FvH4_7g31300

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000755
Physical Location & Seq
Forward (+)
22653153 .. 22657081
3929 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31300.t1

Sequence Viewer

Length: 1887 bp
ATGGCGGTTCAATCATCAAGGAGAATACTGAGTGGTGATATAGAAGAAAATGGTGATGAACGAATTCAAAAGGCTAATGGCATTTATTCAAGTGCAAGTTTAGCATCAGTGGACTGGGCTGCCAATAACGTCTCTAAAGCTATGGTGCCTCTTTTCGAAGGGCTAAAGAGTTTTAGTAAAACCATGAAAATTTATTATGGAGTTCTGTCAATAGGCTTGAGTTCCAATAAGAAAATTCATGACAGCCAGCGCCAGAAATCAGTTCAGCAACTGTGGAATAAGACGCTTCTTGTTCTGTGTGTCATTGCGCTCTCACTGGATCCTTTGTTTTGCTATATTCTTGTGGTTAATGATGAGAAAAAGTGTCTTCGAATGGACAGAAAATTAAGAGCTACAGCTACAGTTCTGCGAGGAGTTGTGGATTTCTTCTATCTGTTTTACATCATTTATCAATTTCGTGCTAGTTATGTCACTCTTTTTTCTAAATCATCGAGAGGAGGTAAACTGGCTCCGGATACTCAGGCAAGAGCAAGGAGGTATTTGTTGTTGTACTTCATATTCGACATCCTTGTAATTCTTCCACTTCCACAGGGGATAGTTTATGGTATCATTCCAAGATTGTACTTCCATGCAACACAGTCCTTGTACTTCATAGTTATCTTTCAATATGTGCTAAGGGTTCTTCGAATCTGCTCATTGTTAAAAGATGCTGCAAGGTCTTCTGGCATCCTCTCCGAAACTGCATGGGCTAAAGCTGCCTTTAATCTTTTTCTTTATATGCTAGCCAGTCATGTTGTTGGAGCCTTCTGGTACTTCTTTTCGATAGAAAGGAAAACATCTTGCTGGCGAAAATCTTGTAAAATGCATGCTATTGCTCATTGTTCGTTATATTGTGACGATAGTTTTGGAGCTAGCACTTTTCTGAATGACTCTTGTTCTCCAAAGACACCAAATTCCACATTTTTTGATTTTGGAATATACTTTGGTGCTCTTGAATCTGGTGTCATTGAATCAACAGATTTCTGGACAAAGATCTCTTACTGCTTTTGGTGGGGACTGCAGAACCTGAGTTCCCTGGGTCAAAGCCTCAAAACAAGTACCTATCTGTGGGAAGTCTACTTCTCAGTTTTTGTTTCACTCACTGGATTGATACTGTTTGCATTTCTGATTGGAAATATGCAGACATATTTGCAATCAAAAACAGCAAGGCTGGAGGAAATGAGATTGAAGGGGCAAGAGATAGAGTTGTGGATGGCCTTCCATTCCCTTCCTCGGAAGCTCAAGAAGCGAATATGGCAATACCAGAAATACAAATGGCAAGAAACTAAAGGTGTTGATGTGGAGAGTTTTCTTCGCAATCTTCCCCGGGACATCAGAACGCAAACAAAGCAGCATCTGTGTTCCGGTGCACTCAGTAAAGTTCCAATGCTTCAAAACATGGATAAACGTTTGCTTGAGGCAATATGTGATCATCTCAAGCCAGTGCTTTATATAGAGCACAGCTTCATACTACGGAAAGGTGACCCTCTTGATGAGATGTTGTTCATCACTCGCGGCAAGGTATTGACTTACACCACCGCAGGCAGAGAAGGTGCTGATTGTCTTGAAAAAGGTGACTTCTATGGCCAAGAACTTCTTGACTGGGTGCTCAAGACTCCCAATCCTAGCCTATCCAACCTTCCATTCTCAACTAAAACAGTCCAAGCGCACACAAAAGTTGAAGTGTTTGCTCTTAGGGCCAATGACTTGAAGAATGTAGTCTCCAAGTTCTGGTGGCTTTTCCCCAGCTCTGGTATGGAGCAATTACGCAAACCGAAGGCAGCTCAGGCTTTGCAAGCAGCATGGCGCCGCCGTAAACAGCTTCAAATTAAGGACTCCCCGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

