Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000804

Physical Location & Seq

Genomic Coordinates Reverse (-)

69382638 .. 69385485

Gene Structure 2848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG492900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGCCTCCCAATTCTCACCGTCACACTCGCTCTCGTTCTCACTCTCACTCTCACGCTCCTCCGCCGCCGCAGCTCGTCTCCATCGACCCCAAAATCTGGCGAGCCTGCGCCGGCAACTCCGTCACCATCCCCACTCTCCATTCTAGGGTTTACTACTTCCCCCAAGGCCACCTCGAACACTCCACATCCTCCTCCTCCGCTCCGGTTCTTCTCTCCCCTCTCGTCCTCTCCCAGCCCCTCATTCTCTGCCGCATCGCCGCCGTCCAGTTCCTCGCCGATCCCACCACCGACGAGGTCCTCGCCAAGCTCCTCCTCCATCCTGTTCACTCGGGACTCTCCCCTCACCACCGCGAACTGAGCGCCGCCGCCGCGGCGGAGGAGGAGCAGGAGGAGGACGACGGCGGTGATAGGGTGGTGTCGTTCGCTAAGATCTTGACTCCTTCCGATGCTAACAATGGCGGTGGTTTCTCTGTGCCCAGGTTTTGTGCTGACTCGATTTTCCCGCCGCTTAACTACCAGGCTGAGCCGCCGGTCCAGACGCTCTCCGTCACCGACCTGCACGGCGGCGTTTGGGACTTCCGCCACATCTACCGCGGGACTCCCCGGAGGCACTTGCTCACCACCGGCTGGAGCAAGTTCGTCAATCACAAGATGCTCGTCGCCGGCGACTCCGTGGTGTTTATGAGGAGCTCCAGAGGTGGGGAGATGTACGTCGGGGTAAGGCGGACCGTGAGGGCGAGCGCCGGCGGTGATTGCGGCAGGTGGAGCTCTCACATTGGGCTGAAGTCGGAGGAGGAACGTTCTGGAGGTGACGGGTTTAAGACGAGGCTTTCGGCAGAGGCTGTGGCGGAGGCTGCCGAGATGGCGGCGCAGGACATGCCGTTTGAGGTGGTGTATTATCCGAAAGCTGGGTGGGCCGACTTTGTGGTGAAGGCAGAGGTGGTGGAGAAGGCATTGAAGGTGTTTTGGACGGCTGGGATGAGAGTCAAGATGGCCATGGAGACTGATGACTCCTCCAGGATGACTTGGTTTCAGGGCACTCTGTCTTCGGCCTTTGTTCCGGAGAATGGGCCTTGGAAGGGATCCCCATGGCGTATGCTTCAGGTTACATGGGATGAACCTGAAGTTCTGCAGAATGCTAAGAGGGTGAGCCCATGGCAAGTTGACTTTGTTGCATCAACACCTTCTCTTCATACTGTACCTTCGCTTCATACTGTATTTCCCCCCACAAAGAGACTCCGAGCTCCACTGAATCCTGGGCTGCTGAGAAATGGAGAGGAAGAATTCATGATACCTATAACCGGAGCAGCTAATTCAACAATGGGGCAATTCAATGCTTCCTTGTTGAACTATAACATTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATTCTGTGCATCCAATGTATCTCATTTGTTAAATGAAAATTCTCCTCAGATGTGCACCTATAATTCCTTTGGCAACAACAACATGGTGCCAAGGTTAAAGAGGGTGTCAACTGAGTTGAACATTGGAAGTCCACAGTCTGATCAATTATCACCAGATAGCCAGAGTAGTCCACATTCCTTTGGCATGGAACTTGGTGGGAACCAAAACTGCAACTCGACAAAGGTCGGAAGAAGTTCTTTTCAACTCTTTGGTCAGACCATTCAACTTGAAGGTATTGATGCTGTTGGTTGCACTGGGGACGGTGGCAATATAGGGTATAATGAAACTGAACTTCTGAACAACCAACTGGATCTTTCTTATACCAAACTGCTTGAAAGGATTGATGTTCGAGTCTCAGCTGTTGAAGCTTGTACTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010927 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0022622 GO:0023052 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033036 GO:0033037 GO:0042221 GO:0042545 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048364 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0051716 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0085029 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

