Metacaspase-1-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 498 |
| AarI | CACCTGC | 1 cut(s) | 1277 |
| Acc36I | ACCTGC | 1 cut(s) | 1277 |
| AccB1I | GGYRCC | 3 cut(s) | 572, 1115, 1289 |
| AccI | GTMKAC | 2 cut(s) | 26, 659 |
| AccII | CGCG | 1 cut(s) | 617 |
| AclWI | GGATC | 2 cut(s) | 960, 1185 |
| AcoI | YGGCCR | 1 cut(s) | 676 |
| AcsI | RAATTY | 1 cut(s) | 268 |
| AcuI | CTGAAG | 2 cut(s) | 417, 840 |
| AcyI | GRCGYC | 2 cut(s) | 573, 750 |
| AfaI | GTAC | 3 cut(s) | 131, 888, 1384 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 685, 1193, 1344 |
| AgsI | TTSAA | 2 cut(s) | 787, 1580 |
| AjiI | CACGTC | 1 cut(s) | 137 |
| AjnI | CCWGG | 2 cut(s) | 642, 1017 |
| AluBI | AGCT | 4 cut(s) | 65, 118, 730, 1084 |
| AluI | AGCT | 4 cut(s) | 65, 118, 730, 1084 |
| Alw21I | GWGCWC | 2 cut(s) | 534, 732 |
| Alw26I | GTCTC | 1 cut(s) | 1262 |
| Alw44I | GTGCAC | 1 cut(s) | 530 |
| AlwI | GGATC | 2 cut(s) | 960, 1185 |
| Ama87I | CYCGRG | 1 cut(s) | 718 |
| AoxI | GGCC | 5 cut(s) | 6, 78, 647, 676, 1061 |
| ApaLI | GTGCAC | 1 cut(s) | 530 |
| ApeKI | GCWGC | 5 cut(s) | 65, 109, 115, 182, 1334 |
| ApoI | RAATTY | 1 cut(s) | 268 |
| AseI | ATTAAT | 1 cut(s) | 216 |
| AspLEI | GCGC | 3 cut(s) | 575, 593, 619 |
| AspS9I | GGNCC | 3 cut(s) | 515, 647, 1062 |
| AsuC2I | CCSGG | 6 cut(s) | 148, 457, 513, 570, 654, 903 |
| AsuHPI | GGTGA | 3 cut(s) | 370, 601, 977 |
| AsuII | TTCGAA | 2 cut(s) | 1011, 1562 |
| AvaI | CYCGRG | 1 cut(s) | 718 |
| AvaII | GGWCC | 1 cut(s) | 515 |
| BaeGI | GKGCMC | 1 cut(s) | 534 |
| BanI | GGYRCC | 3 cut(s) | 572, 1115, 1289 |
| BanII | GRGCYC | 2 cut(s) | 732, 1596 |
| BbsI | GAAGAC | 1 cut(s) | 1522 |
| Bbv12I | GWGCWC | 2 cut(s) | 534, 732 |
| BbvI | GCAGC | 5 cut(s) | 52, 96, 127, 169, 1346 |
| BccI | CCATC | 6 cut(s) | 520, 971, 1198, 1260, 1469, 1583 |
| BciT130I | CCWGG | 2 cut(s) | 644, 1019 |
| BciVI | GTATCC | 1 cut(s) | 454 |
| BclI | TGATCA | 1 cut(s) | 403 |
| BcnI | CCSGG | 6 cut(s) | 148, 457, 513, 570, 654, 903 |
| BcoDI | GTCTC | 1 cut(s) | 1262 |
| BfaI | CTAG | 1 cut(s) | 831 |
| BfoI | RGCGCY | 1 cut(s) | 576 |
| BfuAI | ACCTGC | 1 cut(s) | 1277 |
| BfuI | GTATCC | 1 cut(s) | 454 |
| BisI | GCNGC | 7 cut(s) | 66, 110, 113, 116, 183, 650, 1335 |
| BlpI | GCTNAGC | 1 cut(s) | 1480 |
| BlsI | GCNGC | 7 cut(s) | 67, 111, 114, 117, 184, 651, 1336 |
| Bme1390I | CCNGG | 8 cut(s) | 148, 457, 513, 570, 644, 654, 903, 1019 |
| Bme18I | GGWCC | 1 cut(s) | 515 |
| BmeT110I | CYCGRG | 1 cut(s) | 718 |
| BmgBI | CACGTC | 1 cut(s) | 137 |
| BmgT120I | GGNCC | 3 cut(s) | 515, 647, 1062 |
| BmiI | GGNNCC | 6 cut(s) | 516, 574, 648, 1117, 1291, 1595 |
