Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0000804

Physical Location & Seq

Genomic Coordinates Forward (+)

31073701 .. 31076344

Gene Structure 2644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g32180.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGCCTCCGCCTCACCGTCGTTCGATCGACCCCAAAATCTGGCGCGCCTGCGCCGGAAACTCCGTCCAAATCCCCACCCTCAACTCTAGGGTTTACTACTTCCCTCAGGGCCACCTCGAGCAATCCTCCGCCTCCTCCGCTGCGCCTATCCTCCTCTCCCCTCTCCTCCTCTCCAAGCCTCTCATTCTCTGCCGGATCTCCGACCTCCACTTCCTCCCTGACCCCACCACCGACGAGGTCTTCGCCAAGCTGCTTCTCGTCCCAATCCCCAATGAGTTCCCCAACGTCAAGCCGCCCAATGGCGACGAACTCAACGCCGACGATAATGGGGACTTGGAACAACAGGATGACAGAGTCTTTTCGTTCGCGAAGATACTGACGCCTTCGGATGCTCACAATGGCGGTGGATTCTCTGTTCCGAAGTTCTGCGCGGACTCCATCTTTCCTCCGCTTAACTACCAGGCCGAGCCGCCGGTCCAGGCGCTCTTCCTCACCGACCTCCACGGCGTCGTTTGGGAATTCCGGCACATATACAGGGGTACTCCGAGACGGCACTTGCTCACCACTGGCTGGAGCAAGTTCGTCAACCACAAGATGCTCGTCGCCGGTGACTCCGTCGTCTTCATGAGGAACGGGAGGGGAGAGATGTTCATCGGCGTCCGTCGCGCAGTCAGGCCCTGCGCCAGGTGGAACTATCACATTGGAGGCGGACCGACGAACTCGATGAGGCTGAAGACAGAGGATCAGGACTGTTCTGGAAGGAAGGTAATGTCCGCGGAGGCCGTGGCCGAAGTGGCGGAGATGGCGGCGGAGGGGAAGCCGTTTGAGGTGGTGTATTATCCAAAAGCGGGGTGGTGGGACTTTGTGGTGAAGTCTGAGGTGGTGGAGAAGGCATTGAAGGTGTTTTGGACGGCTGGGATGAGAGTGAAGTTGGCTATGGAGACGGAGGACTCGTCCCGGATGACTTGGTTTCAGGGCACTCTGTCGACGGCTTCGGTACCGGACAATGGACCTTGGCAGGGCTCACCCTGGCGCATGCTTCAGGTTACATGGGATGAACCTGAAGCTCTGCACAATGCTAAGAGGGTGAGCCCGTGGCAAGTCGAAATTGTTGGATCAACACCTACAATTCAGACAACGTTTTGCCCCACAAAGAGATTCAGAGCTCCTTTGAGTCATGGGCTGTTGATCAATGCAGAGGAAGAATTCTTCTTTCCTATGGCAGGAGCAGCTAATTCAGCAATGGGGCCATTTAGTGCATCCTTGTTGAACTACAATTTTCCCGCGGGCATGCAGGGAGCCAGGCAAGATACATTCTCTGTATCTAATCTATCCCACTTGTTAAGTGAAAACACTCCTCAGGCGTGCACTTACAATTCCTTTGGCAACAATGAGGTGCCAAAGCTGAAGAGGGTATGTACTGAGTTGAACATTGGTAGTTCACAGTCTGATGAATTGTCATCAGATAGCCAGAGTAGTGTGCCATCCTTTGGGATGGAACTTGATGGAAACCGGTTGCAGACAAAGGTTGGCACAAGTTCCTTTCAGCTGTTTGGTAAGATCATTCATACAAGCCAGTCTGCTGAAGGTGGTTCTGATGATGTTGGTTGCACCGAGGACAGTGGCAACAAAGAGTACAATGTAGCAGACGGAGGGCACAACCAACTGGATCTTAATTTTACCGAACTTCTTGAAAGGATTGATATTAAATGTCAAAAAACCTCAGCTGTTGATTCTTGTACTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010927 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0022622 GO:0023052 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033036 GO:0033037 GO:0042221 GO:0042545 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048364 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0051716 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0085029 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

