FvH4_7g08970

Metacaspase-1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000588
Physical Location & Seq
Reverse (-)
8773803 .. 8777097
3295 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08970.t1

Sequence Viewer

Length: 1146 bp
ATGTACAGCAACATGCTGGTCAACTGCTCCAACTGCCGCACCCCGCTCCAGATTCCGCCGGGCGCCGAGTCCATCCGCTGCGCCCTCTGCCAGGCCGTCACCATCATCGGCGACCCACGCGCCCTCCACTCAGCTCCCTCCTCCCACGAGCCCCCACCTCCCGCTCCGTACGGCCACCACGCGCCCCCGCCTCCCTCGCCCTACAACCACGCGCCGCCGGGTCCGCCGCCGAACGTGCACGGCCGGAAGAAGGCGGTGATCTGCGGGATATCGTACAAGTACTCGAGGCATGAGCTCAAGGGTTGCATCAATGACGCCAAATGCATGAAGTACCTCCTCATCAACAAGTTCAAGTTTCCAGAAGATTCCATTGTTATGCTCACTGAAGAAGAAACTCACCCAGCTAAGATTCCAAATAAATACAACCTCAGAATGGCATTACATTGGCTTGTACAAGGATGTCAACCAGGTGACTCCCTTCTGTTTCACTACTCTGGTCATGGTTCACGGCAGAGGGATTATCGTGGGGATGAAGTCGATGGATATGATGAAACTCTTTGCCCCCTTGACTTTGAAACCCAGGGTATGATTGTTGATGATGAGATAAATGCAGCAATTGTTAGGCCCATTCCACATGGGGTCAAGCTTCATGCAATTATAGACTCTTGTCATAGTGGCACCGTACTGGATTTGCCATTCCTTTGCAGAATGGACAGGGGTGGAAAATATGTATGGGAGGATCACCGCCCTCGATCCGGCGAATGGAAAGGAACAAGTGGTGGAGAAGTTATATCTATCAGTGGTTGTGATGACAATCAAACCTCTGCTGATACATCAGCTCTATCCAAGATCACGTCAACAGGTGCCATGACTTTCTGCTTCATCCAAGCCATCGAGCAAGGACACGCAGCCACATATGGGAGCATACTAAATGCTATGCGAAATACCATTCGAAATACGGGTTCTGGTGGTGGTGGTCCTGGCAGTGCTGTTACGTCTCTCCTTGGTGGTAGTAGTGGTGCTGTTACATCGCTTGTCGGCATGCTTCTAACAGGCGGAAGTGTTGGTGGTGGTGGGCTAAGACAGGAGCCTCAATTAACTGCCTGCGAGCCATTCGATGTGTACACAAAACCTTTCACCCTATGA

Protein Analysis

382

Amino Acids

40.91

Weight (kDa)

6.45

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-LSD1 PF06943 9 - 33 4.9e-10 LSD1 zinc finger
Peptidase_C14 PF00656 82 - 320 2.2e-34 Caspase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000588)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02170
fragaria_vesca FvH4_7g08970 FvH4_7g08970 FvH4_7g08970 FvH4_7g26490
malus_domestica MD01G1173500.v1.1 MD02G1221900.v1.1 MD05G1044000.v1.1 MD07G1094600.v1.1 MD07G1240400.v1.1 MD07G1240500.v1.1 MD10G1051100.v1.1 MD10G1051200.v1.1
prunus_persica Prupe.2G118900_v2.0.a1 Prupe.2G269200_v2.0.a1 Prupe.8G059400_v2.0.a1
pyrus_communis pycom01g18530 pycom01g18540 pycom02g18780 pycom05g03650 pycom07g07790 pycom07g21680 pycom10g03590
rosa_chinensis RchiOBHm_Chr1g0344331 RchiOBHm_Chr1g0344461 RchiOBHm_Chr1g0344571 RchiOBHm_Chr1g0344661 RchiOBHm_Chr1g0344751 RchiOBHm_Chr1g0344811 RchiOBHm_Chr1g0344881 RchiOBHm_Chr1g0344901 RchiOBHm_Chr1g0344911 RchiOBHm_Chr1g0373091
rosa_laevigata RLG00000028867 RLG00000028877 RLG00000028880 RLG00000028885 RLG00000028898