| BmrFI | CCNGG | 8 cut(s) | 148, 457, 513, 570, 644, 654, 903, 1019 |
| BmrI | ACTGGG | 1 cut(s) | 258 |
| BmsI | GCATC | 1 cut(s) | 750 |
| BmuI | ACTGGG | 1 cut(s) | 258 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1274 |
| BpiI | GAAGAC | 1 cut(s) | 1522 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1480 |
| Bpu14I | TTCGAA | 2 cut(s) | 1011, 1562 |
| BpuEI | CTTGAG | 1 cut(s) | 716 |
| BpuMI | CCSGG | 6 cut(s) | 148, 457, 513, 570, 654, 903 |
| BsaBI | GATNNNNATC | 3 cut(s) | 87, 957, 1251 |
| BsaHI | GRCGYC | 2 cut(s) | 573, 750 |
| BsaJI | CCNNGG | 7 cut(s) | 381, 456, 643, 653, 902, 1017, 1018 |
| BsaWI | WCCGGW | 1 cut(s) | 1596 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 685, 1193, 1344 |
| Bse1I | ACTGG | 6 cut(s) | 23, 42, 127, 244, 253, 1128 |
| Bse8I | GATNNNNATC | 3 cut(s) | 87, 957, 1251 |
| BseBI | CCWGG | 2 cut(s) | 644, 1019 |
| BseDI | CCNNGG | 7 cut(s) | 381, 456, 643, 653, 902, 1017, 1018 |
| BseGI | GGATG | 3 cut(s) | 99, 899, 1308 |
| BseJI | GATNNNNATC | 3 cut(s) | 87, 957, 1251 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 685, 1193, 1344 |
| BseNI | ACTGG | 6 cut(s) | 23, 42, 127, 244, 253, 1128 |
| BseRI | GAGGAG | 1 cut(s) | 761 |
| BseSI | GKGCMC | 1 cut(s) | 534 |
| BseXI | GCAGC | 5 cut(s) | 52, 96, 127, 169, 1346 |
| BsgI | GTGCAG | 1 cut(s) | 168 |
| Bsh1236I | CGCG | 1 cut(s) | 617 |
| BshFI | GGCC | 5 cut(s) | 8, 80, 649, 678, 1063 |
| BshNI | GGYRCC | 3 cut(s) | 572, 1115, 1289 |
| BsiHKAI | GWGCWC | 2 cut(s) | 534, 732 |
| BsiHKCI | CYCGRG | 1 cut(s) | 718 |
| BsiSI | CCGG | 8 cut(s) | 147, 456, 512, 569, 653, 679, 902, 1597 |
| BslFI | GGGAC | 5 cut(s) | 182, 266, 528, 920, 984 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 685, 1193, 1344 |
| BsmAI | GTCTC | 1 cut(s) | 1262 |
| BsmFI | GGGAC | 5 cut(s) | 182, 266, 528, 920, 984 |
| BsmI | GAATGC | 1 cut(s) | 417 |
| BsnI | GGCC | 5 cut(s) | 8, 80, 649, 678, 1063 |
| BsoBI | CYCGRG | 1 cut(s) | 718 |
| Bsp119I | TTCGAA | 2 cut(s) | 1011, 1562 |
| Bsp1286I | GDGCHC | 3 cut(s) | 534, 732, 1596 |
| Bsp1407I | TGTACA | 1 cut(s) | 886 |
| Bsp143I | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1480 |
| BspANI | GGCC | 5 cut(s) | 8, 80, 649, 678, 1063 |
| BspFNI | CGCG | 1 cut(s) | 617 |
| BspHI | TCATGA | 1 cut(s) | 1030 |
| BspLI | GGNNCC | 6 cut(s) | 516, 574, 648, 1117, 1291, 1595 |
| BspMI | ACCTGC | 1 cut(s) | 1277 |
| BspPI | GGATC | 2 cut(s) | 960, 1185 |
| BspQI | GCTCTTC | 1 cut(s) | 1505 |
| BspT104I | TTCGAA | 2 cut(s) | 1011, 1562 |
| BspT107I | GGYRCC | 3 cut(s) | 572, 1115, 1289 |
| BsrGI | TGTACA | 1 cut(s) | 886 |
| BsrI | ACTGG | 6 cut(s) | 23, 42, 127, 244, 253, 1128 |