629

Amino Acids

72.18

Weight (kDa)

9.54

Isoelectric Point (pI)

43.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 111 - 403 2.6e-16 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 145, 1845
AccB7I CCANNNNNTGG 1 cut(s) 1770
AccI GTMKAC 1 cut(s) 1116
AccII CGCG 1 cut(s) 1554
AccIII TCCGGA 1 cut(s) 511
AciI CCGC 4 cut(s) 5, 1554, 1578, 1849
AclI AACGTT 1 cut(s) 1447
AclWI GGATC 2 cut(s) 314, 327
AcoI YGGCCR 1 cut(s) 1624
AcsI RAATTY 4 cut(s) 63, 189, 234, 952
AcyI GRCGYC 1 cut(s) 1846
AfaI GTAC 5 cut(s) 551, 623, 647, 812, 1099
AfiI CCNNNNNNNGG 4 cut(s) 1107, 1272, 1770, 1790
AjnI CCWGG 1 cut(s) 1074
AjuI GAANNNNNNNTTGG 2 cut(s) 1667, 1699
AloI GAACNNNNNNTCC 2 cut(s) 1055, 1087
Alw21I GWGCWC 4 cut(s) 991, 1411, 1500, 1650
Alw26I GTCTC 2 cut(s) 136, 1765
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 2 cut(s) 314, 327
AlwNI CAGNNNCTG 3 cut(s) 271, 1066, 1396
Ama87I CYCGRG 1 cut(s) 1365
Aor13HI TCCGGA 1 cut(s) 511
AoxI GGCC 3 cut(s) 1254, 1624, 1737
ApaLI GTGCAC 1 cut(s) 1407
ApeKI GCWGC 6 cut(s) 119, 710, 755, 1390, 1820, 1838
ApoI RAATTY 4 cut(s) 63, 189, 234, 952
ArsI GACNNNNNNTTYG 2 cut(s) 887, 919
Asp700I GAANNNNTTC 1 cut(s) 63
AspLEI GCGC 4 cut(s) 252, 310, 1708, 1848
AspS9I GGNCC 1 cut(s) 1737
AsuC2I CCSGG 3 cut(s) 1366, 1367, 1880
AsuHPI GGTGA 4 cut(s) 47, 65, 1532, 1625
AsuII TTCGAA 3 cut(s) 156, 370, 685
AsuNHI GCTAGC 2 cut(s) 781, 911
AvaI CYCGRG 1 cut(s) 1365
BaeGI GKGCMC 1 cut(s) 1411
BalI TGGCCA 1 cut(s) 1626
BamHI GGATCC 1 cut(s) 319
BanI GGYRCC 2 cut(s) 145, 1845
BbsI GAAGAC 2 cut(s) 359, 711
Bbv12I GWGCWC 4 cut(s) 991, 1411, 1500, 1650
BbvI GCAGC 6 cut(s) 106, 697, 742, 1402, 1832, 1850
BccI CCATC 1 cut(s) 1246
BceAI ACGGC 1 cut(s) 1836
BciT130I CCWGG 1 cut(s) 1076
BciVI GTATCC 1 cut(s) 508
BclI TGATCA 1 cut(s) 1468
BcnI CCSGG 3 cut(s) 1366, 1367, 1880
BcoDI GTCTC 2 cut(s) 136, 1765
BfaI CTAG 4 cut(s) 462, 782, 912, 1665
BfmI CTRYAG 3 cut(s) 393, 399, 1058
BfoI RGCGCY 2 cut(s) 253, 1849
BfuI GTATCC 1 cut(s) 508
BglII AGATCT 1 cut(s) 1032
