Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0000804

Physical Location & Seq

Genomic Coordinates Reverse (-)

21868656 .. 21872977

Gene Structure 4322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1103900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGCCTCCGCCCCGTCAGCCTCACTCGCACTCTCACCGCCGTTCGATCGACCCCAAAATCTGGAGGGCCTGCGCCGGAAACTCCGTCCAAATCCCCTCCCTCCACTCTAGGGTTTACTACTTCCCTCAGGGCCACCTTGAGCAATCCTCCACCTCCTCCTCCTCCTCCGCCGCCCTCCTATCCCCTCTCCTCCTCTCCAAGCCTCTCATTCTCTGCCGGATCTCCGCCCTCCACTTCCTCGCCGTCCCCACCACTGACGAGGTCTTCGCCAAGCTACTTCTCGTCCCTATTCCCCAGGAGTTCCCCAACCGCGAGCAGCCGAACGGCGAGGAGTTCGACGCCGACGATGGCGGGGACTCGGAACGACAGGACGACAAAGTCGTTTCGTTCGCGAAGATACTGACGCCTTCGGATGCTAACAATGGGGGTGGATTCTCTGTTCCAAGGTTCTGTGCCGACTCTATATTCCCTCCGCTTAACTACCAGGCCGACCCGCCGGTCCAGATGCTTTCCGTCACCGACCTCCACGGCGTTGTTTGGGAATTCCGGCACATATACAGGGGGACTCCGAGACGGCACTTGCTTACCACCGGCTGGAGCAAGTTCGTCAACCACAAGATGCTCGTCGCCGGCGACTCTGTCGTTTTCATGAGGAACGGGAGAGGCGAGATGTTCATCGGCGTCCGCCGCGCCGTTAGGTCCACTGCCAGCTCCGACTGCGCTAGGTTGAGCTCTCAGATAGGAGGCGGAGTGACGTACTCGACGAGGCTGAATACAGAGGATCAGGACTGTTCTGGAGGGAAGGTAATGTCAGCGGAGGCGGTGACCGAAGTGGCGGAGATGGCGGCGGAGGGGAGGCCGTTTGAGGTGGTGTATTATCCAAAAGCGGGTTGGTCGGACTTTGTGGTGAAGGCTGAGGTGGTGGAGAAGGCCTTGAAGGTGTTTTGGACAGCTGGGATGAGAGTGAAGTTGGCCATGGAGACGGAGGACTCGTCCCGGATGACTTGGTTTCAGGGCACTTTGTCAACGGCATCGGTACCGGAAAATGGGCCTTGGCAGAGCTCACCCTGGCGCATGCTTAAGGTTACATGGGATGAACCTGAAGTTCTGCAGAATGCTAAGAGGGTGAGCCCGTGGGAAGTCGAATTTGTTGGACCAACACCTTCAATTCATACTACCTTTTCCCCCACAAAGAGATTCAGAGCTCCTCTGAGTCATGGGCTGTTGACCAATGCAGAGGGAGAATTCTTTTTTCCTATGATGGGAGCAGCTAATTCAGCAATGGTGCCTTTTAGCGCATCCTTGTTGAACTATAACAATTTTCCTGCGGGCATGCAGGGAGCCAGGCAAGATACATTCTGTGTATCTAATCTATCCCACTTGTTAAGTGAAAACACTCCTCAGATGTGCACTTTCAATTCCATTGGCAAAAATGAGGGGCAAAAGTTGAAGAGGGTGTGTACTGAGTTGAACATTGGTAGTTCACAATCTGATGAATTGTCACCAGATAGCCAGAGTAGTGTGCAATCCTTTGGCATGGAACTTGATGGAAACCGGTTGCAGACAAAGGTTGGCAGAAGTTCGTTTCAGCTGTTTGGTAAGATCATTTATATGAACCAGCCTGTTGAAGGTGGTTTTGATGATGTTGGTTGCACCGAGGACAGTGGCAACAAAGGGTACAATGAAACTGAAGAAGGGCACAGCCAACTGGATCTTTCTTTTACCAAACTGATTGATGTTCAATGTCAGAAATCATCAGCTGTTGAAGCTTGTACTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010208 GO:0010468 GO:0010556 GO:0010927 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0022622 GO:0023052 GO:0030198 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033036 GO:0033037 GO:0042221 GO:0042545 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048364 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0051716 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0085029 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_resp B3

