Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0000804

Physical Location & Seq

Genomic Coordinates Forward (+)

14288160 .. 14291160

Gene Structure 3001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g14870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGCCTCCGCCCCATCAGCCTCACTCGCACTCTCACCGCCGTTCGATCGACCCCAAAATCTGGAGGGCCTGCGCCGGAAACTCCGTCCAAATCCCCTCCCTCCACTCTAGGGTTTACTACTTCCCCCAGGGACACCTTGAGCAATCCTCCTCCTCCAACTCCTCCTCCTCCGCCGTCCTCCTATCCCCTCTCCTCCTCTCCAAGCCTCTCATTCTCTGCCGGATCTCCGCCCTCCACTTCCTCGCCGTCCCTACCACCGACGAGGTCTTCGCCAAGCTACTTCTCGTACCTATTCCCCAGGAGTTCCCCAACCTCGAGCAGCGGAACGGCGAGGAGTTCGACGCCGATGATGGCGGGGACTCGGAACGACAGGACGACAAAGTCGTTTCGTTCTCGAAGATACTGACGCCTTCGGATGCTAACAATGGGGGTGGATTCTCTGTTCCAAGGTTCTGTGCCGACTCGATATTCCCTCCGCTTAACTACCAGGCCGACCCGCCGGTCCAGATGCTTTCCGTCACCGACCTCCACGGTGTCGTTTGGGAATTCCGGCACATATACAGGGGGACTCCGAGACGGCACTTGCTTACCACCGGCTGGAGCAAGTTCGTCAACCACAAGATGCTCGTCGCTGGCGACTCTGTCGTTTTCATGAGGAACGGGAGAGGCGAGATGTTCATCGGCGTCCGCCGCGCCGTTAGGTCCACTGCCAGCTCCGACTGCGCTAGGTTGAGCTCTCAGATAGGAGGCGGAGTGACGTACTCGACGAGGCCGAATACAGAGGATCAGGACTGTTCTGGAAGGAAGGTAATGTCAGCGGAGGCGGTGGCCGAAGTGGCGGAAATGGCGGCGGAGGGGAGGCCGTTTGAGGTGGTGTATTATCCAAAAGCGGGGTGGTCGGACTTTGTGGTGAAGGCTGAGGTGGTGGAGAAGGCCTTGAAGGTGTTTTGGACAGCTGGGATGAGAGTGAAGTTGGCCATGGAGACGGAGGACTCGTCCCGGATGACTTGGTTTCAGGGCACTTTGTCAACGACCTCGGTGCCGGAAAATGGGCCTTGGCAGGGCTCACCCTGGCGCATGCTTCAGGTTACATGGGATGAACCTGAAGTTCTGCAGAACACTAAGAGGGTGAGCCCGTGGGAAGTCGAATTTGTTGGATCAGCACCTTCAATTCATACTACCTTTTACCCCACAAAGAGATTCAGAGCTCCTCTGAGTCATGGGCTGTTGACCAATGCAGAGGGAGAATTCTTTTTTCCTATGACGGGAGCAGCTAATTCAGCAATGGTGCCTTTTAGTGCATCCTTGTTGAACTATAACAATTTTCCTGCGGGCATGCAGGGAGCCAGGCAAGATACATTCTGTGTATCTAATCTATCCCACTTGTTAAGTGAAAACACTCCTCAGATGTGCACTTTCAATTCCATTGGCAAAAATGAGGGGCAAAAGTTGAAGAGGGTGTGTACTGAGTTGAACATTGGTAGTTCACAATCTGATGAATTGTCACCAGATAGCCAGAGTAGTGTGCAATCCTTAGGCATGGAACTTGATGGAAACCGGTCACAGACAAAGGTTGGCAGAAGTTCGTTTCAGCTGTTTGGTAAGATCATTTATATGAACCAGCCTGTTGAAGGTTGTTTTGATGATGTTGGTTGCACCGAGGACAGTGGCAACAAAGGGTACAATGAAACTGAAGAAGGGCACAACCAACTGGATCTTTCTTTTACCAAACTTCTTGATAGGATTGATGTTCAATGTCAGAGAGCATCAGCTGTTGAAGCTTGTACTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010927 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0022622 GO:0023052 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033036 GO:0033037 GO:0042221 GO:0042545 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048364 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0051716 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0085029 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