rosa_multiflora Rmu_co8105290.1_g000001 Rmu_co8220756.1_g000001 Rmu_co8317965.1_g000001 Rmu_co8413861.1_g000001 Rmu_co8518347.1_g000001 Rmu_sc0000390.1_g000001 Rmu_sc0005177.1_g000002 Rmu_sc0007317.1_g000002 Rmu_sc0010876.1_g000003 Rmu_sc0013714.1_g000001 Rmu_sc0029558.1_g000002 Rmu_ssc0000167.1_g000004
rosa_roxburghii Rroxscaffold_4G00284470 Rroxscaffold_4G00309530 Rroxscaffold_4G00309580 Rroxscaffold_4G00309590 Rroxscaffold_4G00309620 Rroxscaffold_4G00309630 Rroxscaffold_4G00309720 Rroxscaffold_4G00309880
rosa_rugosa Rorug01G0173200 Rorug01G0173200 Rorug01G0174300 Rorug01G0174300 Rorug01G0174300 Rorug01G0174900 Rorug01G0376100
rosa_samantha Rh1CG175000 Rh1CG176200 Rh1CG177200 Rh1CG177800 Rh1CG177900 Rh1CG178000 Rh1CG361900 Rh1DG188500 Rh1DG188700 Rh1DG189400 Rh1DG379400
rosa_wichuraiana Rw1G015680 Rw1G015800 Rw1G015810 Rw1G015870 Rw1G033900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 62, 677, 863
AccBSI CCGCTC 2 cut(s) 46, 164
AccII CGCG 3 cut(s) 120, 182, 212
AclWI GGATC 2 cut(s) 747, 747
AcoI YGGCCR 2 cut(s) 172, 241
AcuI CTGAAG 1 cut(s) 405
AcyI GRCGYC 2 cut(s) 63, 315
AfaI GTAC 8 cut(s) 5, 170, 275, 281, 332, 453, 684, 1124
AfiI CCNNNNNNNGG 6 cut(s) 91, 250, 433, 755, 762, 918
AgsI TTSAA 2 cut(s) 352, 575
AjiI CACGTC 1 cut(s) 855
AjnI CCWGG 4 cut(s) 90, 466, 579, 979
AluBI AGCT 5 cut(s) 134, 295, 404, 646, 839
AluI AGCT 5 cut(s) 134, 295, 404, 646, 839
Alw21I GWGCWC 2 cut(s) 240, 297
Alw26I GTCTC 1 cut(s) 1002
Alw44I GTGCAC 1 cut(s) 236
AlwI GGATC 2 cut(s) 747, 747
Ama87I CYCGRG 1 cut(s) 283
AoxI GGCC 4 cut(s) 93, 172, 241, 623
ApaLI GTGCAC 1 cut(s) 236
ApeKI GCWGC 3 cut(s) 78, 611, 908
AspLEI GCGC 5 cut(s) 65, 83, 122, 184, 214
AspS9I GGNCC 3 cut(s) 221, 624, 977
AsuC2I CCSGG 2 cut(s) 60, 219
AsuHPI GGTGA 6 cut(s) 91, 268, 389, 482, 734, 1129
AsuII TTCGAA 1 cut(s) 952
AvaI CYCGRG 1 cut(s) 283
AvaII GGWCC 2 cut(s) 221, 977
BaeGI GKGCMC 1 cut(s) 240
BanI GGYRCC 3 cut(s) 62, 677, 863
BanII GRGCYC 2 cut(s) 153, 297
BauI CACGAG 1 cut(s) 146
Bbv12I GWGCWC 2 cut(s) 240, 297
BbvI GCAGC 3 cut(s) 65, 623, 920
BccI CCATC 4 cut(s) 80, 110, 533, 899
BceAI ACGGC 4 cut(s) 80, 187, 256, 524
BciT130I CCWGG 4 cut(s) 92, 468, 581, 981
BcnI CCSGG 2 cut(s) 60, 219
BcoDI GTCTC 1 cut(s) 1002
BfoI RGCGCY 1 cut(s) 66
BisI GCNGC 6 cut(s) 37, 79, 215, 227, 612, 909
BlsI GCNGC 6 cut(s) 38, 80, 216, 228, 613, 910
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 6 cut(s) 60, 92, 219, 468, 581, 981
