Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000588

Physical Location & Seq

Genomic Coordinates Forward (+)

31308808 .. 31311806

Gene Structure 2999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00309530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGAGCATTTATGGAGGCCAACGACAACTGGTGGTCGACTGTTGCAATTGCCAGACCCAAATCCAGCTGCCTTCTGTGAATCCGATATACCTCGTCGGCACATCCGTCCGCTGCGGCAGCTGCTATGCCAGTACCCTCGTCGCCTCTCCTGGCTCCACCCGCTCCCTCCATGGTGCTGTAGCCTACTATGTCGACGTCTTATTTTCAGGTTGCACTATTGTTTCTGGTAATAAAGTTAGTGGAAACACTGGGGACCATAATGGAAGTTTTTCTGTTGGCAACACTCTCCCTCCCTCGCCCTACAACCACGCGCCGCCGGGACCTCCGCCGAACGTGCACGGCCGGAAGAAGGCGGTGATCTGCGGGATATCGTATAAATACTCGAGGCATGAGCTCAAGGGTTGCATCAATGACGCCAAATGCATGCGGCATCTCCTCATCAACAAATTCAAGTTTCCAGATGATTCCATTCTCATGCTCACTGAAGAAGAAACTCAGCCAGCTAAGATTCCAAATAGATACAACATTAGAATGGCATTACATTGGCTTGTACAAGGATGCCAACCAGGTGACTCCCTTGTGTTTCACTACTCTGGTCATGGTTCACGGCAGAGGGATTATCATGGTGATGAAGTTGATGGATATAATGAAACCCTTTGTCCCCTTGACTTTGAAACCCAGGATATGATTGTCGATGATGAGATAAATGCAACAATTGTTAGGCCCATTCCACATGGGGTCAAGCTTCATGCAATTATAGACTCTGGTCATAGTGGCACTGTACTGGATTTGCCATTCCTTTGCAGAATGAACAGGGGTGGAAAATATGTATGGGAGGATCATCGCCCTAGATCAGGCATATGGAAAGGAACAAGTGGTGGAGAAGTTATATCTATCAGTGGTTGTGATGACGATCAAACCTCTGCTGATGCATCAGCTCTATCCAAGATCACATCAACCAGTGCTATGACTTTCTGCTTCATCCAAGCAATCGAGCGCGGACAGGCAGCCACATATGGAAGCATACTCAATTCTATGCGTAATATCATTCGAAGTACGGGCTCTGGTGGTGGTGGGCTAAGACAGGAGCCTCAATTAACTTCCTGTGAGCCGTTCGATGTGTACACGAAACCTTTCGCCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0010941 GO:0010942 GO:0016787 GO:0019538 GO:0043067 GO:0043068 GO:0043170 GO:0044238 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0065007 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN Peptidase_C14 zf-LSD1

Protein Analysis

381

Amino Acids

41.43

Weight (kDa)

6.69

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C14	PF00656	115 - 370	3.6e-34	Caspase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02170
fragaria_vesca	FvH4_7g08970 FvH4_7g08970 FvH4_7g08970 FvH4_7g26490
malus_domestica	MD01G1173500.v1.1 MD02G1221900.v1.1 MD05G1044000.v1.1 MD07G1094600.v1.1 MD07G1240400.v1.1 MD07G1240500.v1.1 MD10G1051100.v1.1 MD10G1051200.v1.1
