Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000588

Physical Location & Seq

Genomic Coordinates Forward (+)

31501352 .. 31504518

Gene Structure 3167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00309720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGTACAGCAATATGCTGGTGAACTGCTCCAACTGCAACACCCCGCTCCAGCTTCCGTCGGGCGCTCAGTCGATCCGCTGCGCCCTCTGCCAGGCCGTCACCCTAATCGCGGACCCACGCTCCCTGCACTCACTTCCCTCCTCCCACGCGCTCCCACCTCCCTCTCCTTACGGCCACGCGTCTCCCCCTCCTCCTCCATCGCCCTACAACCACGCGCCGCCGGGGCCTCCGCCGAGCGTGCACGGCCGGAAGAAGGCGGTGATCTGCGGGATATCGTATAACTACTCGAGGCATGAGCTCAAGGGTTGCATCAATGACGCCAAATGCATGCGGTATCTCCTCATCAACAAGTTCAAGTTTCCCGACGAATCCATTGTCATGCTCACTGAAGAAGAAACTCACCCAGCTAAGATTCCAAATAAATACAACATTAGAATGGCATTACATTGGCTTGTACAAGGATGCCAACCAGGTGACTCCCTTGTGTTTCACTACTCTGGTCATGGTTCACGGCAGAGGGCTTATCATGATGATGAAGTTGATGGATATGATGAAACCCTTTGTCCCCTTGACTTCGAAACCCAGGGTATGATTGTCGATGATGAGATAAATGCAACAATTGTTAGGCCCCTTCCACATGGGGTCAAGCTTCATGCAATTATAGACTCCTGTCATAGTGGCACTGTACTGGATTTGCCATTCCTTTGCAGAATGGACAGGAGTGGAAAATATGTATGGGAGGATCATCGCCCTCGATCAGGCATGTGGAAAGGAACAAGTGGTGGAGAAGTTATATCTATCAGTGGTTGTGATGACGATCAAACCTCTGCTGATACATCAGCTCTATCCAAGATCACATCAACCGGTGCCATGACTTTCTGCTTCATCCAAGCAATCGAGCGTGGACAGGCAGCCACATATGGGAGCATACTCAATTCTATGCGTAATACCATTCGAAGTACGGGTTCTGGTGGTGGTGGTGGTGGTAGTGCTGTTGCTTCTCTCCTTGGTGGTAGTGGAGGTGCTGTTACTTCGCTTGTCAGCATGCTTCTAACAGGTGGAAGTGTTGGTGGTGGTGGGCTAAGACAGGAGCCTCAATTAACTGCCTGTGAGCCGTTCGATGTGTACACGAAACCTTTCACCCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0010941 GO:0010942 GO:0016787 GO:0019538 GO:0043067 GO:0043068 GO:0043170 GO:0044238 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0065007 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN Peptidase_C14 zf-LSD1

Protein Analysis

382

Amino Acids

40.92

Weight (kDa)

6.42

Isoelectric Point (pI)