583

Amino Acids

64.29

Weight (kDa)

5.67

Isoelectric Point (pI)

49.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77850 AT1G77850 ATMG00940
fragaria_vesca	FvH4_5g38640 FvH4_5g38681 FvH4_5g38690 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_6g33200
malus_domestica	MD00G1103900.v1.1 MD15G1359400.v1.1
prunus_persica	Prupe.1G507000_v2.0.a1
pyrus_communis	pycom08g14870 pycom15g32180
rosa_chinensis	RchiOBHm_Chr7g0240691
rosa_laevigata	RLG00000000626 RLG00000000646 RLG00000000656 RLG00000000659 RLG00000000668 RLG00000018665
rosa_multiflora	Rmu_co8133848.1_g000001 Rmu_co8172656.1_g000002 Rmu_sc0001483.1_g000002 Rmu_sc0001921.1_g000034 Rmu_sc0002517.1_g000004 Rmu_sc0004799.1_g000003 Rmu_sc0004799.1_g000004 Rmu_sc0011947.1_g000001 Rmu_sc0023480.1_g000003 Rmu_sc0030169.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121890 Rroxscaffold_3G00219660 Rroxscaffold_3G00219860 Rroxscaffold_3G00219880 Rroxscaffold_3G00236300
rosa_rugosa	Rorug02G0236900 Rorug02G0237000 Rorug07G0337600 Rorug07G0338300
rosa_samantha	Rh2AG295100 Rh7AG491700 Rh7AG492100 Rh7AG492900 Rh7BG464200 Rh7BG464600 Rh7BG464900 Rh7CG508200 Rh7CG508500 Rh7CG509100 Rh7CG509700 Rh7CG510000 Rh7CG511300 Rh7DG475700 Rh7DG476000 Rh7DG476700 Rh7DG477300 Rh7DG477600 Rh7DG478100
rosa_wichuraiana	Rw0G013480 Rw7G041210 Rw7G041230 Rw7G041320 Rw7G041490 Rw7G041510 Rw7G041550 Rw7G041690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	617
Acc65I	GGTACC	1 cut(s)	997
AccB1I	GGYRCC	2 cut(s)	997, 1396
AccB7I	CCANNNNNTGG	3 cut(s)	39, 570, 1490
AccI	GTMKAC	1 cut(s)	986
AccII	CGCG	6 cut(s)	45, 368, 431, 666, 776, 1286
AclI	AACGTT	1 cut(s)	1139
AclWI	GGATC	4 cut(s)	203, 750, 1123, 1677
AcoI	YGGCCR	1 cut(s)	786
AcsI	RAATTY	2 cut(s)	518, 1205
AcuI	CTGAAG	5 cut(s)	752, 1025, 1083, 1427, 1605
AcyI	GRCGYC	3 cut(s)	380, 507, 657
AfaI	GTAC	5 cut(s)	541, 999, 1420, 1637, 1741
AfiI	CCNNNNNNNGG	9 cut(s)	39, 299, 570, 684, 848, 1007, 1019, 1223, 1490
AgeI	ACCGGT	1 cut(s)	1512
AgsI	TTSAA	4 cut(s)	898, 1270, 1429, 1694
AjnI	CCWGG	5 cut(s)	459, 477, 683, 1028, 1301
AloI	GAACNNNNNNTCC	2 cut(s)	399, 431
AluBI	AGCT	7 cut(s)	250, 1067, 1166, 1232, 1405, 1549, 1727
AluI	AGCT	7 cut(s)	250, 1067, 1166, 1232, 1405, 1549, 1727