BisI GCNGC 8 cut(s) 120, 711, 756, 1391, 1555, 1821, 1839, 1849
BlsI GCNGC 8 cut(s) 121, 712, 757, 1392, 1556, 1822, 1840, 1850
Bme1390I CCNGG 4 cut(s) 1076, 1366, 1367, 1880
BmeT110I CYCGRG 1 cut(s) 1365
BmgT120I GGNCC 1 cut(s) 1737
BmiI GGNNCC 5 cut(s) 147, 321, 510, 802, 1847
BmrFI CCNGG 4 cut(s) 1076, 1366, 1367, 1880
BmrI ACTGGG 2 cut(s) 124, 1651
BmsI GCATC 4 cut(s) 113, 697, 735, 1402
BmtI GCTAGC 2 cut(s) 785, 915
BmuI ACTGGG 2 cut(s) 124, 1651
BpiI GAAGAC 2 cut(s) 359, 711
BpmI CTGGAG 1 cut(s) 1232
Bpu10I CCTNAGC 2 cut(s) 674, 1824
Bpu14I TTCGAA 3 cut(s) 156, 370, 685
BpuEI CTTGAG 5 cut(s) 238, 1265, 1460, 1475, 1634
BpuMI CCSGG 3 cut(s) 1366, 1367, 1880
BsaHI GRCGYC 1 cut(s) 1846
BsaJI CCNNGG 6 cut(s) 1074, 1075, 1271, 1364, 1365, 1878
BsaWI WCCGGW 2 cut(s) 511, 1403
Bsc4I CCNNNNNNNGG 4 cut(s) 1107, 1272, 1770, 1790
Bse1I ACTGG 7 cut(s) 119, 321, 510, 786, 1147, 1481, 1646
Bse3DI GCAATG 1 cut(s) 303
BseAI TCCGGA 1 cut(s) 511
BseBI CCWGG 1 cut(s) 1076
BseDI CCNNGG 6 cut(s) 1074, 1075, 1271, 1364, 1365, 1878
BseGI GGATG 3 cut(s) 564, 726, 1257
BseLI CCNNNNNNNGG 4 cut(s) 1107, 1272, 1770, 1790
BseMI GCAATG 1 cut(s) 303
BseMII CTCAG 6 cut(s) 20, 533, 1058, 1137, 1426, 1838
BseNI ACTGG 7 cut(s) 119, 321, 510, 786, 1147, 1481, 1646
BseRI GAGGAG 2 cut(s) 426, 510
BseSI GKGCMC 1 cut(s) 1411
BseXI GCAGC 6 cut(s) 106, 697, 742, 1402, 1832, 1850
BseYI CCCAGC 1 cut(s) 1784
Bsh1236I CGCG 1 cut(s) 1554
BshFI GGCC 3 cut(s) 1256, 1626, 1739
BshNI GGYRCC 2 cut(s) 145, 1845
BsiHKAI GWGCWC 4 cut(s) 991, 1411, 1500, 1650
BsiHKCI CYCGRG 1 cut(s) 1365
BsiSI CCGG 4 cut(s) 512, 1366, 1404, 1880
BslFI GGGAC 2 cut(s) 1068, 1382
BslI CCNNNNNNNGG 4 cut(s) 1107, 1272, 1770, 1790
BsmAI GTCTC 2 cut(s) 136, 1765
BsmBI CGTCTC 1 cut(s) 136
BsmFI GGGAC 2 cut(s) 1068, 1382
BsnI GGCC 3 cut(s) 1256, 1626, 1739
BsoBI CYCGRG 1 cut(s) 1365
Bsp119I TTCGAA 3 cut(s) 156, 370, 685
Bsp1286I GDGCHC 4 cut(s) 991, 1411, 1500, 1650
Bsp13I TCCGGA 1 cut(s) 511
Bsp143I GATC 3 cut(s) 319, 1032, 1468
BspACI CCGC 4 cut(s) 5, 1554, 1578, 1849
BspANI GGCC 3 cut(s) 1256, 1626, 1739
BspCNI CTCAG 6 cut(s) 21, 532, 1059, 1136, 1425, 1837