prunus_persica	Prupe.2G118900_v2.0.a1 Prupe.2G269200_v2.0.a1 Prupe.8G059400_v2.0.a1
pyrus_communis	pycom01g18530 pycom01g18540 pycom02g18780 pycom05g03650 pycom07g07790 pycom07g21680 pycom10g03590
rosa_chinensis	RchiOBHm_Chr1g0344331 RchiOBHm_Chr1g0344461 RchiOBHm_Chr1g0344571 RchiOBHm_Chr1g0344661 RchiOBHm_Chr1g0344751 RchiOBHm_Chr1g0344811 RchiOBHm_Chr1g0344881 RchiOBHm_Chr1g0344901 RchiOBHm_Chr1g0344911 RchiOBHm_Chr1g0373091
rosa_laevigata	RLG00000028867 RLG00000028877 RLG00000028880 RLG00000028885 RLG00000028898
rosa_multiflora	Rmu_co8105290.1_g000001 Rmu_co8220756.1_g000001 Rmu_co8317965.1_g000001 Rmu_co8413861.1_g000001 Rmu_co8518347.1_g000001 Rmu_sc0000390.1_g000001 Rmu_sc0005177.1_g000002 Rmu_sc0007317.1_g000002 Rmu_sc0010876.1_g000003 Rmu_sc0013714.1_g000001 Rmu_sc0029558.1_g000002 Rmu_ssc0000167.1_g000004
rosa_roxburghii	Rroxscaffold_4G00284470 Rroxscaffold_4G00309530 Rroxscaffold_4G00309580 Rroxscaffold_4G00309590 Rroxscaffold_4G00309620 Rroxscaffold_4G00309630 Rroxscaffold_4G00309720 Rroxscaffold_4G00309880
rosa_rugosa	Rorug01G0173200 Rorug01G0173200 Rorug01G0174300 Rorug01G0174300 Rorug01G0174300 Rorug01G0174900 Rorug01G0376100
rosa_samantha	Rh1CG175000 Rh1CG176200 Rh1CG177200 Rh1CG177800 Rh1CG177900 Rh1CG178000 Rh1CG361900 Rh1DG188500 Rh1DG188700 Rh1DG189400 Rh1DG379400
rosa_wichuraiana	Rw1G015680 Rw1G015800 Rw1G015810 Rw1G015870 Rw1G033900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	198
AccBSI	CCGCTC	1 cut(s)	162
AccI	GTMKAC	2 cut(s)	36, 192
AccII	CGCG	2 cut(s)	311, 999
AciI	CCGC	9 cut(s)	109, 114, 160, 314, 326, 353, 363, 427, 999
AclWI	GGATC	1 cut(s)	846
AcoI	YGGCCR	1 cut(s)	340
AcsI	RAATTY	1 cut(s)	446
AcuI	CTGAAG	1 cut(s)	504
AcyI	GRCGYC	2 cut(s)	195, 414
AfaI	GTAC	5 cut(s)	133, 552, 783, 1057, 1124
AfiI	CCNNNNNNNGG	2 cut(s)	349, 854
AgsI	TTSAA	2 cut(s)	451, 674
AjnI	CCWGG	3 cut(s)	148, 565, 678
AluBI	AGCT	6 cut(s)	67, 120, 394, 503, 745, 938
AluI	AGCT	6 cut(s)	67, 120, 394, 503, 745, 938
Alw21I	GWGCWC	2 cut(s)	339, 396
Alw44I	GTGCAC	1 cut(s)	335
AlwI	GGATC	1 cut(s)	846