48.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-LSD1	PF06943	9 - 33	8.7e-10	LSD1 zinc finger
Peptidase_C14	PF00656	83 - 321	2.3e-34	Caspase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02170
fragaria_vesca	FvH4_7g08970 FvH4_7g08970 FvH4_7g08970 FvH4_7g26490
malus_domestica	MD01G1173500.v1.1 MD02G1221900.v1.1 MD05G1044000.v1.1 MD07G1094600.v1.1 MD07G1240400.v1.1 MD07G1240500.v1.1 MD10G1051100.v1.1 MD10G1051200.v1.1
prunus_persica	Prupe.2G118900_v2.0.a1 Prupe.2G269200_v2.0.a1 Prupe.8G059400_v2.0.a1
pyrus_communis	pycom01g18530 pycom01g18540 pycom02g18780 pycom05g03650 pycom07g07790 pycom07g21680 pycom10g03590
rosa_chinensis	RchiOBHm_Chr1g0344331 RchiOBHm_Chr1g0344461 RchiOBHm_Chr1g0344571 RchiOBHm_Chr1g0344661 RchiOBHm_Chr1g0344751 RchiOBHm_Chr1g0344811 RchiOBHm_Chr1g0344881 RchiOBHm_Chr1g0344901 RchiOBHm_Chr1g0344911 RchiOBHm_Chr1g0373091
rosa_laevigata	RLG00000028867 RLG00000028877 RLG00000028880 RLG00000028885 RLG00000028898
rosa_multiflora	Rmu_co8105290.1_g000001 Rmu_co8220756.1_g000001 Rmu_co8317965.1_g000001 Rmu_co8413861.1_g000001 Rmu_co8518347.1_g000001 Rmu_sc0000390.1_g000001 Rmu_sc0005177.1_g000002 Rmu_sc0007317.1_g000002 Rmu_sc0010876.1_g000003 Rmu_sc0013714.1_g000001 Rmu_sc0029558.1_g000002 Rmu_ssc0000167.1_g000004
rosa_roxburghii	Rroxscaffold_4G00284470 Rroxscaffold_4G00309530 Rroxscaffold_4G00309580 Rroxscaffold_4G00309590 Rroxscaffold_4G00309620 Rroxscaffold_4G00309630 Rroxscaffold_4G00309720 Rroxscaffold_4G00309880
rosa_rugosa	Rorug01G0173200 Rorug01G0173200 Rorug01G0174300 Rorug01G0174300 Rorug01G0174300 Rorug01G0174900 Rorug01G0376100
rosa_samantha	Rh1CG175000 Rh1CG176200 Rh1CG177200 Rh1CG177800 Rh1CG177900 Rh1CG178000 Rh1CG361900 Rh1DG188500 Rh1DG188700 Rh1DG189400 Rh1DG379400
rosa_wichuraiana	Rw1G015680 Rw1G015800 Rw1G015810 Rw1G015870 Rw1G033900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	866
AccBSI	CCGCTC	1 cut(s)	46
AccII	CGCG	4 cut(s)	110, 149, 179, 215
AciI	CCGC	8 cut(s)	44, 76, 110, 218, 230, 257, 267, 331
AclWI	GGATC	2 cut(s)	67, 750
AcoI	YGGCCR	2 cut(s)	172, 244
AcuI	CTGAAG	1 cut(s)	408
AcyI	GRCGYC	1 cut(s)	318
AfaI	GTAC	5 cut(s)	5, 456, 687, 961, 1127
AfiI	CCNNNNNNNGG	5 cut(s)	91, 109, 253, 758, 921
AflIII	ACRYGT	1 cut(s)	177
AgeI	ACCGGT	1 cut(s)	863
AgsI	TTSAA	1 cut(s)	355
AjnI	CCWGG	3 cut(s)	90, 469, 582
AluBI	AGCT	5 cut(s)	52, 298, 407, 649, 842
AluI	AGCT	5 cut(s)	52, 298, 407, 649, 842
Alw21I	GWGCWC	2 cut(s)	243, 300
Alw26I	GTCTC	1 cut(s)	186
Alw44I	GTGCAC	1 cut(s)	239
AlwI	GGATC	2 cut(s)	67, 750