Alw21I	GWGCWC	2 cut(s)	1168, 1370
Alw26I	GTCTC	2 cut(s)	541, 935
Alw44I	GTGCAC	1 cut(s)	1366
AlwI	GGATC	4 cut(s)	203, 750, 1123, 1677
AlwNI	CAGNNNCTG	1 cut(s)	678
Ama87I	CYCGRG	1 cut(s)	116
AoxI	GGCC	6 cut(s)	109, 462, 674, 780, 786, 1247
ApaLI	GTGCAC	1 cut(s)	1366
ApeKI	GCWGC	3 cut(s)	140, 250, 1229
ApoI	RAATTY	2 cut(s)	518, 1205
ArsI	GACNNNNNNTTYG	2 cut(s)	224, 256
AscI	GGCGCGCC	1 cut(s)	43
AsiGI	ACCGGT	1 cut(s)	1512
Asp718I	GGTACC	1 cut(s)	997
AspLEI	GCGC	9 cut(s)	45, 47, 53, 145, 431, 484, 668, 683, 1035
AspS9I	GGNCC	6 cut(s)	109, 475, 675, 710, 1010, 1247
AsuC2I	CCSGG	1 cut(s)	958
AsuHPI	GGTGA	7 cut(s)	5, 484, 553, 620, 880, 1017, 1099
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	3 cut(s)	475, 710, 1010
AxyI	CCTNAGG	2 cut(s)	105, 1359
BaeGI	GKGCMC	3 cut(s)	980, 1370, 1659
BanI	GGYRCC	2 cut(s)	997, 1396
BanII	GRGCYC	3 cut(s)	1025, 1094, 1168
BbsI	GAAGAC	3 cut(s)	232, 613, 740
Bbv12I	GWGCWC	2 cut(s)	1168, 1370
BbvCI	CCTCAGC	1 cut(s)	1723
BbvI	GCAGC	3 cut(s)	127, 237, 1241
BccI	CCATC	5 cut(s)	446, 796, 1489, 1492, 1499
BceAI	ACGGC	6 cut(s)	520, 566, 767, 805, 927, 1005
BciT130I	CCWGG	5 cut(s)	461, 479, 685, 1030, 1303
BclI	TGATCA	1 cut(s)	1188
BcnI	CCSGG	1 cut(s)	958
BcoDI	GTCTC	2 cut(s)	541, 935
BfaI	CTAG	1 cut(s)	87
BfoI	RGCGCY	1 cut(s)	485
BglI	GCCNNNNNGGC	1 cut(s)	794
BisI	GCNGC	6 cut(s)	141, 251, 293, 470, 807, 1230
BlsI	GCNGC	6 cut(s)	142, 252, 294, 471, 808, 1231
Bme1390I	CCNGG	6 cut(s)	461, 479, 685, 958, 1030, 1303
Bme18I	GGWCC	3 cut(s)	475, 710, 1010
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	6 cut(s)	109, 475, 675, 710, 1010, 1247
BmiI	GGNNCC	4 cut(s)	999, 1248, 1300, 1398
BmrFI	CCNGG	6 cut(s)	461, 479, 685, 958, 1030, 1303
BmsI	GCATC	3 cut(s)	379, 585, 1268
BpiI	GAAGAC	3 cut(s)	232, 613, 740
BplI	GAGNNNNNCTC	2 cut(s)	110, 142
BpmI	CTGGAG	1 cut(s)	592
Bpu10I	CCTNAGC	1 cut(s)	1723
BpuMI	CCSGG	1 cut(s)	958
BsaBI	GATNNNNATC	1 cut(s)	650
BsaHI	GRCGYC	3 cut(s)	380, 507, 657
BsaJI	CCNNGG	8 cut(s)	502, 774, 783, 1013, 1028, 1094, 1284, 1614
BsaWI	WCCGGW	2 cut(s)	1000, 1512
BsaXI	ACNNNNNCTCC	2 cut(s)	938, 968
Bsc4I	CCNNNNNNNGG	9 cut(s)	39, 299, 570, 684, 848, 1007, 1019, 1223, 1490
Bse118I	RCCGGY	3 cut(s)	472, 605, 1512
Bse1I	ACTGG	3 cut(s)	571, 1576, 1671
Bse21I	CCTNAGG	2 cut(s)	105, 1359
Bse3DI	GCAATG	1 cut(s)	1248
Bse8I	GATNNNNATC	1 cut(s)	650