598

Amino Acids

65.99

Weight (kDa)

5.8

Isoelectric Point (pI)

52.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	131 - 232	3.2e-22	B3 DNA binding domain
BRWD_AD	PF25313	280 - 385	4e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	302 - 385	1e-27	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77850 AT1G77850 ATMG00940
fragaria_vesca	FvH4_5g38640 FvH4_5g38681 FvH4_5g38690 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_6g33200
malus_domestica	MD00G1103900.v1.1 MD15G1359400.v1.1
prunus_persica	Prupe.1G507000_v2.0.a1
pyrus_communis	pycom08g14870 pycom15g32180
rosa_chinensis	RchiOBHm_Chr7g0240691
rosa_laevigata	RLG00000000626 RLG00000000646 RLG00000000656 RLG00000000659 RLG00000000668 RLG00000018665
rosa_multiflora	Rmu_co8133848.1_g000001 Rmu_co8172656.1_g000002 Rmu_sc0001483.1_g000002 Rmu_sc0001921.1_g000034 Rmu_sc0002517.1_g000004 Rmu_sc0004799.1_g000003 Rmu_sc0004799.1_g000004 Rmu_sc0011947.1_g000001 Rmu_sc0023480.1_g000003 Rmu_sc0030169.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121890 Rroxscaffold_3G00219660 Rroxscaffold_3G00219860 Rroxscaffold_3G00219880 Rroxscaffold_3G00236300
rosa_rugosa	Rorug02G0236900 Rorug02G0237000 Rorug07G0337600 Rorug07G0338300
rosa_samantha	Rh2AG295100 Rh7AG491700 Rh7AG492100 Rh7AG492900 Rh7BG464200 Rh7BG464600 Rh7BG464900 Rh7CG508200 Rh7CG508500 Rh7CG509100 Rh7CG509700 Rh7CG510000 Rh7CG511300 Rh7DG475700 Rh7DG476000 Rh7DG476700 Rh7DG477300 Rh7DG477600 Rh7DG478100
rosa_wichuraiana	Rw0G013480 Rw7G041210 Rw7G041230 Rw7G041320 Rw7G041490 Rw7G041510 Rw7G041550 Rw7G041690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	380, 500
AccB1I	GGYRCC	2 cut(s)	1039, 1288
AccB7I	CCANNNNNTGG	2 cut(s)	60, 597
AccII	CGCG	1 cut(s)	693
AclWI	GGATC	4 cut(s)	230, 792, 1165, 1722
AcoI	YGGCCR	2 cut(s)	828, 975
AcsI	RAATTY	3 cut(s)	545, 1148, 1247
AcuI	CTGAAG	3 cut(s)	1067, 1125, 1713
AcyI	GRCGYC	3 cut(s)	342, 407, 684