Protein Analysis

594

Amino Acids

65.35

Weight (kDa)

5.84

Isoelectric Point (pI)

53.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	130 - 231	2e-22	B3 DNA binding domain
BRWD_AD	PF25313	279 - 384	6e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	301 - 384	3e-27	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77850 AT1G77850 ATMG00940
fragaria_vesca	FvH4_5g38640 FvH4_5g38681 FvH4_5g38690 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_5g38770 FvH4_6g33200
malus_domestica	MD00G1103900.v1.1 MD15G1359400.v1.1
prunus_persica	Prupe.1G507000_v2.0.a1
pyrus_communis	pycom08g14870 pycom15g32180
rosa_chinensis	RchiOBHm_Chr7g0240691
rosa_laevigata	RLG00000000626 RLG00000000646 RLG00000000656 RLG00000000659 RLG00000000668 RLG00000018665
rosa_multiflora	Rmu_co8133848.1_g000001 Rmu_co8172656.1_g000002 Rmu_sc0001483.1_g000002 Rmu_sc0001921.1_g000034 Rmu_sc0002517.1_g000004 Rmu_sc0004799.1_g000003 Rmu_sc0004799.1_g000004 Rmu_sc0011947.1_g000001 Rmu_sc0023480.1_g000003 Rmu_sc0030169.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121890 Rroxscaffold_3G00219660 Rroxscaffold_3G00219860 Rroxscaffold_3G00219880 Rroxscaffold_3G00236300
rosa_rugosa	Rorug02G0236900 Rorug02G0237000 Rorug07G0337600 Rorug07G0338300
rosa_samantha	Rh2AG295100 Rh7AG491700 Rh7AG492100 Rh7AG492900 Rh7BG464200 Rh7BG464600 Rh7BG464900 Rh7CG508200 Rh7CG508500 Rh7CG509100 Rh7CG509700 Rh7CG510000 Rh7CG511300 Rh7DG475700 Rh7DG476000 Rh7DG476700 Rh7DG477300 Rh7DG477600 Rh7DG478100
rosa_wichuraiana	Rw0G013480 Rw7G041210 Rw7G041230 Rw7G041320 Rw7G041490 Rw7G041510 Rw7G041550 Rw7G041690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	377, 497
Acc65I	GGTACC	1 cut(s)	1036
AccB1I	GGYRCC	2 cut(s)	1036, 1285
AccB7I	CCANNNNNTGG	2 cut(s)	60, 594
AccII	CGCG	3 cut(s)	312, 392, 690
AclWI	GGATC	3 cut(s)	227, 789, 1719
AcoI	YGGCCR	1 cut(s)	972
AcsI	RAATTY	3 cut(s)	542, 1145, 1244
AcuI	CTGAAG	2 cut(s)	1122, 1710
AcyI	GRCGYC	3 cut(s)	339, 404, 681
AfaI	GTAC	5 cut(s)	758, 1038, 1462, 1679, 1774
AfiI	CCNNNNNNNGG	7 cut(s)	60, 109, 594, 887, 1046, 1262, 1628