604

Amino Acids

66.12

Weight (kDa)

6.24

Isoelectric Point (pI)

54.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	141 - 243	1e-22	B3 DNA binding domain
BRWD_AD	PF25313	289 - 390	8.8e-08	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	308 - 391	9.9e-28	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77850 AT1G77850 ATMG00940
fragaria_vesca	FvH4_5g38640 FvH4_5g38681 FvH4_5g38690 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_6g33200
malus_domestica	MD00G1103900.v1.1 MD15G1359400.v1.1
prunus_persica	Prupe.1G507000_v2.0.a1
pyrus_communis	pycom08g14870 pycom15g32180
rosa_chinensis	RchiOBHm_Chr7g0240691
rosa_laevigata	RLG00000000626 RLG00000000646 RLG00000000656 RLG00000000659 RLG00000000668 RLG00000018665
rosa_multiflora	Rmu_co8133848.1_g000001 Rmu_co8172656.1_g000002 Rmu_sc0001483.1_g000002 Rmu_sc0001921.1_g000034 Rmu_sc0002517.1_g000004 Rmu_sc0004799.1_g000003 Rmu_sc0004799.1_g000004 Rmu_sc0011947.1_g000001 Rmu_sc0023480.1_g000003 Rmu_sc0030169.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121890 Rroxscaffold_3G00219660 Rroxscaffold_3G00219860 Rroxscaffold_3G00219880 Rroxscaffold_3G00236300
rosa_rugosa	Rorug02G0236900 Rorug02G0237000 Rorug07G0337600 Rorug07G0338300
rosa_samantha	Rh2AG295100 Rh7AG491700 Rh7AG492100 Rh7AG492900 Rh7BG464200 Rh7BG464600 Rh7BG464900 Rh7CG508200 Rh7CG508500 Rh7CG509100 Rh7CG509700 Rh7CG510000 Rh7CG511300 Rh7DG475700 Rh7DG476000 Rh7DG476700 Rh7DG477300 Rh7DG477600 Rh7DG478100
rosa_wichuraiana	Rw0G013480 Rw7G041210 Rw7G041230 Rw7G041320 Rw7G041490 Rw7G041510 Rw7G041550 Rw7G041690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	750
Acc36I	ACCTGC	2 cut(s)	564, 750
AccB1I	GGYRCC	1 cut(s)	1480
AccB7I	CCANNNNNTGG	2 cut(s)	96, 627
AccBSI	CCGCTC	1 cut(s)	200
AccII	CGCG	3 cut(s)	351, 371, 594
AccIII	TCCGGA	1 cut(s)	1060
AclI	AACGTT	1 cut(s)	799
AclWI	GGATC	4 cut(s)	272, 1077, 1090, 1752
AcoI	YGGCCR	1 cut(s)	993
AcsI	RAATTY	2 cut(s)	1283, 1432
AcuI	CTGAAG	3 cut(s)	803, 1085, 1143