AfaI	GTAC	5 cut(s)	288, 761, 1465, 1682, 1786
AfiI	CCNNNNNNNGG	8 cut(s)	60, 109, 597, 890, 1049, 1061, 1265, 1631
AgeI	ACCGGT	1 cut(s)	1557
AgsI	TTSAA	9 cut(s)	940, 1170, 1312, 1420, 1453, 1474, 1631, 1754, 1778
AjnI	CCWGG	5 cut(s)	126, 297, 486, 1070, 1346
AloI	GAACNNNNNNTCC	2 cut(s)	426, 458
AluBI	AGCT	9 cut(s)	277, 714, 735, 956, 1208, 1274, 1594, 1772, 1781
AluI	AGCT	9 cut(s)	277, 714, 735, 956, 1208, 1274, 1594, 1772, 1781
Alw21I	GWGCWC	3 cut(s)	737, 1210, 1415
Alw26I	GTCTC	2 cut(s)	568, 977
Alw44I	GTGCAC	1 cut(s)	1411
AlwI	GGATC	4 cut(s)	230, 792, 1165, 1722
Ama87I	CYCGRG	1 cut(s)	314
AoxI	GGCC	8 cut(s)	66, 489, 770, 828, 860, 933, 975, 1052
ApaLI	GTGCAC	1 cut(s)	1411
ApeKI	GCWGC	2 cut(s)	319, 1271
ApoI	RAATTY	3 cut(s)	545, 1148, 1247
ArsI	GACNNNNNNTTYG	2 cut(s)	251, 283
AsiGI	ACCGGT	1 cut(s)	1557
AspLEI	GCGC	4 cut(s)	74, 695, 725, 1077
AspS9I	GGNCC	4 cut(s)	66, 502, 702, 1052
AsuC2I	CCSGG	1 cut(s)	1000
AsuHPI	GGTGA	6 cut(s)	26, 511, 922, 1059, 1141, 1497
AvaI	CYCGRG	1 cut(s)	314
AvaII	GGWCC	2 cut(s)	502, 702
AxyI	CCTNAGG	1 cut(s)	1534
BaeGI	GKGCMC	3 cut(s)	1022, 1415, 1704
BalI	TGGCCA	1 cut(s)	977
BanI	GGYRCC	2 cut(s)	1039, 1288
BanII	GRGCYC	4 cut(s)	737, 1067, 1136, 1210
BbsI	GAAGAC	1 cut(s)	259
Bbv12I	GWGCWC	3 cut(s)	737, 1210, 1415
BbvCI	CCTCAGC	1 cut(s)	918
BbvI	GCAGC	2 cut(s)	331, 1283
BccI	CCATC	3 cut(s)	21, 344, 1544
BceAI	ACGGC	7 cut(s)	24, 158, 230, 343, 593, 680, 847
BcgI	CGANNNNNNTGC	2 cut(s)	1021, 1055
BciT130I	CCWGG	5 cut(s)	128, 299, 488, 1072, 1348
BcnI	CCSGG	1 cut(s)	1000
BcoDI	GTCTC	2 cut(s)	568, 977
BfaI	CTAG	2 cut(s)	108, 726
BfmI	CTRYAG	1 cut(s)	1112
BglI	GCCNNNNNGGC	1 cut(s)	836
BisI	GCNGC	4 cut(s)	320, 691, 849, 1272
BlsI	GCNGC	4 cut(s)	321, 692, 850, 1273
Bme1390I	CCNGG	6 cut(s)	128, 299, 488, 1000, 1072, 1348
Bme18I	GGWCC	2 cut(s)	502, 702
BmeT110I	CYCGRG	1 cut(s)	314
BmgT120I	GGNCC	4 cut(s)	66, 502, 702, 1052
BmiI	GGNNCC	3 cut(s)	1041, 1290, 1345
BmrFI	CCNGG	6 cut(s)	128, 299, 488, 1000, 1072, 1348
BmsI	GCATC	5 cut(s)	406, 498, 612, 1310, 1775
BpiI	GAAGAC	1 cut(s)	259
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
BpmI	CTGGAG	2 cut(s)	82, 619
Bpu10I	CCTNAGC	1 cut(s)	918
BpuEI	CTTGAG	1 cut(s)	158
BpuMI	CCSGG	1 cut(s)	1000
BsaBI	GATNNNNATC	1 cut(s)	677