Bme18I GGWCC 2 cut(s) 221, 977
BmeT110I CYCGRG 1 cut(s) 283
BmgBI CACGTC 1 cut(s) 855
BmgT120I GGNCC 3 cut(s) 221, 624, 977
BmiI GGNNCC 5 cut(s) 64, 222, 679, 865, 1089
BmrFI CCNGG 6 cut(s) 60, 92, 219, 468, 581, 981
BmsI GCATC 1 cut(s) 315
BoxI GACNNNNGTC 1 cut(s) 666
BpmI CTGGAG 1 cut(s) 32
Bpu14I TTCGAA 1 cut(s) 952
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 2 cut(s) 60, 219
BsaBI GATNNNNATC 1 cut(s) 813
BsaHI GRCGYC 2 cut(s) 63, 315
BsaJI CCNNGG 3 cut(s) 579, 580, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 108, 138
Bsc4I CCNNNNNNNGG 6 cut(s) 91, 250, 433, 755, 762, 918
Bse1I ACTGG 1 cut(s) 690
Bse8I GATNNNNATC 1 cut(s) 813
BseBI CCWGG 4 cut(s) 92, 468, 581, 981
BseDI CCNNGG 3 cut(s) 579, 580, 1003
BseGI GGATG 4 cut(s) 72, 464, 535, 882
BseJI GATNNNNATC 1 cut(s) 813
BseLI CCNNNNNNNGG 6 cut(s) 91, 250, 433, 755, 762, 918
BseMII CTCAG 2 cut(s) 144, 442
BseNI ACTGG 1 cut(s) 690
BseRI GAGGAG 2 cut(s) 130, 326
BseSI GKGCMC 1 cut(s) 240
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 3 cut(s) 65, 623, 920
BseYI CCCAGC 1 cut(s) 400
Bsh1236I CGCG 3 cut(s) 120, 182, 212
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 4 cut(s) 95, 174, 243, 625
BshNI GGYRCC 3 cut(s) 62, 677, 863
BsiEI CGRYCG 1 cut(s) 244
BsiHKAI GWGCWC 2 cut(s) 240, 297
BsiHKCI CYCGRG 1 cut(s) 283
BsiSI CCGG 4 cut(s) 59, 218, 244, 756
BsiWI CGTACG 1 cut(s) 168
BslI CCNNNNNNNGG 6 cut(s) 91, 250, 433, 755, 762, 918
BsmAI GTCTC 1 cut(s) 1002
BsmBI CGTCTC 1 cut(s) 1002
BsnI GGCC 4 cut(s) 95, 174, 243, 625
BsoBI CYCGRG 1 cut(s) 283
Bsp119I TTCGAA 1 cut(s) 952
Bsp1286I GDGCHC 3 cut(s) 153, 240, 297
Bsp1407I TGTACA 3 cut(s) 3, 451, 1122
Bsp143I GATC 4 cut(s) 258, 739, 752, 849
BspANI GGCC 4 cut(s) 95, 174, 243, 625
BspCNI CTCAG 2 cut(s) 143, 441
BspFNI CGCG 3 cut(s) 120, 182, 212
BspLI GGNNCC 5 cut(s) 64, 222, 679, 865, 1089
BspPI GGATC 2 cut(s) 747, 747
BspT104I TTCGAA 1 cut(s) 952
BspT107I GGYRCC 3 cut(s) 62, 677, 863
BsrBI CCGCTC 2 cut(s) 46, 164
BsrGI TGTACA 3 cut(s) 3, 451, 1122
BsrI ACTGG 1 cut(s) 690
BssECI CCNNGG 3 cut(s) 579, 580, 1003
BssMI GATC 4 cut(s) 258, 739, 752, 849
BssNI GRCGYC 2 cut(s) 63, 315
BssSI CACGAG 1 cut(s) 146
BssT1I CCWWGG 1 cut(s) 1003
Bst2BI CACGAG 1 cut(s) 146
Bst2UI CCWGG 4 cut(s) 92, 468, 581, 981
Bst4CI ACNGT 1 cut(s) 682
BstACI GRCGYC 2 cut(s) 63, 315
BstAUI TGTACA 3 cut(s) 3, 451, 1122
BstBI TTCGAA 1 cut(s) 952
BstC8I GCNNGC 3 cut(s) 1043, 1105, 1109
BstDEI CTNAG 4 cut(s) 130, 405, 428, 1079