BseBI	CCWGG	5 cut(s)	461, 479, 685, 1030, 1303
BseDI	CCNNGG	8 cut(s)	502, 774, 783, 1013, 1028, 1094, 1284, 1614
BseGI	GGATG	8 cut(s)	352, 394, 924, 966, 1060, 1259, 1484, 1500
BseJI	GATNNNNATC	1 cut(s)	650
BseLI	CCNNNNNNNGG	9 cut(s)	39, 299, 570, 684, 848, 1007, 1019, 1223, 1490
BseMI	GCAATG	1 cut(s)	1248
BseMII	CTCAG	5 cut(s)	119, 867, 1373, 1413, 1737
BseNI	ACTGG	3 cut(s)	571, 1576, 1671
BsePI	GCGCGC	1 cut(s)	43
BseRI	GAGGAG	5 cut(s)	124, 143, 155, 158, 1347
BseSI	GKGCMC	3 cut(s)	980, 1370, 1659
BseXI	GCAGC	3 cut(s)	127, 237, 1241
BseYI	CCCAGC	1 cut(s)	914
BsgI	GTGCAG	1 cut(s)	1055
Bsh1236I	CGCG	6 cut(s)	45, 368, 431, 666, 776, 1286
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	6 cut(s)	111, 464, 676, 782, 788, 1249
BshNI	GGYRCC	2 cut(s)	997, 1396
BshTI	ACCGGT	1 cut(s)	1512
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	2 cut(s)	1168, 1370
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	8 cut(s)	54, 193, 473, 523, 606, 958, 1001, 1513
BslFI	GGGAC	4 cut(s)	245, 344, 872, 940
BslI	CCNNNNNNNGG	9 cut(s)	39, 299, 570, 684, 848, 1007, 1019, 1223, 1490
BsmAI	GTCTC	2 cut(s)	541, 935
BsmBI	CGTCTC	2 cut(s)	541, 935
BsmFI	GGGAC	4 cut(s)	245, 344, 872, 940
BsnI	GGCC	6 cut(s)	111, 464, 676, 782, 788, 1249
BsoBI	CYCGRG	1 cut(s)	116
Bsp1286I	GDGCHC	6 cut(s)	980, 1025, 1094, 1168, 1370, 1659
Bsp143I	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
Bsp68I	TCGCGA	1 cut(s)	368
BspANI	GGCC	6 cut(s)	111, 464, 676, 782, 788, 1249
BspCNI	CTCAG	5 cut(s)	118, 868, 1372, 1414, 1736
BspFNI	CGCG	6 cut(s)	45, 368, 431, 666, 776, 1286
BspHI	TCATGA	1 cut(s)	624
BspLI	GGNNCC	4 cut(s)	999, 1248, 1300, 1398
BspPI	GGATC	4 cut(s)	203, 750, 1123, 1677
BspQI	GCTCTTC	1 cut(s)	491
BspT107I	GGYRCC	2 cut(s)	997, 1396
BsrDI	GCAATG	1 cut(s)	1248
BsrFI	RCCGGY	3 cut(s)	472, 605, 1512
BsrI	ACTGG	3 cut(s)	571, 1576, 1671
BssAI	RCCGGY	3 cut(s)	472, 605, 1512
BssECI	CCNNGG	8 cut(s)	502, 774, 783, 1013, 1028, 1094, 1284, 1614
BssHII	GCGCGC	1 cut(s)	43
BssMI	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
BssNI	GRCGYC	3 cut(s)	380, 507, 657
BssT1I	CCWWGG	1 cut(s)	1013
Bst2UI	CCWGG	5 cut(s)	461, 479, 685, 1030, 1303
Bst4CI	ACNGT	4 cut(s)	17, 752, 1446, 1622
Bst6I	CTCTTC	2 cut(s)	491, 1403
BstACI	GRCGYC	3 cut(s)	380, 507, 657
BstC8I	GCNNGC	6 cut(s)	45, 49, 1037, 1288, 1292, 1366
BstDEI	CTNAG	6 cut(s)	105, 876, 1080, 1359, 1422, 1723
