Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000588

Physical Location & Seq

Genomic Coordinates Reverse (-)

35188717 .. 35192875

Gene Structure 4159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G015800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGAGCAATTATGGAGGCCAACGACTACTAGTGGTCGACTGTTGCTATTGCCAGACCCAAATCCAGCTGCCTTCTGTAAGTCCGATATACATCGTCGGCACATCCGTCCGCTGCGGCCGCTGCTATGCCAGTACCCGCGTCGCCTCTCCGGGCTTCCCCCGCTCCCCTTATAGTGCTGTACCCTACTATGTCCCTATAAACCCACCACCACACGCCGGCTTCTGCCACAGCTCACCAGGACCTCCGCCGAACGTGCACATGCCGAAGAAGGCGGTGATCTGCGGGATATCGTATAGGTACTCGAGGCATGAGCTCAAAGGTTGCATCAATGACGCCAAAAACATGCGGTATCTCCTCATGAGCAAGTTCAAGTTTCCAGAAGATTCCATTTGCATGCTCACTGAAGAAGAAACTCACCCATATAAGATTCCATATAAAAACAACATTAGAATGGCATTAGATTGGCTTGTACAAGGATGCCAACCAGGTGACTCCCTTGTGTTTCACTACTCTGGTCATGGTTCACGGCAGTTGGATTATGATGGTGATGAAGTTGATGGATATGATGAAACCCTTTGTCCCCTTGACTTCGAAACCCAGGGTATGATTGATGATGATGAGATAAATGCAGCAATTGTTAGGCCCATTCCACATGGGGTCAAGCTTCATGCAATTATAGATTCTTGTCATAGTGGCACCATACTGGATTTGCCATTCCTTTGCAGAATGAACATGGGTGGAATATATGTATGGGAGGATCATCGCCCTCCATCAGGCGTATGGAAAGGAACAAGTGGTGGAGAAGTTATATCTATCAGTGGTTGTGATGACTATCAAACGTCTGCGGAAACATCAGCTCTATCCAAGATCACATCAACAGGTGCCATGACTTTCTGCTTCATCCAAGCAATCGAGCATGGACAGGCAGCCACATATGGGAGCTTACTCAATTCTATGCGTAGTACCATTCGAAGTATGGGTTCTGCTAGTGGTGGTAGTGCTGGTGCTGTTACATCTCTTGCCGGCATGCTTCTAATAGGCGGAAGTGTTGGTGGTGGTAGGCTAAGACAGTTCAAACAGCTCGAAGACGCAATTTTTTTGCAATACAATAATTTTAAGATTTCAATATCTTTGAGTATCTTTTCCTGGAAGATGTATTTTAGCTCTATTTCATTTTACCTCCCTAACCTTTACAAGTTAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0010941 GO:0010942 GO:0016787 GO:0019538 GO:0043067 GO:0043068 GO:0043170 GO:0044238 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0065007 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN Peptidase_C14 zf-LSD1

Protein Analysis

401

Amino Acids

44.09

Weight (kDa)