Ama87I	CYCGRG	1 cut(s)	382
AoxI	GGCC	3 cut(s)	16, 340, 722
ApaLI	GTGCAC	1 cut(s)	335
ApeKI	GCWGC	5 cut(s)	67, 111, 117, 120, 1007
ApoI	RAATTY	1 cut(s)	446
Asp700I	GAANNNNTTC	2 cut(s)	268, 1133
AspLEI	GCGC	2 cut(s)	313, 999
AspS9I	GGNCC	3 cut(s)	253, 320, 723
AsuC2I	CCSGG	1 cut(s)	318
AsuHPI	GGTGA	3 cut(s)	367, 581, 638
AsuII	TTCGAA	1 cut(s)	1051
AvaI	CYCGRG	1 cut(s)	382
AvaII	GGWCC	2 cut(s)	253, 320
BaeGI	GKGCMC	1 cut(s)	339
BanII	GRGCYC	2 cut(s)	396, 1064
Bbv12I	GWGCWC	2 cut(s)	339, 396
BbvI	GCAGC	5 cut(s)	54, 98, 107, 129, 1019
BccI	CCATC	1 cut(s)	632
BceAI	ACGGC	3 cut(s)	355, 623, 1096
BciT130I	CCWGG	3 cut(s)	150, 567, 680
BcnI	CCSGG	1 cut(s)	318
BfaI	CTAG	1 cut(s)	849
BfmI	CTRYAG	1 cut(s)	177
BisI	GCNGC	8 cut(s)	68, 112, 115, 118, 121, 314, 428, 1008
BlsI	GCNGC	8 cut(s)	69, 113, 116, 119, 122, 315, 429, 1009
Bme1390I	CCNGG	4 cut(s)	150, 318, 567, 680
Bme18I	GGWCC	2 cut(s)	253, 320
BmeT110I	CYCGRG	1 cut(s)	382
BmgT120I	GGNCC	3 cut(s)	253, 320, 723
BmiI	GGNNCC	4 cut(s)	154, 254, 321, 1089
BmrFI	CCNGG	4 cut(s)	150, 318, 567, 680
BmrI	ACTGGG	1 cut(s)	258
BmsI	GCATC	5 cut(s)	414, 439, 548, 919, 941
BmuI	ACTGGG	1 cut(s)	258
BoxI	GACNNNNGTC	1 cut(s)	765
Bpu14I	TTCGAA	1 cut(s)	1051
BpuEI	CTTGAG	1 cut(s)	380
BpuMI	CCSGG	1 cut(s)	318
BsaBI	GATNNNNATC	1 cut(s)	912
BsaHI	GRCGYC	2 cut(s)	195, 414
BsaJI	CCNNGG	2 cut(s)	169, 678
BsaXI	ACNNNNNCTCC	2 cut(s)	274, 304
Bsc4I	CCNNNNNNNGG	2 cut(s)	349, 854
Bse1I	ACTGG	5 cut(s)	33, 129, 253, 789, 960
Bse8I	GATNNNNATC	1 cut(s)	912
BseBI	CCWGG	3 cut(s)	150, 567, 680
BseDI	CCNNGG	2 cut(s)	169, 678
BseGI	GGATG	3 cut(s)	101, 563, 981
BseJI	GATNNNNATC	1 cut(s)	912
BseLI	CCNNNNNNNGG	2 cut(s)	349, 854
BseMII	CTCAG	1 cut(s)	509
BseNI	ACTGG	5 cut(s)	33, 129, 253, 789, 960
BseRI	GAGGAG	1 cut(s)	425
BseSI	GKGCMC	1 cut(s)	339
BseX3I	CGGCCG	1 cut(s)	340
BseXI	GCAGC	5 cut(s)	54, 98, 107, 129, 1019
Bsh1236I	CGCG	2 cut(s)	311, 999
Bsh1285I	CGRYCG	1 cut(s)	343
BshFI	GGCC	3 cut(s)	18, 342, 724
BsiEI	CGRYCG	1 cut(s)	343
BsiHKAI	GWGCWC	2 cut(s)	339, 396
BsiHKCI	CYCGRG	1 cut(s)	382
BsiSI	CCGG	2 cut(s)	317, 343
BslFI	GGGAC	3 cut(s)	266, 333, 645