BsaHI	GRCGYC	3 cut(s)	342, 407, 684
BsaWI	WCCGGW	1 cut(s)	1557
BsaXI	ACNNNNNCTCC	6 cut(s)	149, 179, 738, 768, 980, 1010
Bsc4I	CCNNNNNNNGG	8 cut(s)	60, 109, 597, 890, 1049, 1061, 1265, 1631
Bse118I	RCCGGY	3 cut(s)	499, 593, 1557
Bse1I	ACTGG	1 cut(s)	1716
Bse21I	CCTNAGG	1 cut(s)	1534
Bse3DI	GCAATG	1 cut(s)	1290
Bse8I	GATNNNNATC	1 cut(s)	677
BseBI	CCWGG	5 cut(s)	128, 299, 488, 1072, 1348
BseGI	GGATG	5 cut(s)	421, 966, 1008, 1102, 1301
BseJI	GATNNNNATC	1 cut(s)	677
BseLI	CCNNNNNNNGG	8 cut(s)	60, 109, 597, 890, 1049, 1061, 1265, 1631
BseMI	GCAATG	1 cut(s)	1290
BseMII	CTCAG	5 cut(s)	752, 909, 1205, 1418, 1458
BseNI	ACTGG	1 cut(s)	1716
BseSI	GKGCMC	3 cut(s)	1022, 1415, 1704
BseXI	GCAGC	2 cut(s)	331, 1283
BseYI	CCCAGC	1 cut(s)	956
Bsh1236I	CGCG	1 cut(s)	693
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	8 cut(s)	68, 491, 772, 830, 862, 935, 977, 1054
BshNI	GGYRCC	2 cut(s)	1039, 1288
BshTI	ACCGGT	1 cut(s)	1557
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	3 cut(s)	737, 1210, 1415
BsiHKCI	CYCGRG	1 cut(s)	314
BsiSI	CCGG	8 cut(s)	75, 220, 500, 550, 594, 1000, 1043, 1558
BslFI	GGGAC	5 cut(s)	144, 233, 371, 580, 982
BslI	CCNNNNNNNGG	8 cut(s)	60, 109, 597, 890, 1049, 1061, 1265, 1631
BsmAI	GTCTC	2 cut(s)	568, 977
BsmBI	CGTCTC	2 cut(s)	568, 977
BsmFI	GGGAC	5 cut(s)	144, 233, 371, 580, 982
BsnI	GGCC	8 cut(s)	68, 491, 772, 830, 862, 935, 977, 1054
BsoBI	CYCGRG	1 cut(s)	314
Bsp1286I	GDGCHC	7 cut(s)	737, 1022, 1067, 1136, 1210, 1415, 1704
Bsp143I	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
Bsp19I	CCATGG	1 cut(s)	978
BspANI	GGCC	8 cut(s)	68, 491, 772, 830, 862, 935, 977, 1054
BspCNI	CTCAG	5 cut(s)	751, 910, 1206, 1417, 1459
BspFNI	CGCG	1 cut(s)	693
BspHI	TCATGA	1 cut(s)	651
BspLI	GGNNCC	3 cut(s)	1041, 1290, 1345
BspMAI	CTGCAG	1 cut(s)	1116
BspPI	GGATC	4 cut(s)	230, 792, 1165, 1722
BspT107I	GGYRCC	2 cut(s)	1039, 1288
BsrDI	GCAATG	1 cut(s)	1290
BsrFI	RCCGGY	3 cut(s)	499, 593, 1557
BsrI	ACTGG	1 cut(s)	1716
BssAI	RCCGGY	3 cut(s)	499, 593, 1557
BssMI	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
BssNI	GRCGYC	3 cut(s)	342, 407, 684
BssT1I	CCWWGG	3 cut(s)	446, 978, 1055
Bst2UI	CCWGG	5 cut(s)	128, 299, 488, 1072, 1348
Bst4CI	ACNGT	3 cut(s)	533, 794, 1667
Bst6I	CTCTTC	1 cut(s)	1448