BspEI TCCGGA 1 cut(s) 511
BspFNI CGCG 1 cut(s) 1554
BspHI TCATGA 1 cut(s) 238
BspLI GGNNCC 5 cut(s) 147, 321, 510, 802, 1847
BspMAI CTGCAG 1 cut(s) 1062
BspOI GCTAGC 2 cut(s) 785, 915
BspPI GGATC 2 cut(s) 314, 327
BspT104I TTCGAA 3 cut(s) 156, 370, 685
BspT107I GGYRCC 2 cut(s) 145, 1845
BsrDI GCAATG 1 cut(s) 303
BsrI ACTGG 7 cut(s) 119, 321, 510, 786, 1147, 1481, 1646
BssECI CCNNGG 6 cut(s) 1074, 1075, 1271, 1364, 1365, 1878
BssMI GATC 3 cut(s) 319, 1032, 1468
BssNI GRCGYC 1 cut(s) 1846
Bst2UI CCWGG 1 cut(s) 1076
Bst4CI ACNGT 5 cut(s) 273, 403, 639, 1155, 1699
BstACI GRCGYC 1 cut(s) 1846
BstBI TTCGAA 3 cut(s) 156, 370, 685
BstC8I GCNNGC 7 cut(s) 248, 783, 845, 867, 913, 1582, 1836
BstDEI CTNAG 8 cut(s) 29, 519, 674, 1067, 1123, 1412, 1733, 1824
BstEII GGTNACC 1 cut(s) 1520
BstF5I GGATG 3 cut(s) 564, 726, 1257
BstFNI CGCG 1 cut(s) 1554
BstH2I RGCGCY 2 cut(s) 253, 1849
BstHHI GCGC 4 cut(s) 252, 310, 1708, 1848
BstKTI GATC 3 cut(s) 322, 1035, 1471
BstMAI GTCTC 2 cut(s) 136, 1765
BstMBI GATC 3 cut(s) 319, 1032, 1468
BstMWI GCNNNNNNNGC 8 cut(s) 101, 755, 1285, 1294, 1387, 1736, 1826, 1835
BstNI CCWGG 1 cut(s) 1076
BstNSI RCATGY 1 cut(s) 869
BstPI GGTNACC 1 cut(s) 1520
BstSCI CCNGG 4 cut(s) 1074, 1364, 1365, 1878
BstSFI CTRYAG 3 cut(s) 393, 399, 1058
BstSLI GKGCMC 1 cut(s) 1411
BstUI CGCG 1 cut(s) 1554
BstV1I GCAGC 6 cut(s) 106, 697, 742, 1402, 1832, 1850
BstV2I GAAGAC 2 cut(s) 359, 711
BstX2I RGATCY 2 cut(s) 319, 1032
BstYI RGATCY 2 cut(s) 319, 1032
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 3 cut(s) 1256, 1626, 1739
BtsCI GGATG 3 cut(s) 564, 726, 1257
BtsIMutI CAGTG 4 cut(s) 114, 314, 1140, 1488
Cac8I GCNNGC 7 cut(s) 248, 783, 845, 867, 913, 1582, 1836
CaiI CAGNNNCTG 3 cut(s) 271, 1066, 1396
CciI TCATGA 1 cut(s) 238
CfoI GCGC 4 cut(s) 252, 310, 1708, 1848
Cfr13I GGNCC 1 cut(s) 1737
Cfr9I CCCGGG 1 cut(s) 1365
CseI GACGC 1 cut(s) 292
Csp6I GTAC 5 cut(s) 550, 622, 646, 811, 1098
CspCI CAANNNNNGTGG 2 cut(s) 946, 981
CviAII CATG 8 cut(s) 184, 239, 629, 744, 791, 866, 1438, 1842
CviQI GTAC 5 cut(s) 550, 622, 646, 811, 1098
