstV2I	GAAGAC	2 cut(s)	298, 1041
BstX2I	RGATCY	3 cut(s)	429, 1085, 1393
BstYI	RGATCY	3 cut(s)	429, 1085, 1393
BstZI	CGGCCG	1 cut(s)	858
Bsu36I	CCTNAGG	1 cut(s)	228
BsuRI	GGCC	7 cut(s)	180, 244, 342, 521, 737, 860, 1075
BtgI	CCRYGG	7 cut(s)	559, 592, 602, 672, 742, 1091, 1157
BtsCI	GGATG	6 cut(s)	138, 987, 1029, 1123, 1195, 1452
BtsIMutI	CAGTG	1 cut(s)	1250
Cac8I	GCNNGC	7 cut(s)	114, 118, 124, 664, 739, 1372, 1376
CciI	TCATGA	1 cut(s)	1290
CfoI	GCGC	9 cut(s)	58, 122, 371, 488, 726, 758, 874, 1264, 1486
Cfr10I	RCCGGY	4 cut(s)	122, 529, 623, 662
Cfr13I	GGNCC	4 cut(s)	178, 532, 735, 1073
Cfr42I	CCGCGG	1 cut(s)	595
CseI	GACGC	6 cut(s)	8, 250, 455, 547, 553, 1404
Csp6I	GTAC	6 cut(s)	709, 1333, 1437, 1689, 1714, 1806
CviAII	CATG	7 cut(s)	1092, 1113, 1158, 1274, 1291, 1375, 1480
CviQI	GTAC	6 cut(s)	709, 1333, 1437, 1689, 1714, 1806
DdeI	CTNAG	8 cut(s)	15, 69, 75, 228, 365, 426, 1268, 1509
DinI	GGCGCC	1 cut(s)	1485
DpnI	GATC	5 cut(s)	288, 431, 1087, 1395, 1539
DpnII	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
EaeI	YGGCCR	1 cut(s)	858
EagI	CGGCCG	1 cut(s)	858
Eam1104I	CTCTTC	1 cut(s)	1197
EarI	CTCTTC	1 cut(s)	1197
EciI	GGCGGA	4 cut(s)	569, 714, 854, 953
Ecl136II	GAGCTC	2 cut(s)	768, 1247
EclXI	CGGCCG	1 cut(s)	858
Eco130I	CCWWGG	3 cut(s)	1076, 1091, 1157
Eco147I	AGGCCT	1 cut(s)	244
Eco24I	GRGCYC	3 cut(s)	770, 1157, 1249
Eco47I	GGWCC	1 cut(s)	532
Eco52I	CGGCCG	1 cut(s)	858
Eco53kI	GAGCTC	2 cut(s)	768, 1247
Eco57I	CTGAAG	3 cut(s)	803, 1088, 1146
Eco81I	CCTNAGG	1 cut(s)	228
Eco88I	CYCGRG	2 cut(s)	475, 1612
EcoICRI	GAGCTC	2 cut(s)	768, 1247
EcoNI	CCTNNNNNAGG	1 cut(s)	1302
EcoRI	GAATTC	1 cut(s)	1286
EcoRII	CCWGG	6 cut(s)	174, 239, 516, 758, 1019, 1385
EcoT14I	CCWWGG	3 cut(s)	1076, 1091, 1157
EcoT38I	GRGCYC	3 cut(s)	770, 1157, 1249
EgeI	GGCGCC	1 cut(s)	1485
EheI	GGCGCC	1 cut(s)	1485
ErhI	CCWWGG	3 cut(s)	1076, 1091, 1157
Esp3I	CGTCTC	3 cut(s)	94, 213, 1422
FaeI	CATG	7 cut(s)	1095, 1116, 1161, 1277, 1294, 1378, 1483
FaqI	GGGAC	4 cut(s)	458, 587, 827, 1772
FatI	CATG	7 cut(s)	1091, 1112, 1157, 1273, 1290, 1374, 1479
FauI	CCCGC	2 cut(s)	510, 1749
FbaI	TGATCA	1 cut(s)	1537