AfaI	GTAC	3 cut(s)	710, 1200, 1807
AfiI	CCNNNNNNNGG	8 cut(s)	96, 145, 627, 699, 908, 1067, 1079, 1301
AjnI	CCWGG	5 cut(s)	476, 516, 1016, 1255, 1382
AluBI	AGCT	9 cut(s)	73, 307, 690, 768, 908, 1244, 1310, 1793, 1802
AluI	AGCT	9 cut(s)	73, 307, 690, 768, 908, 1244, 1310, 1793, 1802
Alw21I	GWGCWC	4 cut(s)	692, 770, 1246, 1451
Alw26I	GTCTC	4 cut(s)	82, 995, 1228, 1792
Alw44I	GTGCAC	1 cut(s)	1447
AlwI	GGATC	4 cut(s)	272, 1077, 1090, 1752
AlwNI	CAGNNNCTG	1 cut(s)	842
Ama87I	CYCGRG	1 cut(s)	328
Aor13HI	TCCGGA	1 cut(s)	1060
AoxI	GGCC	5 cut(s)	166, 915, 993, 1050, 1070
ApaLI	GTGCAC	1 cut(s)	1447
ApeKI	GCWGC	4 cut(s)	70, 854, 1261, 1307
ApoI	RAATTY	2 cut(s)	1283, 1432
ArsI	GACNNNNNNTTYG	4 cut(s)	814, 846, 866, 898
Asp700I	GAANNNNTTC	1 cut(s)	1627
AspLEI	GCGC	4 cut(s)	110, 362, 743, 871
AspS9I	GGNCC	5 cut(s)	295, 532, 726, 915, 1070
AsuC2I	CCSGG	1 cut(s)	604
AvaI	CYCGRG	1 cut(s)	328
AvaII	GGWCC	3 cut(s)	295, 532, 726
BaeGI	GKGCMC	3 cut(s)	477, 1040, 1451
BalI	TGGCCA	1 cut(s)	995
BamHI	GGATCC	1 cut(s)	1082
BanI	GGYRCC	1 cut(s)	1480
BanII	GRGCYC	4 cut(s)	692, 770, 1154, 1246
BarI	GAAGNNNNNNTAC	2 cut(s)	1191, 1223
BbsI	GAAGAC	1 cut(s)	1038
Bbv12I	GWGCWC	4 cut(s)	692, 770, 1246, 1451
BbvI	GCAGC	4 cut(s)	82, 841, 1248, 1319
BccI	CCATC	5 cut(s)	89, 134, 324, 856, 985
BceAI	ACGGC	5 cut(s)	245, 415, 577, 865, 987
BciT130I	CCWGG	5 cut(s)	478, 518, 1018, 1257, 1384
BclI	TGATCA	1 cut(s)	1534
BcnI	CCSGG	1 cut(s)	604
BcoDI	GTCTC	4 cut(s)	82, 995, 1228, 1792
BfaI	CTAG	1 cut(s)	144
BfmI	CTRYAG	1 cut(s)	1130
BfoI	RGCGCY	2 cut(s)	363, 744
BfuAI	ACCTGC	2 cut(s)	564, 750
BglI	GCCNNNNNGGC	2 cut(s)	371, 863
BglII	AGATCT	2 cut(s)	429, 1390
BlpI	GCTNAGC	1 cut(s)	522
Bme1390I	CCNGG	6 cut(s)	478, 518, 604, 1018, 1257, 1384
Bme18I	GGWCC	3 cut(s)	295, 532, 726
BmeT110I	CYCGRG	1 cut(s)	328
BmgT120I	GGNCC	5 cut(s)	295, 532, 726, 915, 1070
BmiI	GGNNCC	4 cut(s)	1084, 1381, 1482, 1595
BmrFI	CCNGG	6 cut(s)	478, 518, 604, 1018, 1257, 1384
BmrI	ACTGGG	1 cut(s)	1698
BmsI	GCATC	6 cut(s)	261, 436, 642, 1184, 1412, 1663
BmuI	ACTGGG	1 cut(s)	1698
BoxI	GACNNNNGTC	1 cut(s)	1616
BpiI	GAAGAC	1 cut(s)	1038
BpmI	CTGGAG	4 cut(s)	649, 676, 825, 1000
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuMI	CCSGG	1 cut(s)	604
BsaWI	WCCGGW	3 cut(s)	202, 1060, 1301