BslI	CCNNNNNNNGG	2 cut(s)	349, 854
BsmFI	GGGAC	3 cut(s)	266, 333, 645
BsnI	GGCC	3 cut(s)	18, 342, 724
BsoBI	CYCGRG	1 cut(s)	382
Bsp119I	TTCGAA	1 cut(s)	1051
Bsp1286I	GDGCHC	3 cut(s)	339, 396, 1064
Bsp1407I	TGTACA	2 cut(s)	550, 1122
Bsp143I	GATC	5 cut(s)	357, 838, 851, 913, 948
Bsp19I	CCATGG	1 cut(s)	169
BspACI	CCGC	9 cut(s)	109, 114, 160, 314, 326, 353, 363, 427, 999
BspANI	GGCC	3 cut(s)	18, 342, 724
BspCNI	CTCAG	1 cut(s)	508
BspFNI	CGCG	2 cut(s)	311, 999
BspLI	GGNNCC	4 cut(s)	154, 254, 321, 1089
BspPI	GGATC	1 cut(s)	846
BspT104I	TTCGAA	1 cut(s)	1051
BsrBI	CCGCTC	1 cut(s)	162
BsrGI	TGTACA	2 cut(s)	550, 1122
BsrI	ACTGG	5 cut(s)	33, 129, 253, 789, 960
BssECI	CCNNGG	2 cut(s)	169, 678
BssMI	GATC	5 cut(s)	357, 838, 851, 913, 948
BssNI	GRCGYC	2 cut(s)	195, 414
BssT1I	CCWWGG	1 cut(s)	169
Bst2UI	CCWGG	3 cut(s)	150, 567, 680
Bst4CI	ACNGT	2 cut(s)	41, 781
BstACI	GRCGYC	2 cut(s)	195, 414
BstAUI	TGTACA	2 cut(s)	550, 1122
BstBI	TTCGAA	1 cut(s)	1051
BstC8I	GCNNGC	2 cut(s)	425, 501
BstDEI	CTNAG	3 cut(s)	495, 504, 1079
BstDSI	CCRYGG	1 cut(s)	169
BstENI	CCTNNNNNAGG	1 cut(s)	852
BstF5I	GGATG	3 cut(s)	101, 563, 981
BstFNI	CGCG	2 cut(s)	311, 999
BstHHI	GCGC	2 cut(s)	313, 999
BstKTI	GATC	5 cut(s)	360, 841, 854, 916, 951
BstMBI	GATC	5 cut(s)	357, 838, 851, 913, 948
BstMCI	CGRYCG	1 cut(s)	343
BstMWI	GCNNNNNNNGC	4 cut(s)	117, 120, 159, 334
BstNI	CCWGG	3 cut(s)	150, 567, 680
BstNSI	RCATGY	1 cut(s)	427
BstPAI	GACNNNNGTC	1 cut(s)	765
BstSCI	CCNGG	4 cut(s)	148, 316, 565, 678
BstSFI	CTRYAG	1 cut(s)	177
BstSLI	GKGCMC	1 cut(s)	339
BstUI	CGCG	2 cut(s)	311, 999
BstV1I	GCAGC	5 cut(s)	54, 98, 107, 129, 1019
BstZI	CGGCCG	1 cut(s)	340
BsuRI	GGCC	3 cut(s)	18, 342, 724
BtgI	CCRYGG	1 cut(s)	169
BtgZI	GCGATG	1 cut(s)	827
BtsCI	GGATG	3 cut(s)	101, 563, 981
BtsIMutI	CAGTG	5 cut(s)	246, 480, 777, 904, 967
Cac8I	GCNNGC	2 cut(s)	425, 501
CfoI	GCGC	2 cut(s)	313, 999
Cfr13I	GGNCC	3 cut(s)	253, 320, 723
CseI	GACGC	1 cut(s)	422
CsiI	ACCWGGT	1 cut(s)	565
Csp6I	GTAC	5 cut(s)	132, 551, 782, 1056, 1123
CviAII	CATG	8 cut(s)	170, 389, 424, 475, 599, 623, 734, 749
CviQI	GTAC	5 cut(s)	132, 551, 782, 1056, 1123