| BssECI | CCNNGG | 7 cut(s) | 381, 456, 643, 653, 902, 1017, 1018 |
| BssMI | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| BssNI | GRCGYC | 2 cut(s) | 573, 750 |
| BssT1I | CCWWGG | 1 cut(s) | 381 |
| Bst2UI | CCWGG | 2 cut(s) | 644, 1019 |
| Bst4CI | ACNGT | 5 cut(s) | 31, 179, 607, 1276, 1586 |
| Bst6I | CTCTTC | 2 cut(s) | 941, 1505 |
| BstACI | GRCGYC | 2 cut(s) | 573, 750 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1521 |
| BstAUI | TGTACA | 1 cut(s) | 886 |
| BstBI | TTCGAA | 2 cut(s) | 1011, 1562 |
| BstC8I | GCNNGC | 3 cut(s) | 300, 761, 1424 |
| BstDEI | CTNAG | 3 cut(s) | 1430, 1480, 1602 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1191 |
| BstF5I | GGATG | 3 cut(s) | 99, 899, 1308 |
| BstFNI | CGCG | 1 cut(s) | 617 |
| BstH2I | RGCGCY | 1 cut(s) | 576 |
| BstHHI | GCGC | 3 cut(s) | 575, 593, 619 |
| BstKTI | GATC | 5 cut(s) | 378, 406, 696, 955, 1180 |
| BstMAI | GTCTC | 1 cut(s) | 1262 |
| BstMBI | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 115, 157, 529, 543, 597, 670, 1521 |
| BstNI | CCWGG | 2 cut(s) | 644, 1019 |
| BstNSI | RCATGY | 4 cut(s) | 302, 763, 1426, 1573 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1274 |
| BstSCI | CCNGG | 8 cut(s) | 146, 455, 511, 568, 642, 652, 901, 1017 |
| BstSLI | GKGCMC | 1 cut(s) | 534 |
| BstUI | CGCG | 1 cut(s) | 617 |
| BstV1I | GCAGC | 5 cut(s) | 52, 96, 127, 169, 1346 |
| BstV2I | GAAGAC | 1 cut(s) | 1522 |
| BsuI | GTATCC | 1 cut(s) | 454 |
| BsuRI | GGCC | 5 cut(s) | 8, 80, 649, 678, 1063 |
| BtgZI | GCGATG | 1 cut(s) | 1166 |
| BtrI | CACGTC | 1 cut(s) | 137 |
| BtsCI | GGATG | 3 cut(s) | 99, 899, 1308 |
| BtsI | GCAGTG | 3 cut(s) | 489, 532, 696 |
| BtsIMutI | CAGTG | 5 cut(s) | 184, 489, 532, 696, 816 |
| BveI | ACCTGC | 1 cut(s) | 1277 |
| Cac8I | GCNNGC | 3 cut(s) | 300, 761, 1424 |
| CciI | TCATGA | 1 cut(s) | 1030 |
| CfoI | GCGC | 3 cut(s) | 575, 593, 619 |
| Cfr13I | GGNCC | 3 cut(s) | 515, 647, 1062 |
| CseI | GACGC | 1 cut(s) | 758 |
| Csp6I | GTAC | 3 cut(s) | 130, 887, 1383 |
| CviQI | GTAC | 3 cut(s) | 130, 887, 1383 |
| DdeI | CTNAG | 3 cut(s) | 1430, 1480, 1602 |
| DinI | GGCGCC | 1 cut(s) | 574 |
| DpnI | GATC | 5 cut(s) | 377, 405, 695, 954, 1179 |
| DpnII | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| EaeI | YGGCCR | 1 cut(s) | 676 |
| Eam1104I | CTCTTC | 2 cut(s) | 941, 1505 |
| EarI | CTCTTC | 2 cut(s) | 941, 1505 |
| Ecl136II | GAGCTC | 1 cut(s) | 730 |
| Eco130I | CCWWGG | 1 cut(s) | 381 |
| Eco24I | GRGCYC | 2 cut(s) | 732, 1596 |
| Eco32I | GATATC | 1 cut(s) | 705 |
| Eco47I | GGWCC | 1 cut(s) | 515 |
| Eco53kI | GAGCTC | 1 cut(s) | 730 |
| Eco57I | CTGAAG | 2 cut(s) | 417, 840 |