AflII	CTTAAG	1 cut(s)	1079
AgeI	ACCGGT	1 cut(s)	1554
AgsI	TTSAA	9 cut(s)	937, 1167, 1309, 1417, 1450, 1471, 1628, 1742, 1766
AjnI	CCWGG	4 cut(s)	294, 483, 1067, 1343
AloI	GAACNNNNNNTCC	2 cut(s)	423, 455
Alw21I	GWGCWC	4 cut(s)	734, 1064, 1207, 1412
Alw26I	GTCTC	2 cut(s)	565, 974
Alw44I	GTGCAC	1 cut(s)	1408
AlwI	GGATC	3 cut(s)	227, 789, 1719
AoxI	GGCC	7 cut(s)	66, 130, 486, 857, 930, 972, 1049
ApaLI	GTGCAC	1 cut(s)	1408
ApeKI	GCWGC	2 cut(s)	316, 1268
ApoI	RAATTY	3 cut(s)	542, 1145, 1244
ArsI	GACNNNNNNTTYG	2 cut(s)	248, 280
AsiGI	ACCGGT	1 cut(s)	1554
Asp718I	GGTACC	1 cut(s)	1036
AspLEI	GCGC	5 cut(s)	74, 692, 722, 1074, 1298
AspS9I	GGNCC	6 cut(s)	66, 130, 499, 699, 1049, 1154
AsuC2I	CCSGG	1 cut(s)	997
AsuHPI	GGTGA	7 cut(s)	26, 508, 835, 919, 1056, 1138, 1494
AvaII	GGWCC	3 cut(s)	499, 699, 1154
AxyI	CCTNAGG	1 cut(s)	126
BaeGI	GKGCMC	3 cut(s)	1019, 1412, 1701
BalI	TGGCCA	1 cut(s)	974
BanI	GGYRCC	2 cut(s)	1036, 1285
BanII	GRGCYC	4 cut(s)	734, 1064, 1133, 1207
BbsI	GAAGAC	1 cut(s)	256
Bbv12I	GWGCWC	4 cut(s)	734, 1064, 1207, 1412
BbvCI	CCTCAGC	1 cut(s)	915
BbvI	GCAGC	2 cut(s)	328, 1280
BccI	CCATC	4 cut(s)	341, 835, 1255, 1541
BceAI	ACGGC	8 cut(s)	24, 227, 340, 544, 590, 677, 844, 1044
BciT130I	CCWGG	4 cut(s)	296, 485, 1069, 1345
BcnI	CCSGG	1 cut(s)	997
BcoDI	GTCTC	2 cut(s)	565, 974
BfaI	CTAG	2 cut(s)	108, 723
BfmI	CTRYAG	1 cut(s)	1109
BfrI	CTTAAG	1 cut(s)	1079
BisI	GCNGC	5 cut(s)	171, 317, 688, 846, 1269
BlsI	GCNGC	5 cut(s)	172, 318, 689, 847, 1270
Bme1390I	CCNGG	5 cut(s)	296, 485, 997, 1069, 1345
Bme18I	GGWCC	3 cut(s)	499, 699, 1154
BmgT120I	GGNCC	6 cut(s)	66, 130, 499, 699, 1049, 1154
BmiI	GGNNCC	3 cut(s)	1038, 1287, 1342
BmrFI	CCNGG	5 cut(s)	296, 485, 997, 1069, 1345
BmsI	GCATC	5 cut(s)	403, 495, 609, 1040, 1307
BpiI	GAAGAC	1 cut(s)	256
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
BpmI	CTGGAG	3 cut(s)	82, 616, 816
Bpu10I	CCTNAGC	1 cut(s)	915
BpuEI	CTTGAG	1 cut(s)	158
BpuMI	CCSGG	1 cut(s)	997
BsaBI	GATNNNNATC	1 cut(s)	674
BsaHI	GRCGYC	3 cut(s)	339, 404, 681
BsaJI	CCNNGG	8 cut(s)	294, 443, 526, 975, 1052, 1067, 1133, 1656
BsaWI	WCCGGW	2 cut(s)	1039, 1554
BsaXI	ACNNNNNCTCC	6 cut(s)	735, 765, 789, 819, 977, 1007
Bsc4I	CCNNNNNNNGG	7 cut(s)	60, 109, 594, 887, 1046, 1262, 1628
Bse118I	RCCGGY	4 cut(s)	496, 590, 629, 1554
Bse1I	ACTGG	1 cut(s)	1713
Bse21I	CCTNAGG	1 cut(s)	126