BstDSI	CCRYGG	5 cut(s)	502, 774, 783, 1094, 1284
BstENI	CCTNNNNNAGG	2 cut(s)	682, 1221
BstF5I	GGATG	8 cut(s)	352, 394, 924, 966, 1060, 1259, 1484, 1500
BstFNI	CGCG	6 cut(s)	45, 368, 431, 666, 776, 1286
BstH2I	RGCGCY	1 cut(s)	485
BstHHI	GCGC	9 cut(s)	45, 47, 53, 145, 431, 484, 668, 683, 1035
BstKTI	GATC	7 cut(s)	27, 198, 745, 1118, 1191, 1563, 1672
BstMAI	GTCTC	2 cut(s)	541, 935
BstMBI	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
BstMCI	CGRYCG	1 cut(s)	27
BstMWI	GCNNNNNNNGC	6 cut(s)	137, 663, 794, 803, 1229, 1238
BstNI	CCWGG	5 cut(s)	461, 479, 685, 1030, 1303
BstNSI	RCATGY	2 cut(s)	1039, 1294
BstSCI	CCNGG	6 cut(s)	459, 477, 683, 956, 1028, 1301
BstSLI	GKGCMC	3 cut(s)	980, 1370, 1659
BstUI	CGCG	6 cut(s)	45, 368, 431, 666, 776, 1286
BstV1I	GCAGC	3 cut(s)	127, 237, 1241
BstV2I	GAAGAC	3 cut(s)	232, 613, 740
BstX2I	RGATCY	2 cut(s)	195, 1669
BstYI	RGATCY	2 cut(s)	195, 1669
Bsu36I	CCTNAGG	2 cut(s)	105, 1359
BsuRI	GGCC	6 cut(s)	111, 464, 676, 782, 788, 1249
BtgI	CCRYGG	5 cut(s)	502, 774, 783, 1094, 1284
BtsCI	GGATG	8 cut(s)	352, 394, 924, 966, 1060, 1259, 1484, 1500
BtsIMutI	CAGTG	2 cut(s)	564, 1627
BtuMI	TCGCGA	1 cut(s)	368
Cac8I	GCNNGC	6 cut(s)	45, 49, 1037, 1288, 1292, 1366
CaiI	CAGNNNCTG	1 cut(s)	678
CciI	TCATGA	1 cut(s)	624
CfoI	GCGC	9 cut(s)	45, 47, 53, 145, 431, 484, 668, 683, 1035
Cfr10I	RCCGGY	3 cut(s)	472, 605, 1512
Cfr13I	GGNCC	6 cut(s)	109, 475, 675, 710, 1010, 1247
Cfr42I	CCGCGG	2 cut(s)	777, 1287
CpoI	CGGWCCG	1 cut(s)	710
CseI	GACGC	3 cut(s)	388, 496, 646
Csp6I	GTAC	5 cut(s)	540, 998, 1419, 1636, 1740
CspAI	ACCGGT	1 cut(s)	1512
CspCI	CAANNNNNGTGG	2 cut(s)	385, 420
CspI	CGGWCCG	1 cut(s)	710
CviAII	CATG	5 cut(s)	625, 1036, 1050, 1178, 1291
CviQI	GTAC	5 cut(s)	540, 998, 1419, 1636, 1740
DdeI	CTNAG	6 cut(s)	105, 876, 1080, 1359, 1422, 1723
DpnI	GATC	7 cut(s)	26, 197, 744, 1117, 1190, 1562, 1671
DpnII	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
DrdI	GACNNNNNNGTC	1 cut(s)	617
DseDI	GACNNNNNNGTC	1 cut(s)	617
EaeI	YGGCCR	1 cut(s)	786
Eam1104I	CTCTTC	2 cut(s)	491, 1403
EarI	CTCTTC	2 cut(s)	491, 1403
EciI	GGCGGA	4 cut(s)	118, 723, 812, 824
Ecl136II	GAGCTC	1 cut(s)	1166
Eco130I	CCWWGG	1 cut(s)	1013
Eco24I	GRGCYC	3 cut(s)	1025, 1094, 1168
Eco47I	GGWCC	3 cut(s)	475, 710, 1010
Eco53kI	GAGCTC	1 cut(s)	1166
Eco57I	CTGAAG	5 cut(s)	752, 1025, 1083, 1427, 1605