| Eco88I | CYCGRG | 1 cut(s) | 718 |
| EcoICRI | GAGCTC | 1 cut(s) | 730 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1191 |
| EcoO109I | RGGNCCY | 1 cut(s) | 515 |
| EcoRII | CCWGG | 2 cut(s) | 642, 1017 |
| EcoRV | GATATC | 1 cut(s) | 705 |
| EcoT14I | CCWWGG | 1 cut(s) | 381 |
| EcoT22I | ATGCAT | 1 cut(s) | 761 |
| EcoT38I | GRGCYC | 2 cut(s) | 732, 1596 |
| EgeI | GGCGCC | 1 cut(s) | 574 |
| EheI | GGCGCC | 1 cut(s) | 574 |
| ErhI | CCWWGG | 1 cut(s) | 381 |
| FaqI | GGGAC | 5 cut(s) | 182, 266, 528, 920, 984 |
| FauI | CCCGC | 3 cut(s) | 165, 573, 692 |
| FauNDI | CATATG | 1 cut(s) | 1342 |
| FbaI | TGATCA | 1 cut(s) | 403 |
| FblI | GTMKAC | 2 cut(s) | 26, 659 |
| Fnu4HI | GCNGC | 7 cut(s) | 66, 110, 113, 116, 183, 650, 1335 |
| FokI | GGATG | 3 cut(s) | 86, 906, 1295 |
| FriOI | GRGCYC | 2 cut(s) | 732, 1596 |
| Fsp4HI | GCNGC | 7 cut(s) | 66, 110, 113, 116, 183, 650, 1335 |
| FspBI | CTAG | 1 cut(s) | 831 |
| GlaI | GCGC | 3 cut(s) | 574, 592, 618 |
| GluI | GCNGC | 7 cut(s) | 66, 110, 113, 116, 183, 650, 1335 |
| HaeII | RGCGCY | 1 cut(s) | 576 |
| HaeIII | GGCC | 5 cut(s) | 8, 80, 649, 678, 1063 |
| HapII | CCGG | 8 cut(s) | 147, 456, 512, 569, 653, 679, 902, 1597 |
| HgaI | GACGC | 1 cut(s) | 758 |
| HhaI | GCGC | 3 cut(s) | 575, 593, 619 |
| Hin1I | GRCGYC | 2 cut(s) | 573, 750 |
| Hin6I | GCGC | 3 cut(s) | 573, 591, 617 |
| HinP1I | GCGC | 3 cut(s) | 573, 591, 617 |
| HincII | GTYRAC | 3 cut(s) | 27, 484, 899 |
| HindII | GTYRAC | 3 cut(s) | 27, 484, 899 |
| HindIII | AAGCTT | 1 cut(s) | 1082 |
| HinfI | GANTC | 7 cut(s) | 355, 800, 844, 908, 1027, 1100, 1536 |
| HpaII | CCGG | 8 cut(s) | 147, 456, 512, 569, 653, 679, 902, 1597 |
| HphI | GGTGA | 3 cut(s) | 370, 601, 977 |
| Hpy166II | GTNNAC | 7 cut(s) | 27, 484, 532, 660, 899, 941, 1471 |
| Hpy188I | TCNGA | 3 cut(s) | 408, 843, 1535 |
| Hpy188III | TCNNGA | 3 cut(s) | 733, 794, 1031 |
| Hpy8I | GTNNAC | 7 cut(s) | 27, 484, 532, 660, 899, 941, 1471 |
| Hpy99I | CGWCG | 2 cut(s) | 96, 141 |
| HpyAV | CCTTC | 5 cut(s) | 79, 372, 465, 679, 923 |
| HpyCH4III | ACNGT | 5 cut(s) | 31, 179, 607, 1276, 1586 |
| HpyCH4IV | ACGT | 1 cut(s) | 136 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 115, 157, 529, 543, 597, 670, 1521 |
| HpyF3I | CTNAG | 3 cut(s) | 1430, 1480, 1602 |
| HpySE526I | ACGT | 1 cut(s) | 136 |
| Hsp92I | GRCGYC | 2 cut(s) | 573, 750 |
| HspAI | GCGC | 3 cut(s) | 573, 591, 617 |
| KasI | GGCGCC | 1 cut(s) | 572 |
| Ksp22I | TGATCA | 1 cut(s) | 403 |
| Kzo9I | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| LguI | GCTCTTC | 1 cut(s) | 1505 |
| LmnI | GCTCC | 4 cut(s) | 542, 567, 1347, 1599 |