Bse3DI	GCAATG	1 cut(s)	1287
Bse8I	GATNNNNATC	1 cut(s)	674
BseBI	CCWGG	4 cut(s)	296, 485, 1069, 1345
BseDI	CCNNGG	8 cut(s)	294, 443, 526, 975, 1052, 1067, 1133, 1656
BseGI	GGATG	5 cut(s)	418, 963, 1005, 1099, 1298
BseJI	GATNNNNATC	1 cut(s)	674
BseLI	CCNNNNNNNGG	7 cut(s)	60, 109, 594, 887, 1046, 1262, 1628
BseMI	GCAATG	1 cut(s)	1287
BseMII	CTCAG	6 cut(s)	140, 749, 906, 1202, 1415, 1455
BseNI	ACTGG	1 cut(s)	1713
BseRI	GAGGAG	9 cut(s)	145, 148, 151, 154, 179, 182, 344, 1197, 1389
BseSI	GKGCMC	3 cut(s)	1019, 1412, 1701
BseXI	GCAGC	2 cut(s)	328, 1280
BseYI	CCCAGC	1 cut(s)	953
Bsh1236I	CGCG	3 cut(s)	312, 392, 690
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	7 cut(s)	68, 132, 488, 859, 932, 974, 1051
BshNI	GGYRCC	2 cut(s)	1036, 1285
BshTI	ACCGGT	1 cut(s)	1554
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	4 cut(s)	734, 1064, 1207, 1412
BsiSI	CCGG	9 cut(s)	75, 217, 497, 547, 591, 630, 997, 1040, 1555
BslFI	GGGAC	5 cut(s)	230, 269, 368, 577, 979
BslI	CCNNNNNNNGG	7 cut(s)	60, 109, 594, 887, 1046, 1262, 1628
BsmAI	GTCTC	2 cut(s)	565, 974
BsmBI	CGTCTC	2 cut(s)	565, 974
BsmFI	GGGAC	5 cut(s)	230, 269, 368, 577, 979
BsmI	GAATGC	1 cut(s)	1120
BsnI	GGCC	7 cut(s)	68, 132, 488, 859, 932, 974, 1051
Bsp1286I	GDGCHC	7 cut(s)	734, 1019, 1064, 1133, 1207, 1412, 1701
Bsp143I	GATC	5 cut(s)	45, 219, 781, 1602, 1711
Bsp19I	CCATGG	1 cut(s)	975
Bsp68I	TCGCGA	1 cut(s)	392
BspANI	GGCC	7 cut(s)	68, 132, 488, 859, 932, 974, 1051
BspCNI	CTCAG	6 cut(s)	139, 748, 907, 1203, 1414, 1456
BspFNI	CGCG	3 cut(s)	312, 392, 690
BspHI	TCATGA	1 cut(s)	648
BspLI	GGNNCC	3 cut(s)	1038, 1287, 1342
BspMAI	CTGCAG	1 cut(s)	1113
BspPI	GGATC	3 cut(s)	227, 789, 1719
BspT107I	GGYRCC	2 cut(s)	1036, 1285
BspTI	CTTAAG	1 cut(s)	1079
BsrDI	GCAATG	1 cut(s)	1287
BsrFI	RCCGGY	4 cut(s)	496, 590, 629, 1554
BsrI	ACTGG	1 cut(s)	1713
BssAI	RCCGGY	4 cut(s)	496, 590, 629, 1554
BssECI	CCNNGG	8 cut(s)	294, 443, 526, 975, 1052, 1067, 1133, 1656
BssMI	GATC	5 cut(s)	45, 219, 781, 1602, 1711
BssNI	GRCGYC	3 cut(s)	339, 404, 681
BssT1I	CCWWGG	3 cut(s)	443, 975, 1052
Bst2UI	CCWGG	4 cut(s)	296, 485, 1069, 1345
Bst4CI	ACNGT	2 cut(s)	791, 1664
Bst6I	CTCTTC	1 cut(s)	1445
BstACI	GRCGYC	3 cut(s)	339, 404, 681
BstAFI	CTTAAG	1 cut(s)	1079
BstC8I	GCNNGC	7 cut(s)	70, 314, 631, 709, 1076, 1330, 1334
BstDEI	CTNAG	7 cut(s)	126, 735, 915, 1119, 1211, 1401, 1464