Eco81I	CCTNAGG	2 cut(s)	105, 1359
Eco88I	CYCGRG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	1166
EcoNI	CCTNNNNNAGG	2 cut(s)	682, 1221
EcoO109I	RGGNCCY	1 cut(s)	675
EcoRI	GAATTC	2 cut(s)	518, 1205
EcoRII	CCWGG	5 cut(s)	459, 477, 683, 1028, 1301
EcoT14I	CCWWGG	1 cut(s)	1013
EcoT38I	GRGCYC	3 cut(s)	1025, 1094, 1168
ErhI	CCWWGG	1 cut(s)	1013
Esp3I	CGTCTC	2 cut(s)	541, 935
FaeI	CATG	5 cut(s)	628, 1039, 1053, 1181, 1294
FaqI	GGGAC	4 cut(s)	245, 344, 872, 940
FatI	CATG	5 cut(s)	624, 1035, 1049, 1177, 1290
FauI	CCCGC	3 cut(s)	841, 1279, 1291
FbaI	TGATCA	1 cut(s)	1188
FblI	GTMKAC	1 cut(s)	986
Fnu4HI	GCNGC	6 cut(s)	141, 251, 293, 470, 807, 1230
FokI	GGATG	8 cut(s)	359, 401, 931, 973, 1067, 1246, 1471, 1507
FriOI	GRGCYC	3 cut(s)	1025, 1094, 1168
Fsp4HI	GCNGC	6 cut(s)	141, 251, 293, 470, 807, 1230
FspBI	CTAG	1 cut(s)	87
GlaI	GCGC	9 cut(s)	44, 46, 52, 144, 430, 483, 667, 682, 1034
GluI	GCNGC	6 cut(s)	141, 251, 293, 470, 807, 1230
GsaI	CCCAGC	1 cut(s)	918
GsuI	CTGGAG	1 cut(s)	592
HaeII	RGCGCY	1 cut(s)	485
HaeIII	GGCC	6 cut(s)	111, 464, 676, 782, 788, 1249
HapII	CCGG	8 cut(s)	54, 193, 473, 523, 606, 958, 1001, 1513
HgaI	GACGC	3 cut(s)	388, 496, 646
HhaI	GCGC	9 cut(s)	45, 47, 53, 145, 431, 484, 668, 683, 1035
Hin1I	GRCGYC	3 cut(s)	380, 507, 657
Hin1II	CATG	5 cut(s)	628, 1039, 1053, 1181, 1294
Hin6I	GCGC	9 cut(s)	43, 45, 51, 143, 429, 482, 666, 681, 1033
HinP1I	GCGC	9 cut(s)	43, 45, 51, 143, 429, 482, 666, 681, 1033
HincII	GTYRAC	2 cut(s)	586, 987
HindII	GTYRAC	2 cut(s)	586, 987
HinfI	GANTC	8 cut(s)	354, 408, 434, 611, 950, 1158, 1174, 1733
HpaII	CCGG	8 cut(s)	54, 193, 473, 523, 606, 958, 1001, 1513
HphI	GGTGA	7 cut(s)	5, 484, 553, 620, 880, 1017, 1099
Hpy166II	GTNNAC	5 cut(s)	94, 586, 987, 1368, 1442
Hpy188III	TCNNGA	5 cut(s)	367, 625, 746, 756, 1691
Hpy8I	GTNNAC	5 cut(s)	94, 586, 987, 1368, 1442
HpyAV	CCTTC	6 cut(s)	393, 753, 757, 883, 892, 1580
HpyCH4III	ACNGT	4 cut(s)	17, 752, 1446, 1622
HpyCH4IV	ACGT	2 cut(s)	285, 1139
HpyCH4V	TGCA	7 cut(s)	1072, 1196, 1259, 1294, 1368, 1519, 1611
HpyF10VI	GCNNNNNNNGC	6 cut(s)	137, 663, 794, 803, 1229, 1238
HpyF3I	CTNAG	6 cut(s)	105, 876, 1080, 1359, 1422, 1723
HpySE526I	ACGT	2 cut(s)	285, 1139
Hsp92I	GRCGYC	3 cut(s)	380, 507, 657
Hsp92II	CATG	5 cut(s)	628, 1039, 1053, 1181, 1294
HspAI	GCGC	9 cut(s)	43, 45, 51, 143, 429, 482, 666, 681, 1033
KpnI	GGTACC	1 cut(s)	1001