Bsc4I	CCNNNNNNNGG	8 cut(s)	96, 145, 627, 699, 908, 1067, 1079, 1301
Bse118I	RCCGGY	5 cut(s)	110, 529, 623, 662, 743
Bse1I	ACTGG	3 cut(s)	265, 1693, 1746
BseAI	TCCGGA	1 cut(s)	1060
BseBI	CCWGG	5 cut(s)	478, 518, 1018, 1257, 1384
BseGI	GGATG	7 cut(s)	126, 185, 316, 984, 1026, 1120, 1403
BseLI	CCNNNNNNNGG	8 cut(s)	96, 145, 627, 699, 908, 1067, 1079, 1301
BseMII	CTCAG	6 cut(s)	347, 513, 1256, 1454, 1497, 1803
BseNI	ACTGG	3 cut(s)	265, 1693, 1746
BseSI	GKGCMC	3 cut(s)	477, 1040, 1451
BseXI	GCAGC	4 cut(s)	82, 841, 1248, 1319
BseYI	CCCAGC	3 cut(s)	231, 908, 974
BsgI	GTGCAG	1 cut(s)	542
Bsh1236I	CGCG	3 cut(s)	351, 371, 594
BshFI	GGCC	5 cut(s)	168, 917, 995, 1052, 1072
BshNI	GGYRCC	1 cut(s)	1480
BsiHKAI	GWGCWC	4 cut(s)	692, 770, 1246, 1451
BsiHKCI	CYCGRG	1 cut(s)	328
BsiSI	CCGG	9 cut(s)	111, 203, 530, 604, 624, 663, 744, 1061, 1302
BslFI	GGGAC	4 cut(s)	345, 587, 610, 1706
BslI	CCNNNNNNNGG	8 cut(s)	96, 145, 627, 699, 908, 1067, 1079, 1301
BsmAI	GTCTC	4 cut(s)	82, 995, 1228, 1792
BsmBI	CGTCTC	1 cut(s)	82
BsmFI	GGGAC	4 cut(s)	345, 587, 610, 1706
BsmI	GAATGC	1 cut(s)	1141
BsnI	GGCC	5 cut(s)	168, 917, 995, 1052, 1072
BsoBI	CYCGRG	1 cut(s)	328
Bsp1286I	GDGCHC	7 cut(s)	477, 692, 770, 1040, 1154, 1246, 1451
Bsp13I	TCCGGA	1 cut(s)	1060
Bsp143I	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
Bsp1720I	GCTNAGC	1 cut(s)	522
Bsp19I	CCATGG	3 cut(s)	996, 1088, 1154
BspANI	GGCC	5 cut(s)	168, 917, 995, 1052, 1072
BspCNI	CTCAG	6 cut(s)	348, 514, 1257, 1453, 1498, 1802
BspEI	TCCGGA	1 cut(s)	1060
BspFNI	CGCG	3 cut(s)	351, 371, 594
BspHI	TCATGA	1 cut(s)	1287
BspLI	GGNNCC	4 cut(s)	1084, 1381, 1482, 1595
BspMAI	CTGCAG	1 cut(s)	1134
BspMI	ACCTGC	2 cut(s)	564, 750
BspPI	GGATC	4 cut(s)	272, 1077, 1090, 1752
BspT107I	GGYRCC	1 cut(s)	1480
BsrBI	CCGCTC	1 cut(s)	200
BsrFI	RCCGGY	5 cut(s)	110, 529, 623, 662, 743
BsrI	ACTGG	3 cut(s)	265, 1693, 1746
BssAI	RCCGGY	5 cut(s)	110, 529, 623, 662, 743
BssMI	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
BssT1I	CCWWGG	6 cut(s)	163, 996, 1073, 1088, 1154, 1484
Bst2UI	CCWGG	5 cut(s)	478, 518, 1018, 1257, 1384
Bst4CI	ACNGT	6 cut(s)	20, 730, 1198, 1216, 1530, 1697
Bst6I	CTCTTC	1 cut(s)	1194
BstAPI	GCANNNNNTGC	1 cut(s)	877
BstC8I	GCNNGC	8 cut(s)	102, 106, 112, 664, 739, 745, 1369, 1373