6.62

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C14	PF00656	89 - 324	4.3e-32	Caspase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02170
fragaria_vesca	FvH4_7g08970 FvH4_7g08970 FvH4_7g08970 FvH4_7g26490
malus_domestica	MD01G1173500.v1.1 MD02G1221900.v1.1 MD05G1044000.v1.1 MD07G1094600.v1.1 MD07G1240400.v1.1 MD07G1240500.v1.1 MD10G1051100.v1.1 MD10G1051200.v1.1
prunus_persica	Prupe.2G118900_v2.0.a1 Prupe.2G269200_v2.0.a1 Prupe.8G059400_v2.0.a1
pyrus_communis	pycom01g18530 pycom01g18540 pycom02g18780 pycom05g03650 pycom07g07790 pycom07g21680 pycom10g03590
rosa_chinensis	RchiOBHm_Chr1g0344331 RchiOBHm_Chr1g0344461 RchiOBHm_Chr1g0344571 RchiOBHm_Chr1g0344661 RchiOBHm_Chr1g0344751 RchiOBHm_Chr1g0344811 RchiOBHm_Chr1g0344881 RchiOBHm_Chr1g0344901 RchiOBHm_Chr1g0344911 RchiOBHm_Chr1g0373091
rosa_laevigata	RLG00000028867 RLG00000028877 RLG00000028880 RLG00000028885 RLG00000028898
rosa_multiflora	Rmu_co8105290.1_g000001 Rmu_co8220756.1_g000001 Rmu_co8317965.1_g000001 Rmu_co8413861.1_g000001 Rmu_co8518347.1_g000001 Rmu_sc0000390.1_g000001 Rmu_sc0005177.1_g000002 Rmu_sc0007317.1_g000002 Rmu_sc0010876.1_g000003 Rmu_sc0013714.1_g000001 Rmu_sc0029558.1_g000002 Rmu_ssc0000167.1_g000004
rosa_roxburghii	Rroxscaffold_4G00284470 Rroxscaffold_4G00309530 Rroxscaffold_4G00309580 Rroxscaffold_4G00309590 Rroxscaffold_4G00309620 Rroxscaffold_4G00309630 Rroxscaffold_4G00309720 Rroxscaffold_4G00309880
rosa_rugosa	Rorug01G0173200 Rorug01G0173200 Rorug01G0174300 Rorug01G0174300 Rorug01G0174300 Rorug01G0174900 Rorug01G0376100
rosa_samantha	Rh1CG175000 Rh1CG176200 Rh1CG177200 Rh1CG177800 Rh1CG177900 Rh1CG178000 Rh1CG361900 Rh1DG188500 Rh1DG188700 Rh1DG189400 Rh1DG379400
rosa_wichuraiana	Rw1G015680 Rw1G015800 Rw1G015810 Rw1G015870 Rw1G033900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	695, 881
AccBSI	CCGCTC	1 cut(s)	162
AccI	GTMKAC	1 cut(s)	36
AccII	CGCG	1 cut(s)	138
AclWI	GGATC	1 cut(s)	765
AcoI	YGGCCR	1 cut(s)	115
AcuI	CTGAAG	1 cut(s)	423
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	5 cut(s)	133, 180, 299, 471, 964
AfiI	CCNNNNNNNGG	3 cut(s)	215, 773, 936
AgsI	TTSAA	3 cut(s)	370, 1075, 1125
AhlI	ACTAGT	1 cut(s)	28
AjnI	CCWGG	4 cut(s)	235, 484, 597, 1145
AluBI	AGCT	8 cut(s)	67, 231, 313, 664, 857, 942, 1081, 1164
AluI	AGCT	8 cut(s)	67, 231, 313, 664, 857, 942, 1081, 1164
Alw21I	GWGCWC	2 cut(s)	258, 315