Ama87I	CYCGRG	1 cut(s)	286
AoxI	GGCC	5 cut(s)	93, 172, 224, 244, 626
ApaLI	GTGCAC	1 cut(s)	239
ApeKI	GCWGC	2 cut(s)	78, 911
ArsI	GACNNNNNNTTYG	2 cut(s)	360, 392
AsiGI	ACCGGT	1 cut(s)	863
Asp700I	GAANNNNTTC	1 cut(s)	1136
AspLEI	GCGC	4 cut(s)	65, 83, 151, 217
AspS9I	GGNCC	3 cut(s)	112, 224, 627
AsuC2I	CCSGG	1 cut(s)	222
AsuHPI	GGTGA	6 cut(s)	31, 91, 271, 392, 485, 1132
AsuII	TTCGAA	2 cut(s)	576, 955
AvaI	CYCGRG	1 cut(s)	286
AvaII	GGWCC	1 cut(s)	112
BaeGI	GKGCMC	1 cut(s)	243
BanI	GGYRCC	1 cut(s)	866
BanII	GRGCYC	1 cut(s)	300
Bbv12I	GWGCWC	2 cut(s)	243, 300
BbvI	GCAGC	2 cut(s)	65, 923
BccI	CCATC	2 cut(s)	205, 536
BceAI	ACGGC	5 cut(s)	80, 187, 259, 527, 1099
BciT130I	CCWGG	3 cut(s)	92, 471, 584
BcnI	CCSGG	1 cut(s)	222
BcoDI	GTCTC	1 cut(s)	186
BfoI	RGCGCY	1 cut(s)	66
BglI	GCCNNNNNGGC	1 cut(s)	223
BisI	GCNGC	3 cut(s)	79, 218, 912
BlsI	GCNGC	3 cut(s)	80, 219, 913
Bme1390I	CCNGG	4 cut(s)	92, 222, 471, 584
Bme18I	GGWCC	1 cut(s)	112
BmeT110I	CYCGRG	1 cut(s)	286
BmgT120I	GGNCC	3 cut(s)	112, 224, 627
BmiI	GGNNCC	5 cut(s)	114, 225, 629, 868, 1092
BmrFI	CCNGG	4 cut(s)	92, 222, 471, 584
BmsI	GCATC	2 cut(s)	318, 452
BoxI	GACNNNNGTC	1 cut(s)	669
BpmI	CTGGAG	1 cut(s)	32
Bpu14I	TTCGAA	2 cut(s)	576, 955
BpuEI	CTTGAG	1 cut(s)	284
BpuMI	CCSGG	1 cut(s)	222
BsaBI	GATNNNNATC	1 cut(s)	816
BsaHI	GRCGYC	1 cut(s)	318
BsaJI	CCNNGG	4 cut(s)	221, 582, 583, 1006
BsaWI	WCCGGW	1 cut(s)	863
BsaXI	ACNNNNNCTCC	4 cut(s)	104, 134, 1011, 1041
Bsc4I	CCNNNNNNNGG	5 cut(s)	91, 109, 253, 758, 921
Bse118I	RCCGGY	1 cut(s)	863
Bse1I	ACTGG	1 cut(s)	693
Bse8I	GATNNNNATC	1 cut(s)	816
BseBI	CCWGG	3 cut(s)	92, 471, 584
BseDI	CCNNGG	4 cut(s)	221, 582, 583, 1006
BseGI	GGATG	2 cut(s)	467, 885
BseJI	GATNNNNATC	1 cut(s)	816
BseLI	CCNNNNNNNGG	5 cut(s)	91, 109, 253, 758, 921
BseMII	CTCAG	1 cut(s)	80
BseNI	ACTGG	1 cut(s)	693
BseRI	GAGGAG	4 cut(s)	130, 180, 183, 329
BseSI	GKGCMC	1 cut(s)	243
BseX3I	CGGCCG	1 cut(s)	244
BseXI	GCAGC	2 cut(s)	65, 923
BseYI	CCCAGC	1 cut(s)	403
BsgI	GTGCAG	1 cut(s)	110
Bsh1236I	CGCG	4 cut(s)	110, 149, 179, 215
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	5 cut(s)	95, 174, 226, 246, 628
BshNI	GGYRCC	1 cut(s)	866
BshTI	ACCGGT	1 cut(s)	863
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	2 cut(s)	243, 300
BsiHKCI	CYCGRG	1 cut(s)	286
BsiSI	CCGG	3 cut(s)	221, 247, 864
BslFI	GGGAC	1 cut(s)	549
BslI	CCNNNNNNNGG	5 cut(s)	91, 109, 253, 758, 921
BsmAI	GTCTC	1 cut(s)	186
BsmBI	CGTCTC	1 cut(s)	186
BsmFI	GGGAC	1 cut(s)	549
BsnI	GGCC	5 cut(s)	95, 174, 226, 246, 628
BsoBI	CYCGRG	1 cut(s)	286
Bsp119I	TTCGAA	2 cut(s)	576, 955