BstDEI	CTNAG	8 cut(s)	356, 426, 522, 1140, 1265, 1440, 1506, 1789
BstDSI	CCRYGG	6 cut(s)	369, 592, 672, 996, 1088, 1154
BstF5I	GGATG	7 cut(s)	126, 185, 316, 984, 1026, 1120, 1403
BstFNI	CGCG	3 cut(s)	351, 371, 594
BstH2I	RGCGCY	2 cut(s)	363, 744
BstHHI	GCGC	4 cut(s)	110, 362, 743, 871
BstKTI	GATC	6 cut(s)	280, 432, 1085, 1393, 1537, 1747
BstMAI	GTCTC	4 cut(s)	82, 995, 1228, 1792
BstMBI	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
BstNI	CCWGG	5 cut(s)	478, 518, 1018, 1257, 1384
BstNSI	RCATGY	2 cut(s)	880, 1375
BstPAI	GACNNNNGTC	1 cut(s)	1616
BstSCI	CCNGG	6 cut(s)	476, 516, 602, 1016, 1255, 1382
BstSFI	CTRYAG	1 cut(s)	1130
BstSLI	GKGCMC	3 cut(s)	477, 1040, 1451
BstUI	CGCG	3 cut(s)	351, 371, 594
BstV1I	GCAGC	4 cut(s)	82, 841, 1248, 1319
BstV2I	GAAGAC	1 cut(s)	1038
BstX2I	RGATCY	4 cut(s)	429, 1082, 1390, 1744
BstYI	RGATCY	4 cut(s)	429, 1082, 1390, 1744
BsuRI	GGCC	5 cut(s)	168, 917, 995, 1052, 1072
BtgI	CCRYGG	6 cut(s)	369, 592, 672, 996, 1088, 1154
BtgZI	GCGATG	1 cut(s)	238
BtsCI	GGATG	7 cut(s)	126, 185, 316, 984, 1026, 1120, 1403
BtsIMutI	CAGTG	2 cut(s)	1247, 1686
BveI	ACCTGC	2 cut(s)	564, 750
Cac8I	GCNNGC	8 cut(s)	102, 106, 112, 664, 739, 745, 1369, 1373
CaiI	CAGNNNCTG	1 cut(s)	842
CciI	TCATGA	1 cut(s)	1287
CfoI	GCGC	4 cut(s)	110, 362, 743, 871
Cfr10I	RCCGGY	5 cut(s)	110, 529, 623, 662, 743
Cfr13I	GGNCC	5 cut(s)	295, 532, 726, 915, 1070
Cfr42I	CCGCGG	2 cut(s)	372, 595
CpoI	CGGWCCG	1 cut(s)	726
CseI	GACGC	1 cut(s)	547
Csp6I	GTAC	3 cut(s)	709, 1199, 1806
CspCI	CAANNNNNGTGG	2 cut(s)	442, 477
CspI	CGGWCCG	1 cut(s)	726
CviAII	CATG	9 cut(s)	877, 997, 1089, 1110, 1155, 1288, 1372, 1477, 1579
CviQI	GTAC	3 cut(s)	709, 1199, 1806
DdeI	CTNAG	8 cut(s)	356, 426, 522, 1140, 1265, 1440, 1506, 1789
DpnI	GATC	6 cut(s)	279, 431, 1084, 1392, 1536, 1746
DpnII	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
EaeI	YGGCCR	1 cut(s)	993
Eam1104I	CTCTTC	1 cut(s)	1194
EarI	CTCTTC	1 cut(s)	1194
EciI	GGCGGA	5 cut(s)	51, 389, 569, 739, 863
Ecl136II	GAGCTC	3 cut(s)	690, 768, 1244
Eco130I	CCWWGG	6 cut(s)	163, 996, 1073, 1088, 1154, 1484
Eco24I	GRGCYC	4 cut(s)	692, 770, 1154, 1246
Eco47I	GGWCC	3 cut(s)	295, 532, 726
Eco53kI	GAGCTC	3 cut(s)	690, 768, 1244
Eco57I	CTGAAG	3 cut(s)	803, 1085, 1143
Eco88I	CYCGRG	1 cut(s)	328
EcoICRI	GAGCTC	3 cut(s)	690, 768, 1244