| Lsp1109I | GCAGC | 5 cut(s) | 52, 96, 127, 169, 1346 |
| LweI | GCATC | 1 cut(s) | 750 |
| MaeI | CTAG | 1 cut(s) | 831 |
| MaeII | ACGT | 1 cut(s) | 136 |
| MaeIII | GTNAC | 3 cut(s) | 235, 607, 1405 |
| MalI | GATC | 5 cut(s) | 377, 405, 695, 954, 1179 |
| MboI | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| MboII | GAAGA | 8 cut(s) | 410, 694, 809, 833, 836, 958, 1522, 1522 |
| MfeI | CAATTG | 1 cut(s) | 1053 |
| MhlI | GDGCHC | 3 cut(s) | 534, 732, 1596 |
| MluCI | AATT | 9 cut(s) | 205, 268, 324, 668, 1053, 1092, 1224, 1279, 1357 |
| Mly113I | GGCGCC | 1 cut(s) | 573 |
| MlyI | GAGTC | 2 cut(s) | 364, 902 |
| MmeI | TCCRAC | 2 cut(s) | 564, 872 |
| Mph1103I | ATGCAT | 1 cut(s) | 761 |
| MseI | TTAA | 2 cut(s) | 216, 1460 |
| MslI | CAYNNNNRTG | 4 cut(s) | 297, 809, 866, 960 |
| MspA1I | CMGCKG | 4 cut(s) | 65, 109, 118, 1239 |
| MspI | CCGG | 8 cut(s) | 147, 456, 512, 569, 653, 679, 902, 1597 |
| MspR9I | CCNGG | 8 cut(s) | 148, 457, 513, 570, 644, 654, 903, 1019 |
| MunI | CAATTG | 1 cut(s) | 1053 |
| Mva1269I | GAATGC | 1 cut(s) | 417 |
| MvaI | CCWGG | 2 cut(s) | 644, 1019 |
| MvnI | CGCG | 1 cut(s) | 617 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 115, 157, 529, 543, 597, 670, 1521 |
| NarI | GGCGCC | 1 cut(s) | 573 |
| NciI | CCSGG | 6 cut(s) | 148, 457, 513, 570, 654, 903 |
| NdeI | CATATG | 1 cut(s) | 1342 |
| NdeII | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| NlaIV | GGNNCC | 6 cut(s) | 516, 574, 648, 1117, 1291, 1595 |
| NmuCI | GTSAC | 1 cut(s) | 607 |
| NsiI | ATGCAT | 1 cut(s) | 761 |
| NspI | RCATGY | 4 cut(s) | 302, 763, 1426, 1573 |
| NspV | TTCGAA | 2 cut(s) | 1011, 1562 |
| PaeI | GCATGC | 3 cut(s) | 302, 763, 1426 |
| PaeR7I | CTCGAG | 1 cut(s) | 718 |
| PagI | TCATGA | 1 cut(s) | 1030 |
| PaqCI | CACCTGC | 1 cut(s) | 1277 |
| PasI | CCCWGGG | 1 cut(s) | 1018 |
| PciSI | GCTCTTC | 1 cut(s) | 1505 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 100, 302 |
| PctI | GAATGC | 1 cut(s) | 417 |
| PfeI | GAWTC | 5 cut(s) | 800, 844, 1027, 1100, 1536 |
| PkrI | GCNGC | 7 cut(s) | 67, 111, 114, 117, 184, 651, 1336 |
| PleI | GAGTC | 2 cut(s) | 363, 902 |
| PluTI | GGCGCC | 1 cut(s) | 576 |
| PpsI | GAGTC | 2 cut(s) | 363, 902 |
| PpuMI | RGGWCCY | 1 cut(s) | 515 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1274 |
| PshBI | ATTAAT | 1 cut(s) | 216 |
| PsiI | TTATAA | 1 cut(s) | 498 |
| Psp124BI | GAGCTC | 1 cut(s) | 732 |
| Psp5II | RGGWCCY | 1 cut(s) | 515 |
| Psp6I | CCWGG | 2 cut(s) | 642, 1017 |
| PspGI | CCWGG | 2 cut(s) | 642, 1017 |
| PspN4I | GGNNCC | 6 cut(s) | 516, 574, 648, 1117, 1291, 1595 |
| PspPI | GGNCC | 3 cut(s) | 515, 647, 1062 |