BstENI CCTNNNNNAGG 1 cut(s) 89
BstF5I GGATG 4 cut(s) 72, 464, 535, 882
BstFNI CGCG 3 cut(s) 120, 182, 212
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 5 cut(s) 65, 83, 122, 184, 214
BstKTI GATC 4 cut(s) 261, 742, 755, 852
BstMAI GTCTC 1 cut(s) 1002
BstMBI GATC 4 cut(s) 258, 739, 752, 849
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 6 cut(s) 33, 87, 117, 196, 223, 235
BstNI CCWGG 4 cut(s) 92, 468, 581, 981
BstNSI RCATGY 2 cut(s) 16, 1045
BstPAI GACNNNNGTC 1 cut(s) 666
BstSCI CCNGG 6 cut(s) 58, 90, 217, 466, 579, 979
BstSLI GKGCMC 1 cut(s) 240
BstUI CGCG 3 cut(s) 120, 182, 212
BstV1I GCAGC 3 cut(s) 65, 623, 920
BstZI CGGCCG 1 cut(s) 241
BsuRI GGCC 4 cut(s) 95, 174, 243, 625
BtgZI GCGATG 1 cut(s) 1014
BtrI CACGTC 1 cut(s) 855
BtsCI GGATG 4 cut(s) 72, 464, 535, 882
BtsI GCAGTG 1 cut(s) 991
BtsIMutI CAGTG 3 cut(s) 381, 805, 991
Cac8I GCNNGC 3 cut(s) 1043, 1105, 1109
CfoI GCGC 5 cut(s) 65, 83, 122, 184, 214
Cfr13I GGNCC 3 cut(s) 221, 624, 977
CseI GACGC 1 cut(s) 323
CsiI ACCWGGT 1 cut(s) 466
Csp6I GTAC 8 cut(s) 4, 169, 274, 280, 331, 452, 683, 1123
CviAII CATG 8 cut(s) 13, 290, 325, 500, 635, 650, 868, 1042
CviQI GTAC 8 cut(s) 4, 169, 274, 280, 331, 452, 683, 1123
DdeI CTNAG 4 cut(s) 130, 405, 428, 1079
DinI GGCGCC 1 cut(s) 64
DpnI GATC 4 cut(s) 260, 741, 754, 851
DpnII GATC 4 cut(s) 258, 739, 752, 849
EaeI YGGCCR 2 cut(s) 172, 241
EagI CGGCCG 1 cut(s) 241
EciI GGCGGA 3 cut(s) 45, 213, 1071
Ecl136II GAGCTC 1 cut(s) 295
EclXI CGGCCG 1 cut(s) 241
Eco130I CCWWGG 1 cut(s) 1003
Eco24I GRGCYC 2 cut(s) 153, 297
Eco32I GATATC 1 cut(s) 270
Eco47I GGWCC 2 cut(s) 221, 977
Eco52I CGGCCG 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 295
Eco57I CTGAAG 1 cut(s) 405
Eco88I CYCGRG 1 cut(s) 283
EcoICRI GAGCTC 1 cut(s) 295
EcoNI CCTNNNNNAGG 1 cut(s) 89
EcoRII CCWGG 4 cut(s) 90, 466, 579, 979
EcoRV GATATC 1 cut(s) 270
EcoT14I CCWWGG 1 cut(s) 1003
EcoT22I ATGCAT 1 cut(s) 326
EcoT38I GRGCYC 2 cut(s) 153, 297
EgeI GGCGCC 1 cut(s) 64
EheI GGCGCC 1 cut(s) 64
ErhI CCWWGG 1 cut(s) 1003
Esp3I CGTCTC 1 cut(s) 1002
FaeI CATG 8 cut(s) 16, 293, 328, 503, 638, 653, 871, 1045
FatI CATG 8 cut(s) 12, 289, 324, 499, 634, 649, 867, 1041
FauI CCCGC 4 cut(s) 51, 169, 195, 257
FauNDI CATATG 1 cut(s) 916
Fnu4HI GCNGC 6 cut(s) 37, 79, 215, 227, 612, 909
FokI GGATG 4 cut(s) 59, 471, 542, 869
FriOI GRGCYC 2 cut(s) 153, 297
Fsp4HI GCNGC 6 cut(s) 37, 79, 215, 227, 612, 909
GlaI GCGC 5 cut(s) 64, 82, 121, 183, 213