DdeI CTNAG 8 cut(s) 29, 519, 674, 1067, 1123, 1412, 1733, 1824
DinI GGCGCC 1 cut(s) 1847
DpnI GATC 3 cut(s) 321, 1034, 1470
DpnII GATC 3 cut(s) 319, 1032, 1468
EaeI YGGCCR 1 cut(s) 1624
Eco88I CYCGRG 1 cut(s) 1365
Eco91I GGTNACC 1 cut(s) 1520
EcoO65I GGTNACC 1 cut(s) 1520
EcoRI GAATTC 1 cut(s) 63
EcoRII CCWGG 1 cut(s) 1074
EcoT22I ATGCAT 1 cut(s) 867
EgeI GGCGCC 1 cut(s) 1847
EheI GGCGCC 1 cut(s) 1847
Esp3I CGTCTC 1 cut(s) 136
FaeI CATG 8 cut(s) 187, 242, 632, 747, 794, 869, 1441, 1845
FalI AAGNNNNNCTT 2 cut(s) 1620, 1652
FaqI GGGAC 2 cut(s) 1068, 1382
FatI CATG 8 cut(s) 183, 238, 628, 743, 790, 865, 1437, 1841
FbaI TGATCA 1 cut(s) 1468
FblI GTMKAC 1 cut(s) 1116
Fnu4HI GCNGC 8 cut(s) 120, 711, 756, 1391, 1555, 1821, 1839, 1849
FokI GGATG 3 cut(s) 551, 713, 1264
Fsp4HI GCNGC 8 cut(s) 120, 711, 756, 1391, 1555, 1821, 1839, 1849
FspBI CTAG 4 cut(s) 462, 782, 912, 1665
GlaI GCGC 4 cut(s) 251, 309, 1707, 1847
GluI GCNGC 8 cut(s) 120, 711, 756, 1391, 1555, 1821, 1839, 1849
GsaI CCCAGC 1 cut(s) 1788
GsuI CTGGAG 1 cut(s) 1232
HaeII RGCGCY 2 cut(s) 253, 1849
HaeIII GGCC 3 cut(s) 1256, 1626, 1739
HapII CCGG 4 cut(s) 512, 1366, 1404, 1880
HgaI GACGC 1 cut(s) 292
HhaI GCGC 4 cut(s) 252, 310, 1708, 1848
Hin1I GRCGYC 1 cut(s) 1846
Hin1II CATG 8 cut(s) 187, 242, 632, 747, 794, 869, 1441, 1845
Hin6I GCGC 4 cut(s) 250, 308, 1706, 1846
HinP1I GCGC 4 cut(s) 250, 308, 1706, 1846
HinfI GANTC 6 cut(s) 687, 929, 995, 1010, 1654, 1874
HpaII CCGG 4 cut(s) 512, 1366, 1404, 1880
HphI GGTGA 4 cut(s) 47, 65, 1532, 1625
Hpy166II GTNNAC 5 cut(s) 112, 503, 1117, 1409, 1856
Hpy188I TCNGA 5 cut(s) 736, 924, 1167, 1275, 1376
Hpy8I GTNNAC 5 cut(s) 112, 503, 1117, 1409, 1856
HpyAV CCTTC 8 cut(s) 152, 814, 1222, 1267, 1277, 1583, 1688, 1810
HpyCH4III ACNGT 5 cut(s) 273, 403, 639, 1155, 1699
HpyCH4IV ACGT 2 cut(s) 129, 1447
HpyF10VI GCNNNNNNNGC 8 cut(s) 101, 755, 1285, 1294, 1387, 1736, 1826, 1835
HpyF3I CTNAG 8 cut(s) 29, 519, 674, 1067, 1123, 1412, 1733, 1824
HpySE526I ACGT 2 cut(s) 129, 1447
Hsp92I GRCGYC 1 cut(s) 1846
Hsp92II CATG 8 cut(s) 187, 242, 632, 747, 794, 869, 1441, 1845
HspAI GCGC 4 cut(s) 250, 308, 1706, 1846