FblI	GTMKAC	1 cut(s)	1505
FokI	GGATG	6 cut(s)	125, 994, 1036, 1130, 1182, 1459
FriOI	GRGCYC	3 cut(s)	770, 1157, 1249
FspBI	CTAG	2 cut(s)	156, 1766
GlaI	GCGC	9 cut(s)	57, 121, 370, 487, 725, 757, 873, 1263, 1485
GsaI	CCCAGC	3 cut(s)	915, 981, 1793
GsuI	CTGGAG	5 cut(s)	223, 649, 828, 1003, 1713
HaeII	RGCGCY	2 cut(s)	372, 1487
HaeIII	GGCC	7 cut(s)	180, 244, 342, 521, 737, 860, 1075
HapII	CCGG	8 cut(s)	123, 212, 339, 530, 624, 663, 693, 1064
HgaI	GACGC	6 cut(s)	8, 250, 455, 547, 553, 1404
HhaI	GCGC	9 cut(s)	58, 122, 371, 488, 726, 758, 874, 1264, 1486
Hin1I	GRCGYC	3 cut(s)	447, 564, 1484
Hin1II	CATG	7 cut(s)	1095, 1116, 1161, 1277, 1294, 1378, 1483
Hin6I	GCGC	9 cut(s)	56, 120, 369, 486, 724, 756, 872, 1262, 1484
HinP1I	GCGC	9 cut(s)	56, 120, 369, 486, 724, 756, 872, 1262, 1484
HincII	GTYRAC	1 cut(s)	1168
HindII	GTYRAC	1 cut(s)	1168
HindIII	AAGCTT	2 cut(s)	830, 1800
HinfI	GANTC	9 cut(s)	436, 491, 668, 1013, 1239, 1255, 1406, 1748, 1785
HpaII	CCGG	8 cut(s)	123, 212, 339, 530, 624, 663, 693, 1064
HphI	GGTGA	6 cut(s)	127, 541, 730, 943, 1162, 1539
Hpy166II	GTNNAC	7 cut(s)	163, 334, 1168, 1452, 1506, 1529, 1568
Hpy188I	TCNGA	9 cut(s)	445, 783, 796, 906, 1244, 1446, 1494, 1537, 1734
Hpy188III	TCNNGA	8 cut(s)	433, 475, 535, 693, 807, 1064, 1291, 1614
Hpy8I	GTNNAC	7 cut(s)	163, 334, 1168, 1452, 1506, 1529, 1568
HpyAV	CCTTC	6 cut(s)	450, 794, 928, 946, 1075, 1197
HpyCH4III	ACNGT	3 cut(s)	730, 1219, 1533
HpyCH4IV	ACGT	1 cut(s)	711
HpyCH4V	TGCA	5 cut(s)	1135, 1202, 1378, 1452, 1608
HpyF3I	CTNAG	8 cut(s)	15, 69, 75, 228, 365, 426, 1268, 1509
HpySE526I	ACGT	1 cut(s)	711
Hsp92I	GRCGYC	3 cut(s)	447, 564, 1484
Hsp92II	CATG	7 cut(s)	1095, 1116, 1161, 1277, 1294, 1378, 1483
HspAI	GCGC	9 cut(s)	56, 120, 369, 486, 724, 756, 872, 1262, 1484
KasI	GGCGCC	1 cut(s)	1483
Kpn2I	TCCGGA	2 cut(s)	692, 1063
KroI	GCCGGC	2 cut(s)	122, 662
KroNI	GCCGGC	2 cut(s)	124, 664
Ksp22I	TGATCA	1 cut(s)	1537
KspI	CCGCGG	1 cut(s)	595
Kzo9I	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
LmnI	GCTCC	6 cut(s)	321, 630, 765, 1252, 1307, 1382
Lsp1109I	GCAGC	4 cut(s)	76, 94, 1251, 1322