GluI GCNGC 6 cut(s) 37, 79, 215, 227, 612, 909
GsaI CCCAGC 1 cut(s) 404
GsuI CTGGAG 1 cut(s) 32
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 4 cut(s) 95, 174, 243, 625
HapII CCGG 4 cut(s) 59, 218, 244, 756
HgaI GACGC 1 cut(s) 323
HhaI GCGC 5 cut(s) 65, 83, 122, 184, 214
Hin1I GRCGYC 2 cut(s) 63, 315
Hin1II CATG 8 cut(s) 16, 293, 328, 503, 638, 653, 871, 1045
Hin6I GCGC 5 cut(s) 63, 81, 120, 182, 212
HinP1I GCGC 5 cut(s) 63, 81, 120, 182, 212
HincII GTYRAC 3 cut(s) 22, 464, 858
HindII GTYRAC 3 cut(s) 22, 464, 858
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 6 cut(s) 52, 68, 365, 409, 473, 662
HpaII CCGG 4 cut(s) 59, 218, 244, 756
HphI GGTGA 6 cut(s) 91, 268, 389, 482, 734, 1129
Hpy166II GTNNAC 7 cut(s) 22, 238, 464, 506, 858, 1123, 1125
Hpy188I TCNGA 1 cut(s) 431
Hpy188III TCNNGA 2 cut(s) 49, 359
Hpy8I GTNNAC 7 cut(s) 22, 238, 464, 506, 858, 1123, 1125
HpyAV CCTTC 2 cut(s) 244, 488
HpyCH4III ACNGT 1 cut(s) 682
HpyCH4IV ACGT 3 cut(s) 234, 854, 995
HpyCH4V TGCA 6 cut(s) 238, 306, 324, 611, 653, 705
HpyF10VI GCNNNNNNNGC 6 cut(s) 33, 87, 117, 196, 223, 235
HpyF3I CTNAG 4 cut(s) 130, 405, 428, 1079
HpySE526I ACGT 3 cut(s) 234, 854, 995
Hsp92I GRCGYC 2 cut(s) 63, 315
Hsp92II CATG 8 cut(s) 16, 293, 328, 503, 638, 653, 871, 1045
HspAI GCGC 5 cut(s) 63, 81, 120, 182, 212
KasI GGCGCC 1 cut(s) 62
Kzo9I GATC 4 cut(s) 258, 739, 752, 849
LmnI GCTCC 6 cut(s) 32, 51, 139, 169, 921, 1087
Lsp1109I GCAGC 3 cut(s) 65, 623, 920
LweI GCATC 1 cut(s) 315
MabI ACCWGGT 1 cut(s) 466
MaeII ACGT 3 cut(s) 234, 854, 995
MaeIII GTNAC 4 cut(s) 97, 470, 991, 1024
MalI GATC 4 cut(s) 260, 741, 754, 851
MbiI CCGCTC 2 cut(s) 46, 164
MboI GATC 4 cut(s) 258, 739, 752, 849
MboII GAAGA 4 cut(s) 259, 374, 398, 401
MfeI CAATTG 1 cut(s) 615
MhlI GDGCHC 3 cut(s) 153, 240, 297
MluCI AATT 3 cut(s) 615, 654, 1094
Mly113I GGCGCC 1 cut(s) 63
MlyI GAGTC 3 cut(s) 77, 467, 656
MmeI TCCRAC 1 cut(s) 54
Mph1103I ATGCAT 1 cut(s) 326
MseI TTAA 1 cut(s) 1097
MslI CAYNNNNRTG 1 cut(s) 374
MspA1I CMGCKG 1 cut(s) 78
MspI CCGG 4 cut(s) 59, 218, 244, 756
MspR9I CCNGG 6 cut(s) 60, 92, 219, 468, 581, 981
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 4 cut(s) 92, 468, 581, 981
MvnI CGCG 3 cut(s) 120, 182, 212
MwoI GCNNNNNNNGC 6 cut(s) 33, 87, 117, 196, 223, 235
NarI GGCGCC 1 cut(s) 63
NciI CCSGG 2 cut(s) 60, 219
NdeI CATATG 1 cut(s) 916
NdeII GATC 4 cut(s) 258, 739, 752, 849
NlaIII CATG 8 cut(s) 16, 293, 328, 503, 638, 653, 871, 1045