BstDSI	CCRYGG	3 cut(s)	526, 975, 1133
BstEII	GGTNACC	1 cut(s)	823
BstENI	CCTNNNNNAGG	1 cut(s)	1626
BstF5I	GGATG	5 cut(s)	418, 963, 1005, 1099, 1298
BstFNI	CGCG	3 cut(s)	312, 392, 690
BstHHI	GCGC	5 cut(s)	74, 692, 722, 1074, 1298
BstKTI	GATC	5 cut(s)	48, 222, 784, 1605, 1714
BstMAI	GTCTC	2 cut(s)	565, 974
BstMBI	GATC	5 cut(s)	45, 219, 781, 1602, 1711
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	7 cut(s)	16, 25, 687, 717, 842, 1277, 1766
BstNI	CCWGG	4 cut(s)	296, 485, 1069, 1345
BstNSI	RCATGY	2 cut(s)	1078, 1336
BstPI	GGTNACC	1 cut(s)	823
BstSCI	CCNGG	5 cut(s)	294, 483, 995, 1067, 1343
BstSFI	CTRYAG	1 cut(s)	1109
BstSLI	GKGCMC	3 cut(s)	1019, 1412, 1701
BstUI	CGCG	3 cut(s)	312, 392, 690
BstV1I	GCAGC	2 cut(s)	328, 1280
BstV2I	GAAGAC	1 cut(s)	256
BstX2I	RGATCY	2 cut(s)	219, 1711
BstYI	RGATCY	2 cut(s)	219, 1711
Bsu36I	CCTNAGG	1 cut(s)	126
BsuRI	GGCC	7 cut(s)	68, 132, 488, 859, 932, 974, 1051
BtgI	CCRYGG	3 cut(s)	526, 975, 1133
BtsCI	GGATG	5 cut(s)	418, 963, 1005, 1099, 1298
BtsI	GCAGTG	1 cut(s)	702
BtsIMutI	CAGTG	3 cut(s)	252, 702, 1669
BtuMI	TCGCGA	1 cut(s)	392
Cac8I	GCNNGC	7 cut(s)	70, 314, 631, 709, 1076, 1330, 1334
CciI	TCATGA	1 cut(s)	648
CfoI	GCGC	5 cut(s)	74, 692, 722, 1074, 1298
Cfr10I	RCCGGY	4 cut(s)	496, 590, 629, 1554
Cfr13I	GGNCC	6 cut(s)	66, 130, 499, 699, 1049, 1154
CseI	GACGC	3 cut(s)	347, 412, 670
Csp6I	GTAC	5 cut(s)	757, 1037, 1461, 1678, 1773
CspAI	ACCGGT	1 cut(s)	1554
CspCI	CAANNNNNGTGG	2 cut(s)	409, 444
CviAII	CATG	7 cut(s)	649, 976, 1075, 1089, 1217, 1333, 1537
CviQI	GTAC	5 cut(s)	757, 1037, 1461, 1678, 1773
DdeI	CTNAG	7 cut(s)	126, 735, 915, 1119, 1211, 1401, 1464
DpnI	GATC	5 cut(s)	47, 221, 783, 1604, 1713
DpnII	GATC	5 cut(s)	45, 219, 781, 1602, 1711
DrdI	GACNNNNNNGTC	2 cut(s)	377, 497
DseDI	GACNNNNNNGTC	2 cut(s)	377, 497
EaeI	YGGCCR	1 cut(s)	972
Eam1104I	CTCTTC	1 cut(s)	1445
EarI	CTCTTC	1 cut(s)	1445
EciI	GGCGGA	6 cut(s)	157, 214, 674, 762, 851, 863
Ecl136II	GAGCTC	3 cut(s)	732, 1062, 1205
Eco130I	CCWWGG	3 cut(s)	443, 975, 1052
Eco147I	AGGCCT	1 cut(s)	932
Eco24I	GRGCYC	4 cut(s)	734, 1064, 1133, 1207
Eco47I	GGWCC	3 cut(s)	499, 699, 1154
Eco53kI	GAGCTC	3 cut(s)	732, 1062, 1205
Eco57I	CTGAAG	2 cut(s)	1122, 1710
Eco81I	CCTNAGG	1 cut(s)	126
Eco91I	GGTNACC	1 cut(s)	823
EcoICRI	GAGCTC	3 cut(s)	732, 1062, 1205
EcoNI	CCTNNNNNAGG	1 cut(s)	1626