KasI GGCGCC 1 cut(s) 1845
Kpn2I TCCGGA 1 cut(s) 511
Ksp22I TGATCA 1 cut(s) 1468
Kzo9I GATC 3 cut(s) 319, 1032, 1468
LmnI GCTCC 4 cut(s) 514, 800, 908, 1798
Lsp1109I GCAGC 6 cut(s) 106, 697, 742, 1402, 1832, 1850
LweI GCATC 4 cut(s) 113, 697, 735, 1402
MaeI CTAG 4 cut(s) 462, 782, 912, 1665
MaeII ACGT 2 cut(s) 129, 1447
MaeIII GTNAC 4 cut(s) 469, 893, 1520, 1613
MalI GATC 3 cut(s) 321, 1034, 1470
MboI GATC 3 cut(s) 319, 1032, 1468
MboII GAAGA 9 cut(s) 56, 359, 418, 569, 674, 711, 1343, 1352, 1762
MflI RGATCY 2 cut(s) 319, 1032
MhlI GDGCHC 4 cut(s) 991, 1411, 1500, 1650
MlsI TGGCCA 1 cut(s) 1626
MluCI AATT 9 cut(s) 63, 189, 234, 383, 452, 573, 952, 1802, 1866
MluNI TGGCCA 1 cut(s) 1626
Mly113I GGCGCC 1 cut(s) 1846
MlyI GAGTC 3 cut(s) 923, 1648, 1868
MmeI TCCRAC 2 cut(s) 778, 1698
Mox20I TGGCCA 1 cut(s) 1626
Mph1103I ATGCAT 1 cut(s) 867
MroI TCCGGA 1 cut(s) 511
MroXI GAANNNNTTC 1 cut(s) 63
MscI TGGCCA 1 cut(s) 1626
MseI TTAA 6 cut(s) 348, 386, 701, 762, 1869, 1885
Msp20I TGGCCA 1 cut(s) 1626
MspI CCGG 4 cut(s) 512, 1366, 1404, 1880
MspR9I CCNGG 4 cut(s) 1076, 1366, 1367, 1880
MvaI CCWGG 1 cut(s) 1076
MvnI CGCG 1 cut(s) 1554
MwoI GCNNNNNNNGC 8 cut(s) 101, 755, 1285, 1294, 1387, 1736, 1826, 1835
NarI GGCGCC 1 cut(s) 1846
NciI CCSGG 3 cut(s) 1366, 1367, 1880
NdeII GATC 3 cut(s) 319, 1032, 1468
NheI GCTAGC 2 cut(s) 781, 911
NlaIII CATG 8 cut(s) 187, 242, 632, 747, 794, 869, 1441, 1845
NlaIV GGNNCC 5 cut(s) 147, 321, 510, 802, 1847
NmuCI GTSAC 4 cut(s) 469, 893, 1520, 1613
NsiI ATGCAT 1 cut(s) 867
NspI RCATGY 1 cut(s) 869
NspV TTCGAA 3 cut(s) 156, 370, 685
PaeI GCATGC 1 cut(s) 869
PagI TCATGA 1 cut(s) 238
PasI CCCWGGG 1 cut(s) 1075
PdmI GAANNNNTTC 1 cut(s) 63
PfeI GAWTC 3 cut(s) 687, 995, 1010
PflMI CCANNNNNTGG 1 cut(s) 1770
PkrI GCNGC 8 cut(s) 121, 712, 757, 1392, 1556, 1822, 1840, 1850
PleI GAGTC 3 cut(s) 923, 1648, 1868
PluTI GGCGCC 1 cut(s) 1849
PpsI GAGTC 3 cut(s) 923, 1648, 1868
Psp1406I AACGTT 1 cut(s) 1447
Psp6I CCWGG 1 cut(s) 1074
PspEI GGTNACC 1 cut(s) 1520
PspFI CCCAGC 1 cut(s) 1784
PspGI CCWGG 1 cut(s) 1074
PspN4I GGNNCC 5 cut(s) 147, 321, 510, 802, 1847