BstACI	GRCGYC	3 cut(s)	342, 407, 684
BstC8I	GCNNGC	6 cut(s)	70, 634, 712, 1079, 1333, 1337
BstDEI	CTNAG	7 cut(s)	738, 918, 1122, 1214, 1404, 1467, 1534
BstDSI	CCRYGG	3 cut(s)	529, 978, 1136
BstENI	CCTNNNNNAGG	1 cut(s)	1629
BstF5I	GGATG	5 cut(s)	421, 966, 1008, 1102, 1301
BstFNI	CGCG	1 cut(s)	693
BstHHI	GCGC	4 cut(s)	74, 695, 725, 1077
BstKTI	GATC	6 cut(s)	48, 225, 787, 1160, 1608, 1717
BstMAI	GTCTC	2 cut(s)	568, 977
BstMBI	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	8 cut(s)	16, 25, 690, 720, 836, 845, 1280, 1778
BstNI	CCWGG	5 cut(s)	128, 299, 488, 1072, 1348
BstNSI	RCATGY	2 cut(s)	1081, 1339
BstSCI	CCNGG	6 cut(s)	126, 297, 486, 998, 1070, 1346
BstSFI	CTRYAG	1 cut(s)	1112
BstSLI	GKGCMC	3 cut(s)	1022, 1415, 1704
BstUI	CGCG	1 cut(s)	693
BstV1I	GCAGC	2 cut(s)	331, 1283
BstV2I	GAAGAC	1 cut(s)	259
BstX2I	RGATCY	2 cut(s)	222, 1714
BstYI	RGATCY	2 cut(s)	222, 1714
Bsu36I	CCTNAGG	1 cut(s)	1534
BsuRI	GGCC	8 cut(s)	68, 491, 772, 830, 862, 935, 977, 1054
BtgI	CCRYGG	3 cut(s)	529, 978, 1136
BtsCI	GGATG	5 cut(s)	421, 966, 1008, 1102, 1301
BtsI	GCAGTG	1 cut(s)	705
BtsIMutI	CAGTG	2 cut(s)	705, 1672
Cac8I	GCNNGC	6 cut(s)	70, 634, 712, 1079, 1333, 1337
CciI	TCATGA	1 cut(s)	651
CfoI	GCGC	4 cut(s)	74, 695, 725, 1077
Cfr10I	RCCGGY	3 cut(s)	499, 593, 1557
Cfr13I	GGNCC	4 cut(s)	66, 502, 702, 1052
CseI	GACGC	3 cut(s)	350, 415, 673
Csp6I	GTAC	5 cut(s)	287, 760, 1464, 1681, 1785
CspAI	ACCGGT	1 cut(s)	1557
CspCI	CAANNNNNGTGG	2 cut(s)	412, 447
CviAII	CATG	7 cut(s)	652, 979, 1078, 1092, 1220, 1336, 1540
CviQI	GTAC	5 cut(s)	287, 760, 1464, 1681, 1785
DdeI	CTNAG	7 cut(s)	738, 918, 1122, 1214, 1404, 1467, 1534
DpnI	GATC	6 cut(s)	47, 224, 786, 1159, 1607, 1716
DpnII	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
DrdI	GACNNNNNNGTC	2 cut(s)	380, 500
DseDI	GACNNNNNNGTC	2 cut(s)	380, 500
EaeI	YGGCCR	2 cut(s)	828, 975
Eam1104I	CTCTTC	1 cut(s)	1448
EarI	CTCTTC	1 cut(s)	1448
EciI	GGCGGA	6 cut(s)	160, 217, 677, 765, 854, 866
Ecl136II	GAGCTC	2 cut(s)	735, 1208
Eco130I	CCWWGG	3 cut(s)	446, 978, 1055
Eco147I	AGGCCT	1 cut(s)	935
Eco24I	GRGCYC	4 cut(s)	737, 1067, 1136, 1210
Eco47I	GGWCC	2 cut(s)	502, 702
Eco53kI	GAGCTC	2 cut(s)	735, 1208
Eco57I	CTGAAG	3 cut(s)	1067, 1125, 1713
Eco81I	CCTNAGG	1 cut(s)	1534