Alw44I	GTGCAC	1 cut(s)	254
AlwI	GGATC	1 cut(s)	765
Ama87I	CYCGRG	1 cut(s)	301
AoxI	GGCC	3 cut(s)	16, 115, 641
ApaLI	GTGCAC	1 cut(s)	254
ApeKI	GCWGC	5 cut(s)	67, 111, 120, 629, 926
AspS9I	GGNCC	2 cut(s)	239, 642
AsuC2I	CCSGG	1 cut(s)	150
AsuHPI	GGTGA	5 cut(s)	225, 286, 407, 500, 557
AsuII	TTCGAA	2 cut(s)	591, 970
AvaI	CYCGRG	1 cut(s)	301
AvaII	GGWCC	1 cut(s)	239
BaeGI	GKGCMC	1 cut(s)	258
BanI	GGYRCC	2 cut(s)	695, 881
BanII	GRGCYC	1 cut(s)	315
BbsI	GAAGAC	1 cut(s)	1092
Bbv12I	GWGCWC	2 cut(s)	258, 315
BbvI	GCAGC	5 cut(s)	54, 98, 107, 641, 938
BccI	CCATC	3 cut(s)	536, 551, 778
BceAI	ACGGC	1 cut(s)	542
BciT130I	CCWGG	4 cut(s)	237, 486, 599, 1147
BcnI	CCSGG	1 cut(s)	150
BcuI	ACTAGT	1 cut(s)	28
BfaI	CTAG	2 cut(s)	29, 987
BisI	GCNGC	7 cut(s)	68, 112, 115, 118, 121, 630, 927
BlsI	GCNGC	7 cut(s)	69, 113, 116, 119, 122, 631, 928
Bme1390I	CCNGG	5 cut(s)	150, 237, 486, 599, 1147
Bme18I	GGWCC	1 cut(s)	239
BmeT110I	CYCGRG	1 cut(s)	301
BmgT120I	GGNCC	2 cut(s)	239, 642
BmiI	GGNNCC	2 cut(s)	697, 883
BmrFI	CCNGG	5 cut(s)	150, 237, 486, 599, 1147
BmsI	GCATC	2 cut(s)	333, 467
BpiI	GAAGAC	1 cut(s)	1092
Bpu14I	TTCGAA	2 cut(s)	591, 970
BpuMI	CCSGG	1 cut(s)	150
BsaBI	GATNNNNATC	2 cut(s)	89, 831
BsaHI	GRCGYC	1 cut(s)	333
BsaJI	CCNNGG	2 cut(s)	597, 598
Bsc4I	CCNNNNNNNGG	3 cut(s)	215, 773, 936
Bse118I	RCCGGY	2 cut(s)	215, 1022
Bse1I	ACTGG	2 cut(s)	129, 708
Bse8I	GATNNNNATC	2 cut(s)	89, 831
BseBI	CCWGG	4 cut(s)	237, 486, 599, 1147
BseDI	CCNNGG	2 cut(s)	597, 598
BseGI	GGATG	3 cut(s)	101, 482, 900
BseJI	GATNNNNATC	2 cut(s)	89, 831
BseLI	CCNNNNNNNGG	3 cut(s)	215, 773, 936
BseNI	ACTGG	2 cut(s)	129, 708
BseRI	GAGGAG	1 cut(s)	344
BseSI	GKGCMC	1 cut(s)	258
BseX3I	CGGCCG	1 cut(s)	115
BseXI	GCAGC	5 cut(s)	54, 98, 107, 641, 938
Bsh1236I	CGCG	1 cut(s)	138
Bsh1285I	CGRYCG	1 cut(s)	118
BshFI	GGCC	3 cut(s)	18, 117, 643
BshNI	GGYRCC	2 cut(s)	695, 881
BsiEI	CGRYCG	1 cut(s)	118
BsiHKAI	GWGCWC	2 cut(s)	258, 315
BsiHKCI	CYCGRG	1 cut(s)	301
BsiSI	CCGG	3 cut(s)	149, 216, 1023
BslFI	GGGAC	2 cut(s)	176, 564
BslI	CCNNNNNNNGG	3 cut(s)	215, 773, 936
BsmFI	GGGAC	2 cut(s)	176, 564
BsnI	GGCC	3 cut(s)	18, 117, 643
BsoBI	CYCGRG	1 cut(s)	301
Bsp119I	TTCGAA	2 cut(s)	591, 970
Bsp1286I	GDGCHC	2 cut(s)	258, 315
Bsp1407I	TGTACA	1 cut(s)	469
Bsp143I	GATC	3 cut(s)	276, 757, 867
BspANI	GGCC	3 cut(s)	18, 117, 643
BspFNI	CGCG	1 cut(s)	138
BspHI	TCATGA	1 cut(s)	357