Bsp1286I	GDGCHC	2 cut(s)	243, 300
Bsp1407I	TGTACA	3 cut(s)	3, 454, 1125
Bsp143I	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
BspACI	CCGC	8 cut(s)	44, 76, 110, 218, 230, 257, 267, 331
BspANI	GGCC	5 cut(s)	95, 174, 226, 246, 628
BspCNI	CTCAG	1 cut(s)	79
BspFNI	CGCG	4 cut(s)	110, 149, 179, 215
BspHI	TCATGA	1 cut(s)	526
BspLI	GGNNCC	5 cut(s)	114, 225, 629, 868, 1092
BspPI	GGATC	2 cut(s)	67, 750
BspT104I	TTCGAA	2 cut(s)	576, 955
BspT107I	GGYRCC	1 cut(s)	866
BsrBI	CCGCTC	1 cut(s)	46
BsrFI	RCCGGY	1 cut(s)	863
BsrGI	TGTACA	3 cut(s)	3, 454, 1125
BsrI	ACTGG	1 cut(s)	693
BssAI	RCCGGY	1 cut(s)	863
BssECI	CCNNGG	4 cut(s)	221, 582, 583, 1006
BssMI	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
BssNI	GRCGYC	1 cut(s)	318
BssT1I	CCWWGG	1 cut(s)	1006
Bst2UI	CCWGG	3 cut(s)	92, 471, 584
Bst4CI	ACNGT	1 cut(s)	685
BstACI	GRCGYC	1 cut(s)	318
BstAUI	TGTACA	3 cut(s)	3, 454, 1125
BstBI	TTCGAA	2 cut(s)	576, 955
BstC8I	GCNNGC	3 cut(s)	239, 329, 1046
BstDEI	CTNAG	3 cut(s)	66, 408, 1082
BstENI	CCTNNNNNAGG	2 cut(s)	89, 756
BstF5I	GGATG	2 cut(s)	467, 885
BstFNI	CGCG	4 cut(s)	110, 149, 179, 215
BstH2I	RGCGCY	1 cut(s)	66
BstHHI	GCGC	4 cut(s)	65, 83, 151, 217
BstKTI	GATC	6 cut(s)	75, 264, 745, 758, 820, 855
BstMAI	GTCTC	1 cut(s)	186
BstMBI	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
BstMCI	CGRYCG	1 cut(s)	247
BstMWI	GCNNNNNNNGC	5 cut(s)	33, 87, 223, 238, 243
BstNI	CCWGG	3 cut(s)	92, 471, 584
BstNSI	RCATGY	3 cut(s)	331, 766, 1048
BstPAI	GACNNNNGTC	1 cut(s)	669
BstSCI	CCNGG	4 cut(s)	90, 220, 469, 582
BstSLI	GKGCMC	1 cut(s)	243
BstUI	CGCG	4 cut(s)	110, 149, 179, 215
BstV1I	GCAGC	2 cut(s)	65, 923
BstZI	CGGCCG	1 cut(s)	244
BsuRI	GGCC	5 cut(s)	95, 174, 226, 246, 628
BtgZI	GCGATG	2 cut(s)	183, 731
BtsCI	GGATG	2 cut(s)	467, 885
BtsIMutI	CAGTG	3 cut(s)	384, 681, 808
Cac8I	GCNNGC	3 cut(s)	239, 329, 1046
CciI	TCATGA	1 cut(s)	526
CfoI	GCGC	4 cut(s)	65, 83, 151, 217
Cfr10I	RCCGGY	1 cut(s)	863
Cfr13I	GGNCC	3 cut(s)	112, 224, 627
CseI	GACGC	2 cut(s)	168, 326
CsiI	ACCWGGT	1 cut(s)	469
Csp6I	GTAC	5 cut(s)	4, 455, 686, 960, 1126
CspAI	ACCGGT	1 cut(s)	863
CviQI	GTAC	5 cut(s)	4, 455, 686, 960, 1126
DdeI	CTNAG	3 cut(s)	66, 408, 1082
DpnI	GATC	6 cut(s)	74, 263, 744, 757, 819, 854
DpnII	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
EaeI	YGGCCR	2 cut(s)	172, 244
EagI	CGGCCG	1 cut(s)	244
EciI	GGCGGA	1 cut(s)	219
Ecl136II	GAGCTC	1 cut(s)	298
EclXI	CGGCCG	1 cut(s)	244
Eco130I	CCWWGG	1 cut(s)	1006
Eco24I	GRGCYC	1 cut(s)	300
Eco32I	GATATC	1 cut(s)	273
Eco47I	GGWCC	1 cut(s)	112