Ksp22I	TGATCA	1 cut(s)	1188
KspI	CCGCGG	2 cut(s)	777, 1287
Kzo9I	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
LguI	GCTCTTC	1 cut(s)	491
LmnI	GCTCC	4 cut(s)	573, 1171, 1226, 1298
Lsp1109I	GCAGC	3 cut(s)	127, 237, 1241
LweI	GCATC	3 cut(s)	379, 585, 1268
MaeI	CTAG	1 cut(s)	87
MaeII	ACGT	2 cut(s)	285, 1139
MaeIII	GTNAC	2 cut(s)	608, 1045
MalI	GATC	7 cut(s)	26, 197, 744, 1117, 1190, 1562, 1671
MboI	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
MboII	GAAGA	8 cut(s)	232, 382, 478, 613, 745, 1201, 1214, 1420
MflI	RGATCY	2 cut(s)	195, 1669
MhlI	GDGCHC	6 cut(s)	980, 1025, 1094, 1168, 1370, 1659
MluCI	AATT	9 cut(s)	518, 1107, 1128, 1205, 1234, 1276, 1375, 1454, 1675
MlyI	GAGTC	5 cut(s)	363, 428, 605, 944, 1183
MmeI	TCCRAC	2 cut(s)	225, 1093
MseI	TTAA	4 cut(s)	453, 1343, 1674, 1707
MspA1I	CMGCKG	5 cut(s)	140, 776, 1286, 1549, 1727
MspI	CCGG	8 cut(s)	54, 193, 473, 523, 606, 958, 1001, 1513
MspR9I	CCNGG	6 cut(s)	461, 479, 685, 958, 1030, 1303
MvaI	CCWGG	5 cut(s)	461, 479, 685, 1030, 1303
MvnI	CGCG	6 cut(s)	45, 368, 431, 666, 776, 1286
MwoI	GCNNNNNNNGC	6 cut(s)	137, 663, 794, 803, 1229, 1238
NciI	CCSGG	1 cut(s)	958
NdeII	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
NlaIII	CATG	5 cut(s)	628, 1039, 1053, 1181, 1294
NlaIV	GGNNCC	4 cut(s)	999, 1248, 1300, 1398
NmeAIII	GCCGAG	1 cut(s)	490
NmuCI	GTSAC	1 cut(s)	608
NruI	TCGCGA	1 cut(s)	368
NspI	RCATGY	2 cut(s)	1039, 1294
PaeI	GCATGC	2 cut(s)	1039, 1294
PaeR7I	CTCGAG	1 cut(s)	116
PagI	TCATGA	1 cut(s)	624
PalAI	GGCGCGCC	1 cut(s)	43
PauI	GCGCGC	1 cut(s)	43
PciSI	GCTCTTC	1 cut(s)	491
PcsI	WCGNNNNNNNCGW	1 cut(s)	950
PfeI	GAWTC	3 cut(s)	408, 1158, 1733
PflFI	GACNNNGTC	3 cut(s)	236, 353, 614
PflMI	CCANNNNNTGG	3 cut(s)	39, 570, 1490
PfoI	TCCNGGA	1 cut(s)	956
PinAI	ACCGGT	1 cut(s)	1512
PkrI	GCNGC	6 cut(s)	142, 252, 294, 471, 808, 1231
Ple19I	CGATCG	1 cut(s)	27
PleI	GAGTC	5 cut(s)	362, 428, 605, 944, 1182
PpsI	GAGTC	5 cut(s)	362, 428, 605, 944, 1182
Psp124BI	GAGCTC	1 cut(s)	1168
Psp1406I	AACGTT	1 cut(s)	1139
Psp6I	CCWGG	5 cut(s)	459, 477, 683, 1028, 1301
PspFI	CCCAGC	1 cut(s)	914
PspGI	CCWGG	5 cut(s)	459, 477, 683, 1028, 1301
PspN4I	GGNNCC	4 cut(s)	999, 1248, 1300, 1398
PspPI	GGNCC	6 cut(s)	109, 475, 675, 710, 1010, 1247
PspXI	VCTCGAGB	1 cut(s)	116
PstNI	CAGNNNCTG	1 cut(s)	678
PsuI	RGATCY	2 cut(s)	195, 1669
PsyI	GACNNNGTC	3 cut(s)	236, 353, 614