EcoO109I	RGGNCCY	1 cut(s)	295
EcoRI	GAATTC	1 cut(s)	1283
EcoRII	CCWGG	5 cut(s)	476, 516, 1016, 1255, 1382
EcoT14I	CCWWGG	6 cut(s)	163, 996, 1073, 1088, 1154, 1484
EcoT38I	GRGCYC	4 cut(s)	692, 770, 1154, 1246
ErhI	CCWWGG	6 cut(s)	163, 996, 1073, 1088, 1154, 1484
Esp3I	CGTCTC	1 cut(s)	82
FaeI	CATG	9 cut(s)	880, 1000, 1092, 1113, 1158, 1291, 1375, 1480, 1582
FalI	AAGNNNNNCTT	2 cut(s)	1615, 1647
FaqI	GGGAC	4 cut(s)	345, 587, 610, 1706
FatI	CATG	9 cut(s)	876, 996, 1088, 1109, 1154, 1287, 1371, 1476, 1578
FauI	CCCGC	2 cut(s)	510, 587
FbaI	TGATCA	1 cut(s)	1534
FokI	GGATG	7 cut(s)	113, 172, 303, 991, 1033, 1127, 1390
FriOI	GRGCYC	4 cut(s)	692, 770, 1154, 1246
FspBI	CTAG	1 cut(s)	144
GlaI	GCGC	4 cut(s)	109, 361, 742, 870
GsaI	CCCAGC	3 cut(s)	235, 912, 978
GsuI	CTGGAG	4 cut(s)	649, 676, 825, 1000
HaeII	RGCGCY	2 cut(s)	363, 744
HaeIII	GGCC	5 cut(s)	168, 917, 995, 1052, 1072
HapII	CCGG	9 cut(s)	111, 203, 530, 604, 624, 663, 744, 1061, 1302
HgaI	GACGC	1 cut(s)	547
HhaI	GCGC	4 cut(s)	110, 362, 743, 871
Hin1II	CATG	9 cut(s)	880, 1000, 1092, 1113, 1158, 1291, 1375, 1480, 1582
Hin6I	GCGC	4 cut(s)	108, 360, 741, 869
HinP1I	GCGC	4 cut(s)	108, 360, 741, 869
HincII	GTYRAC	2 cut(s)	1165, 1503
HindII	GTYRAC	2 cut(s)	1165, 1503
HindIII	AAGCTT	1 cut(s)	1800
HpaII	CCGG	9 cut(s)	111, 203, 530, 604, 624, 663, 744, 1061, 1302
Hpy166II	GTNNAC	7 cut(s)	151, 325, 1165, 1449, 1503, 1526, 1565
Hpy188I	TCNGA	9 cut(s)	445, 790, 903, 1241, 1443, 1534, 1622, 1650, 1731
Hpy188III	TCNNGA	8 cut(s)	330, 433, 535, 693, 804, 988, 1061, 1288
Hpy8I	GTNNAC	7 cut(s)	151, 325, 1165, 1449, 1503, 1526, 1565
Hpy99I	CGWCG	4 cut(s)	293, 401, 662, 716
HpyAV	CCTTC	8 cut(s)	450, 925, 943, 952, 1072, 1194, 1212, 1658
HpyCH4III	ACNGT	6 cut(s)	20, 730, 1198, 1216, 1530, 1697
HpyCH4IV	ACGT	2 cut(s)	711, 799
HpyCH4V	TGCA	8 cut(s)	559, 1132, 1175, 1375, 1403, 1449, 1605, 1686
HpyF3I	CTNAG	8 cut(s)	356, 426, 522, 1140, 1265, 1440, 1506, 1789
HpySE526I	ACGT	2 cut(s)	711, 799
Hsp92II	CATG	9 cut(s)	880, 1000, 1092, 1113, 1158, 1291, 1375, 1480, 1582
HspAI	GCGC	4 cut(s)	108, 360, 741, 869
Kpn2I	TCCGGA	1 cut(s)	1060
KroI	GCCGGC	3 cut(s)	110, 662, 743
KroNI	GCCGGC	3 cut(s)	112, 664, 745
Ksp22I	TGATCA	1 cut(s)	1534
KspI	CCGCGG	2 cut(s)	372, 595
Kzo9I	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