LweI	GCATC	3 cut(s)	642, 1187, 1666
MaeI	CTAG	2 cut(s)	156, 1766
MaeII	ACGT	1 cut(s)	711
MaeIII	GTNAC	3 cut(s)	20, 547, 1108
MalI	GATC	5 cut(s)	288, 431, 1087, 1395, 1539
MbiI	CCGCTC	1 cut(s)	508
MboI	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
MboII	GAAGA	5 cut(s)	209, 298, 1041, 1184, 1295
MflI	RGATCY	3 cut(s)	429, 1085, 1393
MhlI	GDGCHC	5 cut(s)	770, 1043, 1157, 1249, 1454
MluCI	AATT	5 cut(s)	275, 1286, 1315, 1459, 1541
Mly113I	GGCGCC	1 cut(s)	1484
MlyI	GAGTC	4 cut(s)	430, 662, 1007, 1794
MmeI	TCCRAC	2 cut(s)	468, 774
MreI	CGCCGGCG	1 cut(s)	662
MroI	TCCGGA	2 cut(s)	692, 1063
MroNI	GCCGGC	2 cut(s)	122, 662
MseI	TTAA	2 cut(s)	822, 1428
MspA1I	CMGCKG	3 cut(s)	594, 1744, 1793
MspI	CCGG	8 cut(s)	123, 212, 339, 530, 624, 663, 693, 1064
MspR9I	CCNGG	7 cut(s)	176, 241, 339, 518, 760, 1021, 1387
Mva1269I	GAATGC	1 cut(s)	1144
MvaI	CCWGG	6 cut(s)	176, 241, 518, 760, 1021, 1387
MvnI	CGCG	5 cut(s)	56, 261, 360, 377, 594
NaeI	GCCGGC	2 cut(s)	124, 664
NarI	GGCGCC	1 cut(s)	1484
NciI	CCSGG	1 cut(s)	339
NcoI	CCATGG	2 cut(s)	1091, 1157
NdeII	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
NgoMIV	GCCGGC	2 cut(s)	122, 662
NlaIII	CATG	7 cut(s)	1095, 1116, 1161, 1277, 1294, 1378, 1483
NlaIV	GGNNCC	3 cut(s)	1384, 1485, 1598
NmeAIII	GCCGAG	2 cut(s)	547, 886
NmuCI	GTSAC	2 cut(s)	20, 547
NspI	RCATGY	1 cut(s)	1378
PaeI	GCATGC	1 cut(s)	1378
PaeR7I	CTCGAG	1 cut(s)	1612
PagI	TCATGA	1 cut(s)	1290
PasI	CCCWGGG	1 cut(s)	175
PceI	AGGCCT	1 cut(s)	244
PcsI	WCGNNNNNNNCGW	2 cut(s)	93, 663
PctI	GAATGC	1 cut(s)	1144
PdiI	GCCGGC	2 cut(s)	124, 664
PfeI	GAWTC	5 cut(s)	491, 1239, 1255, 1406, 1748
PflFI	GACNNNGTC	2 cut(s)	302, 1172
PflMI	CCANNNNNTGG	1 cut(s)	108
PfoI	TCCNGGA	1 cut(s)	1019
PleI	GAGTC	4 cut(s)	430, 662, 1007, 1793
PluTI	GGCGCC	1 cut(s)	1487
PpsI	GAGTC	4 cut(s)	430, 662, 1007, 1793
Psp124BI	GAGCTC	2 cut(s)	770, 1249
Psp6I	CCWGG	6 cut(s)	174, 239, 516, 758, 1019, 1385
PspFI	CCCAGC	3 cut(s)	911, 977, 1789
PspGI	CCWGG	6 cut(s)	174, 239, 516, 758, 1019, 1385
PspN4I	GGNNCC	3 cut(s)	1384, 1485, 1598
PspPI	GGNCC	4 cut(s)	178, 532, 735, 1073
PstI	CTGCAG	1 cut(s)	1137