| PspPPI | RGGWCCY | 1 cut(s) | 515 |
| PspXI | VCTCGAGB | 1 cut(s) | 718 |
| PvuII | CAGCTG | 2 cut(s) | 65, 118 |
| RsaI | GTAC | 3 cut(s) | 131, 888, 1384 |
| RsaNI | GTAC | 3 cut(s) | 130, 887, 1383 |
| RseI | CAYNNNNRTG | 4 cut(s) | 297, 809, 866, 960 |
| SacI | GAGCTC | 1 cut(s) | 732 |
| SalI | GTCGAC | 1 cut(s) | 25 |
| SapI | GCTCTTC | 1 cut(s) | 1505 |
| SaqAI | TTAA | 2 cut(s) | 216, 1460 |
| SatI | GCNGC | 7 cut(s) | 66, 110, 113, 116, 183, 650, 1335 |
| Sau3AI | GATC | 5 cut(s) | 375, 403, 693, 952, 1177 |
| Sau96I | GGNCC | 3 cut(s) | 515, 647, 1062 |
| SchI | GAGTC | 2 cut(s) | 364, 902 |
| ScrFI | CCNGG | 8 cut(s) | 148, 457, 513, 570, 644, 654, 903, 1019 |
| SduI | GDGCHC | 3 cut(s) | 534, 732, 1596 |
| SfaNI | GCATC | 1 cut(s) | 750 |
| SfoI | GGCGCC | 1 cut(s) | 574 |
| Sfr274I | CTCGAG | 1 cut(s) | 718 |
| SfuI | TTCGAA | 2 cut(s) | 1011, 1562 |
| SinI | GGWCC | 1 cut(s) | 515 |
| SlaI | CTCGAG | 1 cut(s) | 718 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 297, 809, 866, 960 |
| SmlI | CTYRAG | 2 cut(s) | 718, 731 |
| SmoI | CTYRAG | 2 cut(s) | 718, 731 |
| SphI | GCATGC | 3 cut(s) | 302, 763, 1426 |
| Sse9I | AATT | 9 cut(s) | 205, 268, 324, 668, 1053, 1092, 1224, 1279, 1357 |
| SspDI | GGCGCC | 1 cut(s) | 572 |
| SspMI | CTAG | 1 cut(s) | 831 |
| SstI | GAGCTC | 1 cut(s) | 732 |
| StyD4I | CCNGG | 8 cut(s) | 146, 455, 511, 568, 642, 652, 901, 1017 |
| StyI | CCWWGG | 1 cut(s) | 381 |
| TaaI | ACNGT | 5 cut(s) | 31, 179, 607, 1276, 1586 |
| TaiI | ACGT | 1 cut(s) | 139 |
| TaqI | TCGA | 7 cut(s) | 26, 353, 719, 1011, 1320, 1378, 1562 |
| TasI | AATT | 9 cut(s) | 205, 268, 324, 668, 1053, 1092, 1224, 1279, 1357 |
| TatI | WGTACW | 1 cut(s) | 886 |
| TauI | GCSGC | 2 cut(s) | 115, 652 |
| TfiI | GAWTC | 5 cut(s) | 800, 844, 1027, 1100, 1536 |
| Tru1I | TTAA | 2 cut(s) | 216, 1460 |
| Tru9I | TTAA | 2 cut(s) | 216, 1460 |
| TscAI | CASTG | 5 cut(s) | 184, 496, 539, 696, 823 |
| TseFI | GTSAC | 1 cut(s) | 607 |
| TseI | GCWGC | 5 cut(s) | 65, 109, 115, 182, 1334 |
| Tsp45I | GTSAC | 1 cut(s) | 607 |
| TspDTI | ATGAA | 4 cut(s) | 1002, 1019, 1076, 1297 |
| TspGWI | ACGGA | 3 cut(s) | 92, 575, 958 |
| TspRI | CASTG | 5 cut(s) | 184, 496, 539, 696, 823 |
| VneI | GTGCAC | 1 cut(s) | 530 |
| VpaK11BI | GGWCC | 1 cut(s) | 515 |
| VspI | ATTAAT | 1 cut(s) | 216 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1191 |
| XapI | RAATTY | 1 cut(s) | 268 |
| XceI | RCATGY | 4 cut(s) | 302, 763, 1426, 1573 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1197 |
| XhoI | CTCGAG | 1 cut(s) | 718 |
| XmiI | GTMKAC | 2 cut(s) | 26, 659 |
| XspI | CTAG | 1 cut(s) | 831 |
| Zsp2I | ATGCAT | 1 cut(s) | 761 |