Eco52I	CGGCCG	1 cut(s)	244
Eco53kI	GAGCTC	1 cut(s)	298
Eco57I	CTGAAG	1 cut(s)	408
Eco88I	CYCGRG	1 cut(s)	286
EcoICRI	GAGCTC	1 cut(s)	298
EcoNI	CCTNNNNNAGG	2 cut(s)	89, 756
EcoO109I	RGGNCCY	2 cut(s)	224, 627
EcoRII	CCWGG	3 cut(s)	90, 469, 582
EcoRV	GATATC	1 cut(s)	273
EcoT14I	CCWWGG	1 cut(s)	1006
EcoT22I	ATGCAT	1 cut(s)	329
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	1006
Esp3I	CGTCTC	1 cut(s)	186
FaqI	GGGAC	1 cut(s)	549
FauI	CCCGC	2 cut(s)	51, 260
FauNDI	CATATG	1 cut(s)	919
Fnu4HI	GCNGC	3 cut(s)	79, 218, 912
FokI	GGATG	2 cut(s)	474, 872
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	3 cut(s)	79, 218, 912
GlaI	GCGC	4 cut(s)	64, 82, 150, 216
GluI	GCNGC	3 cut(s)	79, 218, 912
GsaI	CCCAGC	1 cut(s)	407
GsuI	CTGGAG	1 cut(s)	32
HaeII	RGCGCY	1 cut(s)	66
HaeIII	GGCC	5 cut(s)	95, 174, 226, 246, 628
HapII	CCGG	3 cut(s)	221, 247, 864
HgaI	GACGC	2 cut(s)	168, 326
HhaI	GCGC	4 cut(s)	65, 83, 151, 217
Hin1I	GRCGYC	1 cut(s)	318
Hin6I	GCGC	4 cut(s)	63, 81, 149, 215
HinP1I	GCGC	4 cut(s)	63, 81, 149, 215
HindIII	AAGCTT	1 cut(s)	647
HinfI	GANTC	4 cut(s)	368, 412, 476, 665
HpaII	CCGG	3 cut(s)	221, 247, 864
HphI	GGTGA	6 cut(s)	31, 91, 271, 392, 485, 1132
Hpy166II	GTNNAC	6 cut(s)	22, 241, 509, 905, 1126, 1128
Hpy188III	TCNNGA	2 cut(s)	362, 527
Hpy8I	GTNNAC	6 cut(s)	22, 241, 509, 905, 1126, 1128
Hpy99I	CGWCG	2 cut(s)	61, 368
HpyAV	CCTTC	2 cut(s)	247, 641
HpyCH4III	ACNGT	1 cut(s)	685
HpyCH4V	TGCA	8 cut(s)	36, 127, 241, 309, 327, 614, 656, 708
HpyF10VI	GCNNNNNNNGC	5 cut(s)	33, 87, 223, 238, 243
HpyF3I	CTNAG	3 cut(s)	66, 408, 1082
Hsp92I	GRCGYC	1 cut(s)	318
HspAI	GCGC	4 cut(s)	63, 81, 149, 215
Kzo9I	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
LmnI	GCTCC	6 cut(s)	32, 51, 125, 156, 924, 1090
Lsp1109I	GCAGC	2 cut(s)	65, 923
LweI	GCATC	2 cut(s)	318, 452
MabI	ACCWGGT	1 cut(s)	469
MaeIII	GTNAC	3 cut(s)	97, 473, 1027
MalI	GATC	6 cut(s)	74, 263, 744, 757, 819, 854
MbiI	CCGCTC	1 cut(s)	46
MboI	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
MboII	GAAGA	3 cut(s)	262, 401, 404
MfeI	CAATTG	1 cut(s)	618
MhlI	GDGCHC	2 cut(s)	243, 300
MluCI	AATT	4 cut(s)	618, 657, 934, 1097
MluI	ACGCGT	1 cut(s)	177
MlyI	GAGTC	2 cut(s)	470, 659
MmeI	TCCRAC	1 cut(s)	54
Mph1103I	ATGCAT	1 cut(s)	329
MroXI	GAANNNNTTC	1 cut(s)	1136
MseI	TTAA	1 cut(s)	1100
MslI	CAYNNNNRTG	3 cut(s)	377, 434, 531
MspA1I	CMGCKG	1 cut(s)	78
MspI	CCGG	3 cut(s)	221, 247, 864
MspR9I	CCNGG	4 cut(s)	92, 222, 471, 584
MunI	CAATTG	1 cut(s)	618
MvaI	CCWGG	3 cut(s)	92, 471, 584
MvnI	CGCG	4 cut(s)	110, 149, 179, 215