PspPI GGNCC 1 cut(s) 1737
PstI CTGCAG 1 cut(s) 1062
PstNI CAGNNNCTG 3 cut(s) 271, 1066, 1396
PsuI RGATCY 2 cut(s) 319, 1032
RsaI GTAC 5 cut(s) 551, 623, 647, 812, 1099
RsaNI GTAC 5 cut(s) 550, 622, 646, 811, 1098
SaqAI TTAA 6 cut(s) 348, 386, 701, 762, 1869, 1885
SatI GCNGC 8 cut(s) 120, 711, 756, 1391, 1555, 1821, 1839, 1849
Sau3AI GATC 3 cut(s) 319, 1032, 1468
Sau96I GGNCC 1 cut(s) 1737
SchI GAGTC 3 cut(s) 923, 1648, 1868
ScrFI CCNGG 4 cut(s) 1076, 1366, 1367, 1880
SduI GDGCHC 4 cut(s) 991, 1411, 1500, 1650
SfaNI GCATC 4 cut(s) 113, 697, 735, 1402
SfcI CTRYAG 3 cut(s) 393, 399, 1058
SfoI GGCGCC 1 cut(s) 1847
SfuI TTCGAA 3 cut(s) 156, 370, 685
SmaI CCCGGG 1 cut(s) 1367
SmlI CTYRAG 5 cut(s) 217, 1280, 1454, 1475, 1649
SmoI CTYRAG 5 cut(s) 217, 1280, 1454, 1475, 1649
SphI GCATGC 1 cut(s) 869
Sse9I AATT 9 cut(s) 63, 189, 234, 383, 452, 573, 952, 1802, 1866
SsiI CCGC 4 cut(s) 5, 1554, 1578, 1849
SspDI GGCGCC 1 cut(s) 1845
SspMI CTAG 4 cut(s) 462, 782, 912, 1665
StyD4I CCNGG 4 cut(s) 1074, 1364, 1365, 1878
TaaI ACNGT 5 cut(s) 273, 403, 639, 1155, 1699
TaiI ACGT 2 cut(s) 132, 1450
TaqI TCGA 6 cut(s) 156, 370, 491, 561, 685, 821
TasI AATT 9 cut(s) 63, 189, 234, 383, 452, 573, 952, 1802, 1866
TatI WGTACW 3 cut(s) 549, 621, 645
TauI GCSGC 2 cut(s) 1557, 1851
TfiI GAWTC 3 cut(s) 687, 995, 1010
Tru1I TTAA 6 cut(s) 348, 386, 701, 762, 1869, 1885
Tru9I TTAA 6 cut(s) 348, 386, 701, 762, 1869, 1885
TscAI CASTG 4 cut(s) 114, 321, 1147, 1488
TseFI GTSAC 4 cut(s) 469, 893, 1520, 1613
TseI GCWGC 6 cut(s) 119, 710, 755, 1390, 1820, 1838
Tsp45I GTSAC 4 cut(s) 469, 893, 1520, 1613
TspDTI ATGAA 7 cut(s) 72, 200, 227, 544, 640, 1495, 1534
TspGWI ACGGA 1 cut(s) 1528
TspMI CCCGGG 1 cut(s) 1365
TspRI CASTG 4 cut(s) 114, 321, 1147, 1488
Van91I CCANNNNNTGG 1 cut(s) 1770
VneI GTGCAC 1 cut(s) 1407
XapI RAATTY 4 cut(s) 63, 189, 234, 952
XceI RCATGY 1 cut(s) 869
XcmI CCANNNNNNNNNTGG 1 cut(s) 1792
XmaI CCCGGG 1 cut(s) 1365
XmiI GTMKAC 1 cut(s) 1116
XmnI GAANNNNTTC 1 cut(s) 63
XspI CTAG 4 cut(s) 462, 782, 912, 1665
Zsp2I ATGCAT 1 cut(s) 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.