NlaIV GGNNCC 5 cut(s) 64, 222, 679, 865, 1089
NmeAIII GCCGAG 1 cut(s) 91
NmuCI GTSAC 2 cut(s) 97, 470
NsiI ATGCAT 1 cut(s) 326
NspI RCATGY 2 cut(s) 16, 1045
NspV TTCGAA 1 cut(s) 952
PaeI GCATGC 1 cut(s) 1045
PaeR7I CTCGAG 1 cut(s) 283
PasI CCCWGGG 1 cut(s) 580
PfeI GAWTC 3 cut(s) 52, 365, 409
Pfl23II CGTACG 1 cut(s) 168
PkrI GCNGC 6 cut(s) 38, 80, 216, 228, 613, 910
PleI GAGTC 3 cut(s) 76, 467, 656
PluTI GGCGCC 1 cut(s) 66
PpsI GAGTC 3 cut(s) 76, 467, 656
PshAI GACNNNNGTC 1 cut(s) 666
Psp124BI GAGCTC 1 cut(s) 297
Psp6I CCWGG 4 cut(s) 90, 466, 579, 979
PspFI CCCAGC 1 cut(s) 400
PspGI CCWGG 4 cut(s) 90, 466, 579, 979
PspLI CGTACG 1 cut(s) 168
PspN4I GGNNCC 5 cut(s) 64, 222, 679, 865, 1089
PspPI GGNCC 3 cut(s) 221, 624, 977
PspXI VCTCGAGB 1 cut(s) 283
RsaI GTAC 8 cut(s) 5, 170, 275, 281, 332, 453, 684, 1124
RsaNI GTAC 8 cut(s) 4, 169, 274, 280, 331, 452, 683, 1123
RseI CAYNNNNRTG 1 cut(s) 374
SacI GAGCTC 1 cut(s) 297
SaqAI TTAA 1 cut(s) 1097
SatI GCNGC 6 cut(s) 37, 79, 215, 227, 612, 909
Sau3AI GATC 4 cut(s) 258, 739, 752, 849
Sau96I GGNCC 3 cut(s) 221, 624, 977
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 3 cut(s) 77, 467, 656
ScrFI CCNGG 6 cut(s) 60, 92, 219, 468, 581, 981
SduI GDGCHC 3 cut(s) 153, 240, 297
SexAI ACCWGGT 1 cut(s) 466
SfaNI GCATC 1 cut(s) 315
SfoI GGCGCC 1 cut(s) 64
Sfr274I CTCGAG 1 cut(s) 283
SfuI TTCGAA 1 cut(s) 952
SinI GGWCC 2 cut(s) 221, 977
SlaI CTCGAG 1 cut(s) 283
SmiMI CAYNNNNRTG 1 cut(s) 374
SmlI CTYRAG 2 cut(s) 283, 296
SmoI CTYRAG 2 cut(s) 283, 296
SphI GCATGC 1 cut(s) 1045
Sse9I AATT 3 cut(s) 615, 654, 1094
SspDI GGCGCC 1 cut(s) 62
SstI GAGCTC 1 cut(s) 297
StyD4I CCNGG 6 cut(s) 58, 90, 217, 466, 579, 979
StyI CCWWGG 1 cut(s) 1003
TaaI ACNGT 1 cut(s) 682
TaiI ACGT 3 cut(s) 237, 857, 998
TaqI TCGA 6 cut(s) 284, 537, 751, 894, 952, 1116
TasI AATT 3 cut(s) 615, 654, 1094
TatI WGTACW 4 cut(s) 3, 279, 451, 1122
TauI GCSGC 3 cut(s) 39, 217, 229
TfiI GAWTC 3 cut(s) 52, 365, 409
Tru1I TTAA 1 cut(s) 1097
Tru9I TTAA 1 cut(s) 1097
TscAI CASTG 3 cut(s) 388, 805, 991
TseFI GTSAC 2 cut(s) 97, 470
TseI GCWGC 3 cut(s) 78, 611, 908
Tsp45I GTSAC 2 cut(s) 97, 470
TspDTI ATGAA 5 cut(s) 341, 546, 564, 638, 871
TspGWI ACGGA 1 cut(s) 156
TspRI CASTG 3 cut(s) 388, 805, 991
VneI GTGCAC 1 cut(s) 236
VpaK11BI GGWCC 2 cut(s) 221, 977
XagI CCTNNNNNAGG 1 cut(s) 89
XceI RCATGY 2 cut(s) 16, 1045
XhoI CTCGAG 1 cut(s) 283
ZrmI AGTACT 1 cut(s) 281
Zsp2I ATGCAT 1 cut(s) 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.