PsuI	RGATCY	3 cut(s)	429, 1085, 1393
PsyI	GACNNNGTC	2 cut(s)	302, 1172
PvuII	CAGCTG	1 cut(s)	1793
RsaI	GTAC	6 cut(s)	710, 1334, 1438, 1690, 1715, 1807
RsaNI	GTAC	6 cut(s)	709, 1333, 1437, 1689, 1714, 1806
SacI	GAGCTC	2 cut(s)	770, 1249
SacII	CCGCGG	1 cut(s)	595
SaqAI	TTAA	2 cut(s)	822, 1428
Sau3AI	GATC	5 cut(s)	286, 429, 1085, 1393, 1537
Sau96I	GGNCC	4 cut(s)	178, 532, 735, 1073
ScaI	AGTACT	1 cut(s)	1438
SchI	GAGTC	4 cut(s)	430, 662, 1007, 1794
ScrFI	CCNGG	7 cut(s)	176, 241, 339, 518, 760, 1021, 1387
SduI	GDGCHC	5 cut(s)	770, 1043, 1157, 1249, 1454
SfaNI	GCATC	3 cut(s)	642, 1187, 1666
SfcI	CTRYAG	1 cut(s)	1133
SfoI	GGCGCC	1 cut(s)	1485
Sfr274I	CTCGAG	1 cut(s)	1612
Sfr303I	CCGCGG	1 cut(s)	595
SgrAI	CRCCGGYG	1 cut(s)	662
SgrBI	CCGCGG	1 cut(s)	595
SinI	GGWCC	1 cut(s)	532
SlaI	CTCGAG	1 cut(s)	1612
SmlI	CTYRAG	1 cut(s)	1612
SmoI	CTYRAG	1 cut(s)	1612
SphI	GCATGC	1 cut(s)	1378
Sse9I	AATT	5 cut(s)	275, 1286, 1315, 1459, 1541
SseBI	AGGCCT	1 cut(s)	244
SspDI	GGCGCC	1 cut(s)	1483
SspMI	CTAG	2 cut(s)	156, 1766
SstI	GAGCTC	2 cut(s)	770, 1249
StuI	AGGCCT	1 cut(s)	244
StyD4I	CCNGG	7 cut(s)	174, 239, 337, 516, 758, 1019, 1385
StyI	CCWWGG	3 cut(s)	1076, 1091, 1157
TaaI	ACNGT	3 cut(s)	730, 1219, 1533
TaiI	ACGT	1 cut(s)	714
TaqI	TCGA	5 cut(s)	96, 186, 494, 1613, 1783
TasI	AATT	5 cut(s)	275, 1286, 1315, 1459, 1541
TatI	WGTACW	4 cut(s)	1332, 1436, 1688, 1805
TfiI	GAWTC	5 cut(s)	491, 1239, 1255, 1406, 1748
Tru1I	TTAA	2 cut(s)	822, 1428
Tru9I	TTAA	2 cut(s)	822, 1428
TscAI	CASTG	1 cut(s)	1257
TseFI	GTSAC	2 cut(s)	20, 547
TseI	GCWGC	4 cut(s)	64, 82, 1264, 1310
Tsp45I	GTSAC	2 cut(s)	20, 547
TspDTI	ATGAA	6 cut(s)	1134, 1184, 1202, 1279, 1446, 1734
TspGWI	ACGGA	5 cut(s)	395, 460, 535, 661, 1598
TspRI	CASTG	1 cut(s)	1257
Tth111I	GACNNNGTC	2 cut(s)	302, 1172
Van91I	CCANNNNNTGG	1 cut(s)	108
VneI	GTGCAC	1 cut(s)	1450
VpaK11BI	GGWCC	1 cut(s)	532
XagI	CCTNNNNNAGG	1 cut(s)	1302
XapI	RAATTY	2 cut(s)	275, 1286
XceI	RCATGY	1 cut(s)	1378
XhoI	CTCGAG	1 cut(s)	1612
XmiI	GTMKAC	1 cut(s)	1505
XspI	CTAG	2 cut(s)	156, 1766
ZrmI	AGTACT	1 cut(s)	1438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.