PteI	GCGCGC	1 cut(s)	43
PvuI	CGATCG	1 cut(s)	27
PvuII	CAGCTG	2 cut(s)	1549, 1727
RruI	TCGCGA	1 cut(s)	368
RsaI	GTAC	5 cut(s)	541, 999, 1420, 1637, 1741
RsaNI	GTAC	5 cut(s)	540, 998, 1419, 1636, 1740
Rsr2I	CGGWCCG	1 cut(s)	710
RsrII	CGGWCCG	1 cut(s)	710
SacI	GAGCTC	1 cut(s)	1168
SacII	CCGCGG	2 cut(s)	777, 1287
SalI	GTCGAC	1 cut(s)	985
SapI	GCTCTTC	1 cut(s)	491
SaqAI	TTAA	4 cut(s)	453, 1343, 1674, 1707
SatI	GCNGC	6 cut(s)	141, 251, 293, 470, 807, 1230
Sau3AI	GATC	7 cut(s)	24, 195, 742, 1115, 1188, 1560, 1669
Sau96I	GGNCC	6 cut(s)	109, 475, 675, 710, 1010, 1247
SchI	GAGTC	5 cut(s)	363, 428, 605, 944, 1183
ScrFI	CCNGG	6 cut(s)	461, 479, 685, 958, 1030, 1303
SduI	GDGCHC	6 cut(s)	980, 1025, 1094, 1168, 1370, 1659
SfaNI	GCATC	3 cut(s)	379, 585, 1268
Sfr274I	CTCGAG	1 cut(s)	116
Sfr303I	CCGCGG	2 cut(s)	777, 1287
SgrAI	CRCCGGYG	1 cut(s)	605
SgrBI	CCGCGG	2 cut(s)	777, 1287
SgsI	GGCGCGCC	1 cut(s)	43
SinI	GGWCC	3 cut(s)	475, 710, 1010
SlaI	CTCGAG	1 cut(s)	116
SmlI	CTYRAG	1 cut(s)	116
SmoI	CTYRAG	1 cut(s)	116
SphI	GCATGC	2 cut(s)	1039, 1294
Sse9I	AATT	9 cut(s)	518, 1107, 1128, 1205, 1234, 1276, 1375, 1454, 1675
SspMI	CTAG	1 cut(s)	87
SstI	GAGCTC	1 cut(s)	1168
StyD4I	CCNGG	6 cut(s)	459, 477, 683, 956, 1028, 1301
StyI	CCWWGG	1 cut(s)	1013
TaaI	ACNGT	4 cut(s)	17, 752, 1446, 1622
TaiI	ACGT	2 cut(s)	288, 1142
TaqI	TCGA	6 cut(s)	23, 27, 117, 722, 986, 1104
TaqII	GACCGA	1 cut(s)	727
TasI	AATT	9 cut(s)	518, 1107, 1128, 1205, 1234, 1276, 1375, 1454, 1675
TatI	WGTACW	3 cut(s)	1418, 1635, 1739
TauI	GCSGC	3 cut(s)	295, 472, 809
TfiI	GAWTC	3 cut(s)	408, 1158, 1733
Tru1I	TTAA	4 cut(s)	453, 1343, 1674, 1707
Tru9I	TTAA	4 cut(s)	453, 1343, 1674, 1707
TscAI	CASTG	2 cut(s)	571, 1627
TseFI	GTSAC	1 cut(s)	608
TseI	GCWGC	3 cut(s)	140, 250, 1229
Tsp45I	GTSAC	1 cut(s)	608
TspDTI	ATGAA	5 cut(s)	613, 640, 1071, 1467, 1556
TspGWI	ACGGA	5 cut(s)	52, 604, 650, 959, 1665
TspRI	CASTG	2 cut(s)	571, 1627
Tth111I	GACNNNGTC	3 cut(s)	236, 353, 614
Van91I	CCANNNNNTGG	3 cut(s)	39, 570, 1490
VneI	GTGCAC	1 cut(s)	1366
VpaK11BI	GGWCC	3 cut(s)	475, 710, 1010
XagI	CCTNNNNNAGG	2 cut(s)	682, 1221
XapI	RAATTY	2 cut(s)	518, 1205
XceI	RCATGY	2 cut(s)	1039, 1294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	849
XhoI	CTCGAG	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	986
XspI	CTAG	1 cut(s)	87

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.