MwoI	GCNNNNNNNGC	5 cut(s)	33, 87, 223, 238, 243
NciI	CCSGG	1 cut(s)	222
NdeI	CATATG	1 cut(s)	919
NdeII	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
NlaIV	GGNNCC	5 cut(s)	114, 225, 629, 868, 1092
NmeAIII	GCCGAG	1 cut(s)	258
NmuCI	GTSAC	2 cut(s)	97, 473
NsiI	ATGCAT	1 cut(s)	329
NspI	RCATGY	3 cut(s)	331, 766, 1048
NspV	TTCGAA	2 cut(s)	576, 955
PaeI	GCATGC	2 cut(s)	331, 1048
PaeR7I	CTCGAG	1 cut(s)	286
PagI	TCATGA	1 cut(s)	526
PasI	CCCWGGG	1 cut(s)	583
PdmI	GAANNNNTTC	1 cut(s)	1136
PfeI	GAWTC	2 cut(s)	368, 412
PinAI	ACCGGT	1 cut(s)	863
PkrI	GCNGC	3 cut(s)	80, 219, 913
PleI	GAGTC	2 cut(s)	470, 659
PpsI	GAGTC	2 cut(s)	470, 659
PshAI	GACNNNNGTC	1 cut(s)	669
Psp124BI	GAGCTC	1 cut(s)	300
Psp6I	CCWGG	3 cut(s)	90, 469, 582
PspFI	CCCAGC	1 cut(s)	403
PspGI	CCWGG	3 cut(s)	90, 469, 582
PspN4I	GGNNCC	5 cut(s)	114, 225, 629, 868, 1092
PspPI	GGNCC	3 cut(s)	112, 224, 627
PspXI	VCTCGAGB	1 cut(s)	286
RsaI	GTAC	5 cut(s)	5, 456, 687, 961, 1127
RsaNI	GTAC	5 cut(s)	4, 455, 686, 960, 1126
RseI	CAYNNNNRTG	3 cut(s)	377, 434, 531
SacI	GAGCTC	1 cut(s)	300
SaqAI	TTAA	1 cut(s)	1100
SatI	GCNGC	3 cut(s)	79, 218, 912
Sau3AI	GATC	6 cut(s)	72, 261, 742, 755, 817, 852
Sau96I	GGNCC	3 cut(s)	112, 224, 627
SchI	GAGTC	2 cut(s)	470, 659
ScrFI	CCNGG	4 cut(s)	92, 222, 471, 584
SduI	GDGCHC	2 cut(s)	243, 300
SexAI	ACCWGGT	1 cut(s)	469
SfaNI	GCATC	2 cut(s)	318, 452
Sfr274I	CTCGAG	1 cut(s)	286
SfuI	TTCGAA	2 cut(s)	576, 955
SinI	GGWCC	1 cut(s)	112
SlaI	CTCGAG	1 cut(s)	286
SmiMI	CAYNNNNRTG	3 cut(s)	377, 434, 531
SmlI	CTYRAG	2 cut(s)	286, 299
SmoI	CTYRAG	2 cut(s)	286, 299
SphI	GCATGC	2 cut(s)	331, 1048
Sse9I	AATT	4 cut(s)	618, 657, 934, 1097
SsiI	CCGC	8 cut(s)	44, 76, 110, 218, 230, 257, 267, 331
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	4 cut(s)	90, 220, 469, 582
StyI	CCWWGG	1 cut(s)	1006
TaaI	ACNGT	1 cut(s)	685
TaqI	TCGA	8 cut(s)	71, 287, 576, 597, 754, 897, 955, 1119
TasI	AATT	4 cut(s)	618, 657, 934, 1097
TatI	WGTACW	4 cut(s)	3, 454, 685, 1125
TauI	GCSGC	1 cut(s)	220
TfiI	GAWTC	2 cut(s)	368, 412
Tru1I	TTAA	1 cut(s)	1100
Tru9I	TTAA	1 cut(s)	1100
TscAI	CASTG	3 cut(s)	391, 688, 808
TseFI	GTSAC	2 cut(s)	97, 473
TseI	GCWGC	2 cut(s)	78, 911
Tsp45I	GTSAC	2 cut(s)	97, 473
TspDTI	ATGAA	4 cut(s)	549, 567, 641, 874
TspGWI	ACGGA	1 cut(s)	45
TspRI	CASTG	3 cut(s)	391, 688, 808
VneI	GTGCAC	1 cut(s)	239
VpaK11BI	GGWCC	1 cut(s)	112
XagI	CCTNNNNNAGG	2 cut(s)	89, 756
XceI	RCATGY	3 cut(s)	331, 766, 1048
XhoI	CTCGAG	1 cut(s)	286
XmnI	GAANNNNTTC	1 cut(s)	1136
Zsp2I	ATGCAT	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.