EcoO109I	RGGNCCY	1 cut(s)	66
EcoO65I	GGTNACC	1 cut(s)	823
EcoRI	GAATTC	2 cut(s)	542, 1244
EcoRII	CCWGG	4 cut(s)	294, 483, 1067, 1343
EcoT14I	CCWWGG	3 cut(s)	443, 975, 1052
EcoT38I	GRGCYC	4 cut(s)	734, 1064, 1133, 1207
ErhI	CCWWGG	3 cut(s)	443, 975, 1052
Esp3I	CGTCTC	2 cut(s)	565, 974
FaeI	CATG	7 cut(s)	652, 979, 1078, 1092, 1220, 1336, 1540
FaqI	GGGAC	5 cut(s)	230, 269, 368, 577, 979
FatI	CATG	7 cut(s)	648, 975, 1074, 1088, 1216, 1332, 1536
FauI	CCCGC	4 cut(s)	344, 501, 880, 1321
Fnu4HI	GCNGC	5 cut(s)	171, 317, 688, 846, 1269
FokI	GGATG	5 cut(s)	425, 970, 1012, 1106, 1285
FriOI	GRGCYC	4 cut(s)	734, 1064, 1133, 1207
Fsp4HI	GCNGC	5 cut(s)	171, 317, 688, 846, 1269
FspBI	CTAG	2 cut(s)	108, 723
GlaI	GCGC	5 cut(s)	73, 691, 721, 1073, 1297
GluI	GCNGC	5 cut(s)	171, 317, 688, 846, 1269
GsaI	CCCAGC	1 cut(s)	957
GsuI	CTGGAG	3 cut(s)	82, 616, 816
HaeIII	GGCC	7 cut(s)	68, 132, 488, 859, 932, 974, 1051
HapII	CCGG	9 cut(s)	75, 217, 497, 547, 591, 630, 997, 1040, 1555
HgaI	GACGC	3 cut(s)	347, 412, 670
HhaI	GCGC	5 cut(s)	74, 692, 722, 1074, 1298
Hin1I	GRCGYC	3 cut(s)	339, 404, 681
Hin1II	CATG	7 cut(s)	652, 979, 1078, 1092, 1220, 1336, 1540
Hin6I	GCGC	5 cut(s)	72, 690, 720, 1072, 1296
HinP1I	GCGC	5 cut(s)	72, 690, 720, 1072, 1296
HincII	GTYRAC	3 cut(s)	610, 1026, 1227
HindII	GTYRAC	3 cut(s)	610, 1026, 1227
HindIII	AAGCTT	1 cut(s)	1767
HinfI	GANTC	8 cut(s)	356, 432, 458, 565, 635, 989, 1197, 1213
HpaII	CCGG	9 cut(s)	75, 217, 497, 547, 591, 630, 997, 1040, 1555
HphI	GGTGA	7 cut(s)	26, 508, 835, 919, 1056, 1138, 1494
Hpy166II	GTNNAC	8 cut(s)	115, 610, 702, 1026, 1227, 1410, 1461, 1484
Hpy188III	TCNNGA	6 cut(s)	61, 391, 502, 649, 785, 795
Hpy8I	GTNNAC	8 cut(s)	115, 610, 702, 1026, 1227, 1410, 1461, 1484
Hpy99I	CGWCG	4 cut(s)	341, 347, 629, 766
HpyAV	CCTTC	8 cut(s)	417, 796, 904, 922, 931, 1173, 1622, 1688
HpyCH4III	ACNGT	2 cut(s)	791, 1664
HpyCH4IV	ACGT	1 cut(s)	755
HpyCH4V	TGCA	7 cut(s)	1111, 1235, 1336, 1410, 1525, 1561, 1653
HpyF10VI	GCNNNNNNNGC	7 cut(s)	16, 25, 687, 717, 842, 1277, 1766
HpyF3I	CTNAG	7 cut(s)	126, 735, 915, 1119, 1211, 1401, 1464
HpySE526I	ACGT	1 cut(s)	755
Hsp92I	GRCGYC	3 cut(s)	339, 404, 681
Hsp92II	CATG	7 cut(s)	652, 979, 1078, 1092, 1220, 1336, 1540
HspAI	GCGC	5 cut(s)	72, 690, 720, 1072, 1296
KpnI	GGTACC	1 cut(s)	1040
KroI	GCCGGC	1 cut(s)	629