DdeI	CTNAG	3 cut(s)	495, 504, 1079
DpnI	GATC	5 cut(s)	359, 840, 853, 915, 950
DpnII	GATC	5 cut(s)	357, 838, 851, 913, 948
EaeI	YGGCCR	1 cut(s)	340
EagI	CGGCCG	1 cut(s)	340
EciI	GGCGGA	1 cut(s)	315
Ecl136II	GAGCTC	1 cut(s)	394
EclXI	CGGCCG	1 cut(s)	340
Eco130I	CCWWGG	1 cut(s)	169
Eco24I	GRGCYC	2 cut(s)	396, 1064
Eco32I	GATATC	1 cut(s)	369
Eco47I	GGWCC	2 cut(s)	253, 320
Eco52I	CGGCCG	1 cut(s)	340
Eco53kI	GAGCTC	1 cut(s)	394
Eco57I	CTGAAG	1 cut(s)	504
Eco88I	CYCGRG	1 cut(s)	382
EcoICRI	GAGCTC	1 cut(s)	394
EcoNI	CCTNNNNNAGG	1 cut(s)	852
EcoO109I	RGGNCCY	1 cut(s)	320
EcoRII	CCWGG	3 cut(s)	148, 565, 678
EcoRV	GATATC	1 cut(s)	369
EcoT14I	CCWWGG	1 cut(s)	169
EcoT22I	ATGCAT	2 cut(s)	425, 934
EcoT38I	GRGCYC	2 cut(s)	396, 1064
ErhI	CCWWGG	1 cut(s)	169
FaeI	CATG	8 cut(s)	173, 392, 427, 478, 602, 626, 737, 752
FaqI	GGGAC	3 cut(s)	266, 333, 645
FatI	CATG	8 cut(s)	169, 388, 423, 474, 598, 622, 733, 748
FauI	CCCGC	2 cut(s)	167, 356
FauNDI	CATATG	2 cut(s)	860, 1015
FblI	GTMKAC	2 cut(s)	36, 192
Fnu4HI	GCNGC	8 cut(s)	68, 112, 115, 118, 121, 314, 428, 1008
FokI	GGATG	3 cut(s)	88, 570, 968
FriOI	GRGCYC	2 cut(s)	396, 1064
Fsp4HI	GCNGC	8 cut(s)	68, 112, 115, 118, 121, 314, 428, 1008
FspBI	CTAG	1 cut(s)	849
GlaI	GCGC	2 cut(s)	312, 998
GluI	GCNGC	8 cut(s)	68, 112, 115, 118, 121, 314, 428, 1008
HaeIII	GGCC	3 cut(s)	18, 342, 724
HapII	CCGG	2 cut(s)	317, 343
HgaI	GACGC	1 cut(s)	422
HhaI	GCGC	2 cut(s)	313, 999
Hin1I	GRCGYC	2 cut(s)	195, 414
Hin1II	CATG	8 cut(s)	173, 392, 427, 478, 602, 626, 737, 752
Hin6I	GCGC	2 cut(s)	311, 997
HinP1I	GCGC	2 cut(s)	311, 997
HincII	GTYRAC	2 cut(s)	37, 193
HindII	GTYRAC	2 cut(s)	37, 193
HindIII	AAGCTT	1 cut(s)	743
HinfI	GANTC	5 cut(s)	79, 464, 508, 572, 761
HpaII	CCGG	2 cut(s)	317, 343
HphI	GGTGA	3 cut(s)	367, 581, 638
Hpy166II	GTNNAC	6 cut(s)	37, 193, 337, 605, 1123, 1125
Hpy188I	TCNGA	1 cut(s)	84
Hpy188III	TCNNGA	1 cut(s)	458
Hpy8I	GTNNAC	6 cut(s)	37, 193, 337, 605, 1123, 1125
Hpy99I	CGWCG	3 cut(s)	98, 143, 197
HpyAV	CCTTC	2 cut(s)	81, 343
HpyCH4III	ACNGT	2 cut(s)	41, 781
HpyCH4IV	ACGT	2 cut(s)	195, 333