Lsp1109I	GCAGC	4 cut(s)	82, 841, 1248, 1319
LweI	GCATC	6 cut(s)	261, 436, 642, 1184, 1412, 1663
MaeI	CTAG	1 cut(s)	144
MaeII	ACGT	2 cut(s)	711, 799
MaeIII	GTNAC	5 cut(s)	20, 121, 547, 809, 1105
MalI	GATC	6 cut(s)	279, 431, 1084, 1392, 1536, 1746
MbiI	CCGCTC	1 cut(s)	200
MboI	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
MboII	GAAGA	5 cut(s)	200, 1038, 1181, 1292, 1635
MflI	RGATCY	4 cut(s)	429, 1082, 1390, 1744
MhlI	GDGCHC	7 cut(s)	477, 692, 770, 1040, 1154, 1246, 1451
MlsI	TGGCCA	1 cut(s)	995
MluCI	AATT	7 cut(s)	10, 1283, 1312, 1328, 1432, 1456, 1538
MluNI	TGGCCA	1 cut(s)	995
MlyI	GAGTC	9 cut(s)	327, 430, 485, 592, 662, 993, 1004, 1230, 1794
MmeI	TCCRAC	2 cut(s)	768, 1600
Mox20I	TGGCCA	1 cut(s)	995
MreI	CGCCGGCG	2 cut(s)	662, 743
MroI	TCCGGA	1 cut(s)	1060
MroNI	GCCGGC	3 cut(s)	110, 662, 743
MroXI	GAANNNNTTC	1 cut(s)	1627
MscI	TGGCCA	1 cut(s)	995
MseI	TTAA	4 cut(s)	510, 819, 1424, 1490
Msp20I	TGGCCA	1 cut(s)	995
MspA1I	CMGCKG	3 cut(s)	371, 594, 1793
MspI	CCGG	9 cut(s)	111, 203, 530, 604, 624, 663, 744, 1061, 1302
MspR9I	CCNGG	6 cut(s)	478, 518, 604, 1018, 1257, 1384
Mva1269I	GAATGC	1 cut(s)	1141
MvaI	CCWGG	5 cut(s)	478, 518, 1018, 1257, 1384
MvnI	CGCG	3 cut(s)	351, 371, 594
NaeI	GCCGGC	3 cut(s)	112, 664, 745
NciI	CCSGG	1 cut(s)	604
NcoI	CCATGG	3 cut(s)	996, 1088, 1154
NdeII	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
NgoMIV	GCCGGC	3 cut(s)	110, 662, 743
NlaIII	CATG	9 cut(s)	880, 1000, 1092, 1113, 1158, 1291, 1375, 1480, 1582
NlaIV	GGNNCC	4 cut(s)	1084, 1381, 1482, 1595
NmeAIII	GCCGAG	1 cut(s)	883
NmuCI	GTSAC	4 cut(s)	20, 121, 547, 809
NspI	RCATGY	2 cut(s)	880, 1375
PaeI	GCATGC	1 cut(s)	1375
PagI	TCATGA	1 cut(s)	1287
PaqCI	CACCTGC	1 cut(s)	750
PcsI	WCGNNNNNNNCGW	2 cut(s)	81, 663
PctI	GAATGC	1 cut(s)	1141
PdiI	GCCGGC	3 cut(s)	112, 664, 745
PdmI	GAANNNNTTC	1 cut(s)	1627
PfeI	GAWTC	1 cut(s)	1252
PflFI	GACNNNGTC	1 cut(s)	293
PflMI	CCANNNNNTGG	2 cut(s)	96, 627
PfoI	TCCNGGA	1 cut(s)	1016
PleI	GAGTC	9 cut(s)	327, 430, 485, 592, 662, 992, 1004, 1230, 1793
PpsI	GAGTC	9 cut(s)	327, 430, 485, 592, 662, 992, 1004, 1230, 1793
PpuMI	RGGWCCY	1 cut(s)	295
PshAI	GACNNNNGTC	1 cut(s)	1616
Psp124BI	GAGCTC	3 cut(s)	692, 770, 1246
Psp1406I	AACGTT	1 cut(s)	799
Psp5II	RGGWCCY	1 cut(s)	295