BspLI	GGNNCC	2 cut(s)	697, 883
BspPI	GGATC	1 cut(s)	765
BspT104I	TTCGAA	2 cut(s)	591, 970
BspT107I	GGYRCC	2 cut(s)	695, 881
BsrBI	CCGCTC	1 cut(s)	162
BsrFI	RCCGGY	2 cut(s)	215, 1022
BsrGI	TGTACA	1 cut(s)	469
BsrI	ACTGG	2 cut(s)	129, 708
BssAI	RCCGGY	2 cut(s)	215, 1022
BssECI	CCNNGG	2 cut(s)	597, 598
BssMI	GATC	3 cut(s)	276, 757, 867
BssNI	GRCGYC	1 cut(s)	333
Bst2UI	CCWGG	4 cut(s)	237, 486, 599, 1147
Bst4CI	ACNGT	2 cut(s)	41, 1071
BstACI	GRCGYC	1 cut(s)	333
BstAUI	TGTACA	1 cut(s)	469
BstBI	TTCGAA	2 cut(s)	591, 970
BstC8I	GCNNGC	4 cut(s)	217, 395, 1024, 1028
BstDEI	CTNAG	1 cut(s)	1064
BstENI	CCTNNNNNAGG	1 cut(s)	771
BstF5I	GGATG	3 cut(s)	101, 482, 900
BstFNI	CGCG	1 cut(s)	138
BstKTI	GATC	3 cut(s)	279, 760, 870
BstMBI	GATC	3 cut(s)	276, 757, 867
BstMCI	CGRYCG	1 cut(s)	118
BstMWI	GCNNNNNNNGC	4 cut(s)	117, 120, 159, 253
BstNI	CCWGG	4 cut(s)	237, 486, 599, 1147
BstNSI	RCATGY	4 cut(s)	262, 346, 397, 1030
BstSCI	CCNGG	5 cut(s)	148, 235, 484, 597, 1145
BstSLI	GKGCMC	1 cut(s)	258
BstUI	CGCG	1 cut(s)	138
BstV1I	GCAGC	5 cut(s)	54, 98, 107, 641, 938
BstV2I	GAAGAC	1 cut(s)	1092
BstZI	CGGCCG	1 cut(s)	115
BsuRI	GGCC	3 cut(s)	18, 117, 643
BtgZI	GCGATG	1 cut(s)	746
BtsCI	GGATG	3 cut(s)	101, 482, 900
BtsIMutI	CAGTG	2 cut(s)	399, 823
Cac8I	GCNNGC	4 cut(s)	217, 395, 1024, 1028
CciI	TCATGA	1 cut(s)	357
CciNI	GCGGCCGC	1 cut(s)	115
Cfr10I	RCCGGY	2 cut(s)	215, 1022
Cfr13I	GGNCC	2 cut(s)	239, 642
CseI	GACGC	3 cut(s)	127, 341, 1097
CsiI	ACCWGGT	1 cut(s)	484
Csp6I	GTAC	5 cut(s)	132, 179, 298, 470, 963
CviQI	GTAC	5 cut(s)	132, 179, 298, 470, 963
DdeI	CTNAG	1 cut(s)	1064
DpnI	GATC	3 cut(s)	278, 759, 869
DpnII	GATC	3 cut(s)	276, 757, 867
EaeI	YGGCCR	1 cut(s)	115
EagI	CGGCCG	1 cut(s)	115
EciI	GGCGGA	2 cut(s)	234, 1056
Ecl136II	GAGCTC	1 cut(s)	313
EclXI	CGGCCG	1 cut(s)	115
Eco24I	GRGCYC	1 cut(s)	315
Eco32I	GATATC	1 cut(s)	288
Eco47I	GGWCC	1 cut(s)	239
Eco52I	CGGCCG	1 cut(s)	115
Eco53kI	GAGCTC	1 cut(s)	313
Eco57I	CTGAAG	1 cut(s)	423
Eco88I	CYCGRG	1 cut(s)	301
EcoICRI	GAGCTC	1 cut(s)	313
EcoNI	CCTNNNNNAGG	1 cut(s)	771
EcoO109I	RGGNCCY	1 cut(s)	239
EcoRII	CCWGG	4 cut(s)	235, 484, 597, 1145
EcoRV	GATATC	1 cut(s)	288
EcoT38I	GRGCYC	1 cut(s)	315
FaqI	GGGAC	2 cut(s)	176, 564
FauI	CCCGC	3 cut(s)	143, 167, 275
FauNDI	CATATG	1 cut(s)	934
FblI	GTMKAC	1 cut(s)	36
Fnu4HI	GCNGC	7 cut(s)	68, 112, 115, 118, 121, 630, 927