HpyCH4V	TGCA	9 cut(s)	45, 213, 337, 405, 423, 710, 752, 804, 932
HpyF10VI	GCNNNNNNNGC	4 cut(s)	117, 120, 159, 334
HpyF3I	CTNAG	3 cut(s)	495, 504, 1079
HpySE526I	ACGT	2 cut(s)	195, 333
Hsp92I	GRCGYC	2 cut(s)	195, 414
Hsp92II	CATG	8 cut(s)	173, 392, 427, 478, 602, 626, 737, 752
HspAI	GCGC	2 cut(s)	311, 997
Kzo9I	GATC	5 cut(s)	357, 838, 851, 913, 948
LmnI	GCTCC	3 cut(s)	158, 167, 1087
Lsp1109I	GCAGC	5 cut(s)	54, 98, 107, 129, 1019
LweI	GCATC	5 cut(s)	414, 439, 548, 919, 941
MabI	ACCWGGT	1 cut(s)	565
MaeI	CTAG	1 cut(s)	849
MaeII	ACGT	2 cut(s)	195, 333
MaeIII	GTNAC	1 cut(s)	569
MalI	GATC	5 cut(s)	359, 840, 853, 915, 950
MbiI	CCGCTC	1 cut(s)	162
MboI	GATC	5 cut(s)	357, 838, 851, 913, 948
MboII	GAAGA	3 cut(s)	358, 497, 500
MfeI	CAATTG	2 cut(s)	46, 714
MhlI	GDGCHC	3 cut(s)	339, 396, 1064
MluCI	AATT	6 cut(s)	46, 446, 714, 753, 1030, 1094
MlyI	GAGTC	2 cut(s)	566, 755
Mph1103I	ATGCAT	2 cut(s)	425, 934
MroXI	GAANNNNTTC	2 cut(s)	268, 1133
MseI	TTAA	1 cut(s)	1097
MslI	CAYNNNNRTG	3 cut(s)	473, 530, 627
MspA1I	CMGCKG	3 cut(s)	67, 111, 120
MspI	CCGG	2 cut(s)	317, 343
MspR9I	CCNGG	4 cut(s)	150, 318, 567, 680
MunI	CAATTG	2 cut(s)	46, 714
MvaI	CCWGG	3 cut(s)	150, 567, 680
MvnI	CGCG	2 cut(s)	311, 999
MwoI	GCNNNNNNNGC	4 cut(s)	117, 120, 159, 334
NciI	CCSGG	1 cut(s)	318
NcoI	CCATGG	1 cut(s)	169
NdeI	CATATG	2 cut(s)	860, 1015
NdeII	GATC	5 cut(s)	357, 838, 851, 913, 948
NlaIII	CATG	8 cut(s)	173, 392, 427, 478, 602, 626, 737, 752
NlaIV	GGNNCC	4 cut(s)	154, 254, 321, 1089
NmuCI	GTSAC	1 cut(s)	569
NsiI	ATGCAT	2 cut(s)	425, 934
NspI	RCATGY	1 cut(s)	427
NspV	TTCGAA	1 cut(s)	1051
PaeI	GCATGC	1 cut(s)	427
PaeR7I	CTCGAG	1 cut(s)	382
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PdmI	GAANNNNTTC	2 cut(s)	268, 1133
PfeI	GAWTC	3 cut(s)	79, 464, 508
PkrI	GCNGC	8 cut(s)	69, 113, 116, 119, 122, 315, 429, 1009
PleI	GAGTC	2 cut(s)	566, 755
PpsI	GAGTC	2 cut(s)	566, 755
PpuMI	RGGWCCY	1 cut(s)	320
PshAI	GACNNNNGTC	1 cut(s)	765
Psp124BI	GAGCTC	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	320
Psp6I	CCWGG	3 cut(s)	148, 565, 678
PspGI	CCWGG	3 cut(s)	148, 565, 678
PspN4I	GGNNCC	4 cut(s)	154, 254, 321, 1089