KroNI	GCCGGC	1 cut(s)	631
Kzo9I	GATC	5 cut(s)	45, 219, 781, 1602, 1711
LmnI	GCTCC	5 cut(s)	597, 716, 1210, 1265, 1340
Lsp1109I	GCAGC	2 cut(s)	328, 1280
LweI	GCATC	5 cut(s)	403, 495, 609, 1040, 1307
MaeI	CTAG	2 cut(s)	108, 723
MaeII	ACGT	1 cut(s)	755
MaeIII	GTNAC	5 cut(s)	514, 751, 823, 1084, 1500
MalI	GATC	5 cut(s)	47, 221, 783, 1604, 1713
MboI	GATC	5 cut(s)	45, 219, 781, 1602, 1711
MboII	GAAGA	4 cut(s)	256, 406, 1462, 1703
MflI	RGATCY	2 cut(s)	219, 1711
MhlI	GDGCHC	7 cut(s)	734, 1019, 1064, 1133, 1207, 1412, 1701
MlsI	TGGCCA	1 cut(s)	974
MluCI	AATT	8 cut(s)	542, 1145, 1167, 1244, 1273, 1318, 1417, 1496
MluNI	TGGCCA	1 cut(s)	974
MlyI	GAGTC	6 cut(s)	350, 452, 559, 629, 983, 1222
MmeI	TCCRAC	3 cut(s)	738, 876, 1132
Mox20I	TGGCCA	1 cut(s)	974
MreI	CGCCGGCG	1 cut(s)	629
MroNI	GCCGGC	1 cut(s)	629
MscI	TGGCCA	1 cut(s)	974
MseI	TTAA	3 cut(s)	477, 1080, 1385
MslI	CAYNNNNRTG	1 cut(s)	1610
Msp20I	TGGCCA	1 cut(s)	974
MspA1I	CMGCKG	4 cut(s)	815, 953, 1591, 1760
MspCI	CTTAAG	1 cut(s)	1079
MspI	CCGG	9 cut(s)	75, 217, 497, 547, 591, 630, 997, 1040, 1555
MspR9I	CCNGG	5 cut(s)	296, 485, 997, 1069, 1345
Mva1269I	GAATGC	1 cut(s)	1120
MvaI	CCWGG	4 cut(s)	296, 485, 1069, 1345
MvnI	CGCG	3 cut(s)	312, 392, 690
MwoI	GCNNNNNNNGC	7 cut(s)	16, 25, 687, 717, 842, 1277, 1766
NaeI	GCCGGC	1 cut(s)	631
NciI	CCSGG	1 cut(s)	997
NcoI	CCATGG	1 cut(s)	975
NdeII	GATC	5 cut(s)	45, 219, 781, 1602, 1711
NgoMIV	GCCGGC	1 cut(s)	629
NlaIII	CATG	7 cut(s)	652, 979, 1078, 1092, 1220, 1336, 1540
NlaIV	GGNNCC	3 cut(s)	1038, 1287, 1342
NmuCI	GTSAC	4 cut(s)	514, 751, 823, 1500
NruI	TCGCGA	1 cut(s)	392
NspI	RCATGY	2 cut(s)	1078, 1336
PaeI	GCATGC	2 cut(s)	1078, 1336
PagI	TCATGA	1 cut(s)	648
PceI	AGGCCT	1 cut(s)	932
PcsI	WCGNNNNNNNCGW	6 cut(s)	342, 378, 630, 663, 761, 989
PctI	GAATGC	1 cut(s)	1120
PdiI	GCCGGC	1 cut(s)	631
PfeI	GAWTC	2 cut(s)	432, 1197
PflFI	GACNNNGTC	3 cut(s)	260, 377, 638
PflMI	CCANNNNNTGG	2 cut(s)	60, 594
PfoI	TCCNGGA	1 cut(s)	995
PinAI	ACCGGT	1 cut(s)	1554
PkrI	GCNGC	5 cut(s)	172, 318, 689, 847, 1270
Ple19I	CGATCG	1 cut(s)	48
PleI	GAGTC	6 cut(s)	350, 452, 559, 629, 983, 1221
PpsI	GAGTC	6 cut(s)	350, 452, 559, 629, 983, 1221
Psp124BI	GAGCTC	3 cut(s)	734, 1064, 1207
Psp6I	CCWGG	4 cut(s)	294, 483, 1067, 1343
PspEI	GGTNACC	1 cut(s)	823
PspFI	CCCAGC	1 cut(s)	953
PspGI	CCWGG	4 cut(s)	294, 483, 1067, 1343