FokI	GGATG	3 cut(s)	88, 489, 887
FriOI	GRGCYC	1 cut(s)	315
Fsp4HI	GCNGC	7 cut(s)	68, 112, 115, 118, 121, 630, 927
FspBI	CTAG	2 cut(s)	29, 987
GluI	GCNGC	7 cut(s)	68, 112, 115, 118, 121, 630, 927
HaeIII	GGCC	3 cut(s)	18, 117, 643
HapII	CCGG	3 cut(s)	149, 216, 1023
HgaI	GACGC	3 cut(s)	127, 341, 1097
Hin1I	GRCGYC	1 cut(s)	333
HincII	GTYRAC	1 cut(s)	37
HindII	GTYRAC	1 cut(s)	37
HindIII	AAGCTT	1 cut(s)	662
HinfI	GANTC	4 cut(s)	383, 427, 491, 680
HpaII	CCGG	3 cut(s)	149, 216, 1023
HphI	GGTGA	5 cut(s)	225, 286, 407, 500, 557
Hpy166II	GTNNAC	3 cut(s)	37, 256, 524
Hpy188I	TCNGA	1 cut(s)	84
Hpy188III	TCNNGA	2 cut(s)	358, 377
Hpy8I	GTNNAC	3 cut(s)	37, 256, 524
Hpy99I	CGWCG	2 cut(s)	98, 143
HpyAV	CCTTC	2 cut(s)	81, 262
HpyCH4III	ACNGT	2 cut(s)	41, 1071
HpyCH4IV	ACGT	2 cut(s)	252, 839
HpyCH4V	TGCA	7 cut(s)	256, 324, 393, 629, 671, 723, 1102
HpyF10VI	GCNNNNNNNGC	4 cut(s)	117, 120, 159, 253
HpyF3I	CTNAG	1 cut(s)	1064
HpySE526I	ACGT	2 cut(s)	252, 839
Hsp92I	GRCGYC	1 cut(s)	333
KroI	GCCGGC	2 cut(s)	215, 1022
KroNI	GCCGGC	2 cut(s)	217, 1024
Kzo9I	GATC	3 cut(s)	276, 757, 867
LmnI	GCTCC	2 cut(s)	167, 939
Lsp1109I	GCAGC	5 cut(s)	54, 98, 107, 641, 938
LweI	GCATC	2 cut(s)	333, 467
MabI	ACCWGGT	1 cut(s)	484
MaeI	CTAG	2 cut(s)	29, 987
MaeII	ACGT	2 cut(s)	252, 839
MaeIII	GTNAC	2 cut(s)	488, 1009
MalI	GATC	3 cut(s)	278, 759, 869
MbiI	CCGCTC	1 cut(s)	162
MboI	GATC	3 cut(s)	276, 757, 867
MboII	GAAGA	6 cut(s)	277, 392, 416, 419, 1097, 1162
MfeI	CAATTG	1 cut(s)	633
MhlI	GDGCHC	2 cut(s)	258, 315
MluCI	AATT	7 cut(s)	7, 633, 672, 949, 1092, 1111, 1201
MlyI	GAGTC	1 cut(s)	485
MmeI	TCCRAC	1 cut(s)	513
MnlI	CCTC	8 cut(s)	8, 154, 252, 297, 365, 748, 777, 1190
MroNI	GCCGGC	2 cut(s)	215, 1022
MseI	TTAA	2 cut(s)	1116, 1199
MslI	CAYNNNNRTG	2 cut(s)	392, 449
MspA1I	CMGCKG	3 cut(s)	67, 111, 120
MspI	CCGG	3 cut(s)	149, 216, 1023
MspR9I	CCNGG	5 cut(s)	150, 237, 486, 599, 1147
MunI	CAATTG	1 cut(s)	633
MvaI	CCWGG	4 cut(s)	237, 486, 599, 1147
MvnI	CGCG	1 cut(s)	138
MwoI	GCNNNNNNNGC	4 cut(s)	117, 120, 159, 253
NaeI	GCCGGC	2 cut(s)	217, 1024
NciI	CCSGG	1 cut(s)	150
NdeI	CATATG	1 cut(s)	934
NdeII	GATC	3 cut(s)	276, 757, 867
NgoMIV	GCCGGC	2 cut(s)	215, 1022
NlaIV	GGNNCC	2 cut(s)	697, 883
NmuCI	GTSAC	1 cut(s)	488
NotI	GCGGCCGC	1 cut(s)	115
NspI	RCATGY	4 cut(s)	262, 346, 397, 1030
NspV	TTCGAA	2 cut(s)	591, 970
PaeI	GCATGC	2 cut(s)	397, 1030
PaeR7I	CTCGAG	1 cut(s)	301