Eco88I	CYCGRG	1 cut(s)	314
EcoICRI	GAGCTC	2 cut(s)	735, 1208
EcoNI	CCTNNNNNAGG	1 cut(s)	1629
EcoO109I	RGGNCCY	1 cut(s)	66
EcoRI	GAATTC	2 cut(s)	545, 1247
EcoRII	CCWGG	5 cut(s)	126, 297, 486, 1070, 1346
EcoT14I	CCWWGG	3 cut(s)	446, 978, 1055
EcoT38I	GRGCYC	4 cut(s)	737, 1067, 1136, 1210
ErhI	CCWWGG	3 cut(s)	446, 978, 1055
Esp3I	CGTCTC	2 cut(s)	568, 977
FaeI	CATG	7 cut(s)	655, 982, 1081, 1095, 1223, 1339, 1543
FaqI	GGGAC	5 cut(s)	144, 233, 371, 580, 982
FatI	CATG	7 cut(s)	651, 978, 1077, 1091, 1219, 1335, 1539
FauI	CCCGC	4 cut(s)	347, 504, 883, 1324
Fnu4HI	GCNGC	4 cut(s)	320, 691, 849, 1272
FokI	GGATG	5 cut(s)	428, 973, 1015, 1109, 1288
FriOI	GRGCYC	4 cut(s)	737, 1067, 1136, 1210
Fsp4HI	GCNGC	4 cut(s)	320, 691, 849, 1272
FspBI	CTAG	2 cut(s)	108, 726
GlaI	GCGC	4 cut(s)	73, 694, 724, 1076
GluI	GCNGC	4 cut(s)	320, 691, 849, 1272
GsaI	CCCAGC	1 cut(s)	960
GsuI	CTGGAG	2 cut(s)	82, 619
HaeIII	GGCC	8 cut(s)	68, 491, 772, 830, 862, 935, 977, 1054
HapII	CCGG	8 cut(s)	75, 220, 500, 550, 594, 1000, 1043, 1558
HgaI	GACGC	3 cut(s)	350, 415, 673
HhaI	GCGC	4 cut(s)	74, 695, 725, 1077
Hin1I	GRCGYC	3 cut(s)	342, 407, 684
Hin1II	CATG	7 cut(s)	655, 982, 1081, 1095, 1223, 1339, 1543
Hin6I	GCGC	4 cut(s)	72, 693, 723, 1075
HinP1I	GCGC	4 cut(s)	72, 693, 723, 1075
HincII	GTYRAC	3 cut(s)	613, 1029, 1230
HindII	GTYRAC	3 cut(s)	613, 1029, 1230
HindIII	AAGCTT	1 cut(s)	1779
HinfI	GANTC	8 cut(s)	359, 435, 461, 568, 638, 992, 1200, 1216
HpaII	CCGG	8 cut(s)	75, 220, 500, 550, 594, 1000, 1043, 1558
HphI	GGTGA	6 cut(s)	26, 511, 922, 1059, 1141, 1497
Hpy166II	GTNNAC	8 cut(s)	115, 613, 705, 1029, 1230, 1413, 1464, 1487
Hpy188III	TCNNGA	7 cut(s)	61, 394, 505, 652, 788, 798, 1736
Hpy8I	GTNNAC	8 cut(s)	115, 613, 705, 1029, 1230, 1413, 1464, 1487
Hpy99I	CGWCG	4 cut(s)	263, 344, 632, 769
HpyAV	CCTTC	9 cut(s)	420, 795, 799, 907, 925, 934, 1176, 1625, 1691
HpyCH4III	ACNGT	3 cut(s)	533, 794, 1667
HpyCH4IV	ACGT	1 cut(s)	758
HpyCH4V	TGCA	7 cut(s)	1114, 1238, 1301, 1339, 1413, 1528, 1656
HpyF10VI	GCNNNNNNNGC	8 cut(s)	16, 25, 690, 720, 836, 845, 1280, 1778
HpyF3I	CTNAG	7 cut(s)	738, 918, 1122, 1214, 1404, 1467, 1534
HpySE526I	ACGT	1 cut(s)	758
Hsp92I	GRCGYC	3 cut(s)	342, 407, 684
Hsp92II	CATG	7 cut(s)	655, 982, 1081, 1095, 1223, 1339, 1543