PspPI	GGNCC	3 cut(s)	253, 320, 723
PspPPI	RGGWCCY	1 cut(s)	320
PspXI	VCTCGAGB	1 cut(s)	382
PvuII	CAGCTG	2 cut(s)	67, 120
RsaI	GTAC	5 cut(s)	133, 552, 783, 1057, 1124
RsaNI	GTAC	5 cut(s)	132, 551, 782, 1056, 1123
RseI	CAYNNNNRTG	3 cut(s)	473, 530, 627
SacI	GAGCTC	1 cut(s)	396
SalI	GTCGAC	2 cut(s)	35, 191
SaqAI	TTAA	1 cut(s)	1097
SatI	GCNGC	8 cut(s)	68, 112, 115, 118, 121, 314, 428, 1008
Sau3AI	GATC	5 cut(s)	357, 838, 851, 913, 948
Sau96I	GGNCC	3 cut(s)	253, 320, 723
SchI	GAGTC	2 cut(s)	566, 755
ScrFI	CCNGG	4 cut(s)	150, 318, 567, 680
SduI	GDGCHC	3 cut(s)	339, 396, 1064
SexAI	ACCWGGT	1 cut(s)	565
SfaNI	GCATC	5 cut(s)	414, 439, 548, 919, 941
SfcI	CTRYAG	1 cut(s)	177
Sfr274I	CTCGAG	1 cut(s)	382
SfuI	TTCGAA	1 cut(s)	1051
SinI	GGWCC	2 cut(s)	253, 320
SlaI	CTCGAG	1 cut(s)	382
SmiMI	CAYNNNNRTG	3 cut(s)	473, 530, 627
SmlI	CTYRAG	2 cut(s)	382, 395
SmoI	CTYRAG	2 cut(s)	382, 395
SphI	GCATGC	1 cut(s)	427
Sse9I	AATT	6 cut(s)	46, 446, 714, 753, 1030, 1094
SsiI	CCGC	9 cut(s)	109, 114, 160, 314, 326, 353, 363, 427, 999
SspMI	CTAG	1 cut(s)	849
SstI	GAGCTC	1 cut(s)	396
StyD4I	CCNGG	4 cut(s)	148, 316, 565, 678
StyI	CCWWGG	1 cut(s)	169
TaaI	ACNGT	2 cut(s)	41, 781
TaiI	ACGT	2 cut(s)	198, 336
TaqI	TCGA	7 cut(s)	36, 192, 383, 693, 993, 1051, 1116
TasI	AATT	6 cut(s)	46, 446, 714, 753, 1030, 1094
TatI	WGTACW	3 cut(s)	550, 781, 1122
TauI	GCSGC	3 cut(s)	117, 316, 430
TfiI	GAWTC	3 cut(s)	79, 464, 508
Tru1I	TTAA	1 cut(s)	1097
Tru9I	TTAA	1 cut(s)	1097
TscAI	CASTG	5 cut(s)	253, 487, 784, 904, 967
TseFI	GTSAC	1 cut(s)	569
TseI	GCWGC	5 cut(s)	67, 111, 117, 120, 1007
Tsp45I	GTSAC	1 cut(s)	569
TspDTI	ATGAA	5 cut(s)	645, 663, 737, 824, 970
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	5 cut(s)	253, 487, 784, 904, 967
VneI	GTGCAC	1 cut(s)	335
VpaK11BI	GGWCC	2 cut(s)	253, 320
XagI	CCTNNNNNAGG	1 cut(s)	852
XapI	RAATTY	1 cut(s)	446
XceI	RCATGY	1 cut(s)	427
XhoI	CTCGAG	1 cut(s)	382
XmiI	GTMKAC	2 cut(s)	36, 192
XmnI	GAANNNNTTC	2 cut(s)	268, 1133
XspI	CTAG	1 cut(s)	849
ZraI	GACGTC	1 cut(s)	196
Zsp2I	ATGCAT	2 cut(s)	425, 934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.