Psp6I	CCWGG	5 cut(s)	476, 516, 1016, 1255, 1382
PspFI	CCCAGC	3 cut(s)	231, 908, 974
PspGI	CCWGG	5 cut(s)	476, 516, 1016, 1255, 1382
PspN4I	GGNNCC	4 cut(s)	1084, 1381, 1482, 1595
PspPI	GGNCC	5 cut(s)	295, 532, 726, 915, 1070
PspPPI	RGGWCCY	1 cut(s)	295
PstI	CTGCAG	1 cut(s)	1134
PstNI	CAGNNNCTG	1 cut(s)	842
PsuI	RGATCY	4 cut(s)	429, 1082, 1390, 1744
PsyI	GACNNNGTC	1 cut(s)	293
PvuII	CAGCTG	1 cut(s)	1793
RsaI	GTAC	3 cut(s)	710, 1200, 1807
RsaNI	GTAC	3 cut(s)	709, 1199, 1806
Rsr2I	CGGWCCG	1 cut(s)	726
RsrII	CGGWCCG	1 cut(s)	726
SacI	GAGCTC	3 cut(s)	692, 770, 1246
SacII	CCGCGG	2 cut(s)	372, 595
SaqAI	TTAA	4 cut(s)	510, 819, 1424, 1490
Sau3AI	GATC	6 cut(s)	277, 429, 1082, 1390, 1534, 1744
Sau96I	GGNCC	5 cut(s)	295, 532, 726, 915, 1070
SchI	GAGTC	9 cut(s)	327, 430, 485, 592, 662, 993, 1004, 1230, 1794
ScrFI	CCNGG	6 cut(s)	478, 518, 604, 1018, 1257, 1384
SduI	GDGCHC	7 cut(s)	477, 692, 770, 1040, 1154, 1246, 1451
SfaNI	GCATC	6 cut(s)	261, 436, 642, 1184, 1412, 1663
SfcI	CTRYAG	1 cut(s)	1130
Sfr303I	CCGCGG	2 cut(s)	372, 595
SgrAI	CRCCGGYG	2 cut(s)	662, 743
SgrBI	CCGCGG	2 cut(s)	372, 595
SinI	GGWCC	3 cut(s)	295, 532, 726
SphI	GCATGC	1 cut(s)	1375
Sse9I	AATT	7 cut(s)	10, 1283, 1312, 1328, 1432, 1456, 1538
SspMI	CTAG	1 cut(s)	144
SstI	GAGCTC	3 cut(s)	692, 770, 1246
StyD4I	CCNGG	6 cut(s)	476, 516, 602, 1016, 1255, 1382
StyI	CCWWGG	6 cut(s)	163, 996, 1073, 1088, 1154, 1484
TaaI	ACNGT	6 cut(s)	20, 730, 1198, 1216, 1530, 1697
TaiI	ACGT	2 cut(s)	714, 802
TaqI	TCGA	5 cut(s)	84, 174, 494, 1610, 1783
TasI	AATT	7 cut(s)	10, 1283, 1312, 1328, 1432, 1456, 1538
TatI	WGTACW	1 cut(s)	1805
TfiI	GAWTC	1 cut(s)	1252
Tru1I	TTAA	4 cut(s)	510, 819, 1424, 1490
Tru9I	TTAA	4 cut(s)	510, 819, 1424, 1490
TscAI	CASTG	2 cut(s)	1254, 1693
TseFI	GTSAC	4 cut(s)	20, 121, 547, 809
TseI	GCWGC	4 cut(s)	70, 854, 1261, 1307
Tsp45I	GTSAC	4 cut(s)	20, 121, 547, 809
TspDTI	ATGAA	6 cut(s)	1131, 1181, 1199, 1276, 1443, 1731
TspGWI	ACGGA	3 cut(s)	109, 535, 661
TspRI	CASTG	2 cut(s)	1254, 1693
Tth111I	GACNNNGTC	1 cut(s)	293
Van91I	CCANNNNNTGG	2 cut(s)	96, 627
VneI	GTGCAC	1 cut(s)	1447
VpaK11BI	GGWCC	3 cut(s)	295, 532, 726
XapI	RAATTY	2 cut(s)	1283, 1432
XceI	RCATGY	2 cut(s)	880, 1375
XmnI	GAANNNNTTC	1 cut(s)	1627
XspI	CTAG	1 cut(s)	144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.