HspAI	GCGC	4 cut(s)	72, 693, 723, 1075
Kzo9I	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
LmnI	GCTCC	5 cut(s)	600, 719, 1213, 1268, 1343
Lsp1109I	GCAGC	2 cut(s)	331, 1283
LweI	GCATC	5 cut(s)	406, 498, 612, 1310, 1775
MaeI	CTAG	2 cut(s)	108, 726
MaeII	ACGT	1 cut(s)	758
MaeIII	GTNAC	5 cut(s)	517, 754, 1087, 1503, 1560
MalI	GATC	6 cut(s)	47, 224, 786, 1159, 1607, 1716
MboI	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
MboII	GAAGA	4 cut(s)	259, 409, 1465, 1706
MflI	RGATCY	2 cut(s)	222, 1714
MhlI	GDGCHC	7 cut(s)	737, 1022, 1067, 1136, 1210, 1415, 1704
MlsI	TGGCCA	1 cut(s)	977
MluCI	AATT	8 cut(s)	545, 1148, 1170, 1247, 1276, 1321, 1420, 1499
MluNI	TGGCCA	1 cut(s)	977
MlyI	GAGTC	6 cut(s)	353, 455, 562, 632, 986, 1225
MmeI	TCCRAC	4 cut(s)	180, 741, 879, 1135
Mox20I	TGGCCA	1 cut(s)	977
MscI	TGGCCA	1 cut(s)	977
MseI	TTAA	2 cut(s)	480, 1388
MslI	CAYNNNNRTG	1 cut(s)	1613
Msp20I	TGGCCA	1 cut(s)	977
MspA1I	CMGCKG	5 cut(s)	322, 818, 956, 1594, 1772
MspI	CCGG	8 cut(s)	75, 220, 500, 550, 594, 1000, 1043, 1558
MspR9I	CCNGG	6 cut(s)	128, 299, 488, 1000, 1072, 1348
MvaI	CCWGG	5 cut(s)	128, 299, 488, 1072, 1348
MvnI	CGCG	1 cut(s)	693
MwoI	GCNNNNNNNGC	8 cut(s)	16, 25, 690, 720, 836, 845, 1280, 1778
NciI	CCSGG	1 cut(s)	1000
NcoI	CCATGG	1 cut(s)	978
NdeII	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
NlaIII	CATG	7 cut(s)	655, 982, 1081, 1095, 1223, 1339, 1543
NlaIV	GGNNCC	3 cut(s)	1041, 1290, 1345
NmuCI	GTSAC	4 cut(s)	517, 754, 1503, 1560
NspI	RCATGY	2 cut(s)	1081, 1339
PaeI	GCATGC	2 cut(s)	1081, 1339
PaeR7I	CTCGAG	1 cut(s)	314
PagI	TCATGA	1 cut(s)	651
PasI	CCCWGGG	1 cut(s)	127
PceI	AGGCCT	1 cut(s)	935
PcsI	WCGNNNNNNNCGW	6 cut(s)	381, 633, 666, 764, 770, 992
PfeI	GAWTC	2 cut(s)	435, 1200
PflFI	GACNNNGTC	3 cut(s)	263, 380, 641
PflMI	CCANNNNNTGG	2 cut(s)	60, 597
PfoI	TCCNGGA	1 cut(s)	998
PinAI	ACCGGT	1 cut(s)	1557
PkrI	GCNGC	4 cut(s)	321, 692, 850, 1273
Ple19I	CGATCG	1 cut(s)	48
PleI	GAGTC	6 cut(s)	353, 455, 562, 632, 986, 1224
PpsI	GAGTC	6 cut(s)	353, 455, 562, 632, 986, 1224
Psp124BI	GAGCTC	2 cut(s)	737, 1210
Psp6I	CCWGG	5 cut(s)	126, 297, 486, 1070, 1346
PspFI	CCCAGC	1 cut(s)	956
PspGI	CCWGG	5 cut(s)	126, 297, 486, 1070, 1346
PspN4I	GGNNCC	3 cut(s)	1041, 1290, 1345