PspN4I	GGNNCC	3 cut(s)	1038, 1287, 1342
PspPI	GGNCC	6 cut(s)	66, 130, 499, 699, 1049, 1154
PstI	CTGCAG	1 cut(s)	1113
PsuI	RGATCY	2 cut(s)	219, 1711
PsyI	GACNNNGTC	3 cut(s)	260, 377, 638
PvuI	CGATCG	1 cut(s)	48
PvuII	CAGCTG	3 cut(s)	953, 1591, 1760
RruI	TCGCGA	1 cut(s)	392
RsaI	GTAC	5 cut(s)	758, 1038, 1462, 1679, 1774
RsaNI	GTAC	5 cut(s)	757, 1037, 1461, 1678, 1773
RseI	CAYNNNNRTG	1 cut(s)	1610
SacI	GAGCTC	3 cut(s)	734, 1064, 1207
SaqAI	TTAA	3 cut(s)	477, 1080, 1385
SatI	GCNGC	5 cut(s)	171, 317, 688, 846, 1269
Sau3AI	GATC	5 cut(s)	45, 219, 781, 1602, 1711
Sau96I	GGNCC	6 cut(s)	66, 130, 499, 699, 1049, 1154
SchI	GAGTC	6 cut(s)	350, 452, 559, 629, 983, 1222
ScrFI	CCNGG	5 cut(s)	296, 485, 997, 1069, 1345
SduI	GDGCHC	7 cut(s)	734, 1019, 1064, 1133, 1207, 1412, 1701
SfaNI	GCATC	5 cut(s)	403, 495, 609, 1040, 1307
SfcI	CTRYAG	1 cut(s)	1109
SgrAI	CRCCGGYG	1 cut(s)	629
SinI	GGWCC	3 cut(s)	499, 699, 1154
SmiMI	CAYNNNNRTG	1 cut(s)	1610
SmlI	CTYRAG	2 cut(s)	137, 1079
SmoI	CTYRAG	2 cut(s)	137, 1079
SphI	GCATGC	2 cut(s)	1078, 1336
Sse9I	AATT	8 cut(s)	542, 1145, 1167, 1244, 1273, 1318, 1417, 1496
SseBI	AGGCCT	1 cut(s)	932
SspMI	CTAG	2 cut(s)	108, 723
SstI	GAGCTC	3 cut(s)	734, 1064, 1207
StuI	AGGCCT	1 cut(s)	932
StyD4I	CCNGG	5 cut(s)	294, 483, 995, 1067, 1343
StyI	CCWWGG	3 cut(s)	443, 975, 1052
TaaI	ACNGT	2 cut(s)	791, 1664
TaiI	ACGT	1 cut(s)	758
TaqI	TCGA	5 cut(s)	44, 48, 336, 761, 1143
TaqII	GACCGA	1 cut(s)	842
TasI	AATT	8 cut(s)	542, 1145, 1167, 1244, 1273, 1318, 1417, 1496
TatI	WGTACW	2 cut(s)	1460, 1772
TauI	GCSGC	3 cut(s)	173, 690, 848
TfiI	GAWTC	2 cut(s)	432, 1197
Tru1I	TTAA	3 cut(s)	477, 1080, 1385
Tru9I	TTAA	3 cut(s)	477, 1080, 1385
TscAI	CASTG	3 cut(s)	259, 709, 1669
TseFI	GTSAC	4 cut(s)	514, 751, 823, 1500
TseI	GCWGC	2 cut(s)	316, 1268
Tsp45I	GTSAC	4 cut(s)	514, 751, 823, 1500
TspDTI	ATGAA	7 cut(s)	637, 664, 1110, 1160, 1509, 1628, 1698
TspGWI	ACGGA	3 cut(s)	73, 502, 998
TspRI	CASTG	3 cut(s)	259, 709, 1669
Tth111I	GACNNNGTC	3 cut(s)	260, 377, 638
Van91I	CCANNNNNTGG	2 cut(s)	60, 594
Vha464I	CTTAAG	1 cut(s)	1079
VneI	GTGCAC	1 cut(s)	1408
VpaK11BI	GGWCC	3 cut(s)	499, 699, 1154
XagI	CCTNNNNNAGG	1 cut(s)	1626
XapI	RAATTY	3 cut(s)	542, 1145, 1244
XceI	RCATGY	2 cut(s)	1078, 1336
XcmI	CCANNNNNNNNNTGG	1 cut(s)	888
XspI	CTAG	2 cut(s)	108, 723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.