PagI	TCATGA	1 cut(s)	357
PasI	CCCWGGG	1 cut(s)	598
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PdiI	GCCGGC	2 cut(s)	217, 1024
PfeI	GAWTC	3 cut(s)	383, 427, 680
PfoI	TCCNGGA	1 cut(s)	1145
PkrI	GCNGC	7 cut(s)	69, 113, 116, 119, 122, 631, 928
PleI	GAGTC	1 cut(s)	485
PpsI	GAGTC	1 cut(s)	485
PpuMI	RGGWCCY	1 cut(s)	239
Psp124BI	GAGCTC	1 cut(s)	315
Psp5II	RGGWCCY	1 cut(s)	239
Psp6I	CCWGG	4 cut(s)	235, 484, 597, 1145
PspGI	CCWGG	4 cut(s)	235, 484, 597, 1145
PspN4I	GGNNCC	2 cut(s)	697, 883
PspPI	GGNCC	2 cut(s)	239, 642
PspPPI	RGGWCCY	1 cut(s)	239
PspXI	VCTCGAGB	1 cut(s)	301
PvuII	CAGCTG	1 cut(s)	67
RsaI	GTAC	5 cut(s)	133, 180, 299, 471, 964
RsaNI	GTAC	5 cut(s)	132, 179, 298, 470, 963
RseI	CAYNNNNRTG	2 cut(s)	392, 449
SacI	GAGCTC	1 cut(s)	315
SalI	GTCGAC	1 cut(s)	35
SaqAI	TTAA	2 cut(s)	1116, 1199
SatI	GCNGC	7 cut(s)	68, 112, 115, 118, 121, 630, 927
Sau3AI	GATC	3 cut(s)	276, 757, 867
Sau96I	GGNCC	2 cut(s)	239, 642
SchI	GAGTC	1 cut(s)	485
ScrFI	CCNGG	5 cut(s)	150, 237, 486, 599, 1147
SduI	GDGCHC	2 cut(s)	258, 315
SexAI	ACCWGGT	1 cut(s)	484
SfaNI	GCATC	2 cut(s)	333, 467
Sfr274I	CTCGAG	1 cut(s)	301
SfuI	TTCGAA	2 cut(s)	591, 970
SinI	GGWCC	1 cut(s)	239
SlaI	CTCGAG	1 cut(s)	301
SmiMI	CAYNNNNRTG	2 cut(s)	392, 449
SmlI	CTYRAG	1 cut(s)	301
SmoI	CTYRAG	1 cut(s)	301
SpeI	ACTAGT	1 cut(s)	28
SphI	GCATGC	2 cut(s)	397, 1030
Sse9I	AATT	7 cut(s)	7, 633, 672, 949, 1092, 1111, 1201
SspMI	CTAG	2 cut(s)	29, 987
SstI	GAGCTC	1 cut(s)	315
StyD4I	CCNGG	5 cut(s)	148, 235, 484, 597, 1145
TaaI	ACNGT	2 cut(s)	41, 1071
TaiI	ACGT	2 cut(s)	255, 842
TaqI	TCGA	6 cut(s)	36, 302, 591, 912, 970, 1083
TasI	AATT	7 cut(s)	7, 633, 672, 949, 1092, 1111, 1201
TatI	WGTACW	1 cut(s)	469
TauI	GCSGC	2 cut(s)	117, 120
TfiI	GAWTC	3 cut(s)	383, 427, 680
Tru1I	TTAA	2 cut(s)	1116, 1199
Tru9I	TTAA	2 cut(s)	1116, 1199
TscAI	CASTG	2 cut(s)	406, 823
TseFI	GTSAC	1 cut(s)	488
TseI	GCWGC	5 cut(s)	67, 111, 120, 629, 926
Tsp45I	GTSAC	1 cut(s)	488
TspDTI	ATGAA	6 cut(s)	564, 582, 656, 743, 889, 1161
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	2 cut(s)	406, 823
VneI	GTGCAC	1 cut(s)	254
VpaK11BI	GGWCC	1 cut(s)	239
XagI	CCTNNNNNAGG	1 cut(s)	771
XceI	RCATGY	4 cut(s)	262, 346, 397, 1030
XcmI	CCANNNNNNNNNTGG	2 cut(s)	777, 973
XhoI	CTCGAG	1 cut(s)	301
XmiI	GTMKAC	1 cut(s)	36
XspI	CTAG	2 cut(s)	29, 987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.