PspPI	GGNCC	4 cut(s)	66, 502, 702, 1052
PspXI	VCTCGAGB	1 cut(s)	314
PstI	CTGCAG	1 cut(s)	1116
PsuI	RGATCY	2 cut(s)	222, 1714
PsyI	GACNNNGTC	3 cut(s)	263, 380, 641
PvuI	CGATCG	1 cut(s)	48
PvuII	CAGCTG	3 cut(s)	956, 1594, 1772
RsaI	GTAC	5 cut(s)	288, 761, 1465, 1682, 1786
RsaNI	GTAC	5 cut(s)	287, 760, 1464, 1681, 1785
RseI	CAYNNNNRTG	1 cut(s)	1613
SacI	GAGCTC	2 cut(s)	737, 1210
SaqAI	TTAA	2 cut(s)	480, 1388
SatI	GCNGC	4 cut(s)	320, 691, 849, 1272
Sau3AI	GATC	6 cut(s)	45, 222, 784, 1157, 1605, 1714
Sau96I	GGNCC	4 cut(s)	66, 502, 702, 1052
SchI	GAGTC	6 cut(s)	353, 455, 562, 632, 986, 1225
ScrFI	CCNGG	6 cut(s)	128, 299, 488, 1000, 1072, 1348
SduI	GDGCHC	7 cut(s)	737, 1022, 1067, 1136, 1210, 1415, 1704
SfaNI	GCATC	5 cut(s)	406, 498, 612, 1310, 1775
SfcI	CTRYAG	1 cut(s)	1112
Sfr274I	CTCGAG	1 cut(s)	314
SinI	GGWCC	2 cut(s)	502, 702
SlaI	CTCGAG	1 cut(s)	314
SmiMI	CAYNNNNRTG	1 cut(s)	1613
SmlI	CTYRAG	2 cut(s)	137, 314
SmoI	CTYRAG	2 cut(s)	137, 314
SphI	GCATGC	2 cut(s)	1081, 1339
Sse9I	AATT	8 cut(s)	545, 1148, 1170, 1247, 1276, 1321, 1420, 1499
SseBI	AGGCCT	1 cut(s)	935
SspMI	CTAG	2 cut(s)	108, 726
SstI	GAGCTC	2 cut(s)	737, 1210
StuI	AGGCCT	1 cut(s)	935
StyD4I	CCNGG	6 cut(s)	126, 297, 486, 998, 1070, 1346
StyI	CCWWGG	3 cut(s)	446, 978, 1055
TaaI	ACNGT	3 cut(s)	533, 794, 1667
TaiI	ACGT	1 cut(s)	761
TaqI	TCGA	8 cut(s)	44, 48, 315, 339, 395, 464, 764, 1146
TasI	AATT	8 cut(s)	545, 1148, 1170, 1247, 1276, 1321, 1420, 1499
TatI	WGTACW	2 cut(s)	1463, 1784
TauI	GCSGC	2 cut(s)	693, 851
TfiI	GAWTC	2 cut(s)	435, 1200
Tru1I	TTAA	2 cut(s)	480, 1388
Tru9I	TTAA	2 cut(s)	480, 1388
TscAI	CASTG	2 cut(s)	712, 1672
TseFI	GTSAC	4 cut(s)	517, 754, 1503, 1560
TseI	GCWGC	2 cut(s)	319, 1271
Tsp45I	GTSAC	4 cut(s)	517, 754, 1503, 1560
TspDTI	ATGAA	7 cut(s)	640, 667, 1113, 1163, 1512, 1631, 1701
TspGWI	ACGGA	3 cut(s)	73, 505, 1001
TspRI	CASTG	2 cut(s)	712, 1672
Tth111I	GACNNNGTC	3 cut(s)	263, 380, 641
Van91I	CCANNNNNTGG	2 cut(s)	60, 597
VneI	GTGCAC	1 cut(s)	1411
VpaK11BI	GGWCC	2 cut(s)	502, 702
XagI	CCTNNNNNAGG	1 cut(s)	1629
XapI	RAATTY	3 cut(s)	545, 1148, 1247
XceI	RCATGY	2 cut(s)	1081, 1339
XcmI	CCANNNNNNNNNTGG	1 cut(s)	891
XhoI	CTCGAG	1 cut(s)	314
XspI	CTAG	2 cut(s)	108, 726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.