Rroxscaffold_4G00279500

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000755
Physical Location & Seq
Reverse (-)
2296152 .. 2298807
2656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00279500.1

Sequence Viewer

Length: 1836 bp
ATGTATGCTAAGCTATTAAGTTTGTTTTGCTCTATGGCTTTATATAGGATACAGAGTGGTGATATAGAAGAAAATGGTGAAGAACTAATTCAAAAAGCTAATAGTAATCATTCAAGTGCAAGTTTAGCATCAGTGGACTCGGCTGTCGATAAGGTCTATAGAGCTATGGGGCCTGGTTTTGAAGGGCTAAAGAGCTTTAGGAAAACCATGAAAATCTATTATGAAGTTTTGTCTATAGGCTTGAGTTCCAATGATAAAATTCTTTACCGCCGGGAATTAATCCAGCACAGGTGGAATAAGATGCTTCTTGTTCTGTGTGTCATTGCTCTCTCACTGGATCCTTTGTTTTGTTATATTCTTTTGGTCAATGATGAGAAGAAGTGCCTTGGATTGGACAGAACGTTAGGAGCTATAGCTAGTGTTCTGCGATTTGTCGTGGATTTCTTTTATGTGTTTTATATCATTTATCAATTTCGTGCTAGTGTTGTCACTCTTTGTTCTCAATCATCGAAAGAAGGTGAACTGGTTCCACATACTCGGGCAAGAGCATGGAGATATTTGTTGTTGTACTTCATATTCGACATCCTTGTAATTCTTCCACTTCCACAGGTGATAGTTTATGTTATCATTCCAAGATTGAATAACTCGAGACTTTTCCATGCAACACAGTCATTGTACTTCATAGTTATCTTTCAATACGTGCTAAGGGTTCTTCGAATCTGCTCATTGTTAAAAGAAGCCACAAGTTCTTCGGGCATCCTTGCTGAAACTGCATGGGCTAAAGCTGCCTTTAATCTTTTTCTTTATATGCTTGCCAGTCATAAAGGAAAACATCTTGCTGGCGAAAATCCTGTAAAATGCATGCTACTGCTCACTGTTCGTGCTCTTGAATCTGGTGTCATCGAATCAACAGATTTCATGACAAAGATCTCTTACTGCTTTTGGTGGGGACTGCAAAACCTGAGTTCCCTAGGTCAAAGCCTCAAAACAAGTACCTATGTCTGGGAAGTCTACTTCTCAGTTTTTGTTTCACTTTCTGGATTGATACTGTTTGCATTTCTTATTGGAAATATGCAGACATATTTGCAATCGAAAACAGCAAGGCTGGAGGAAATGAGATTGAAGGGACAAGAGATAGAGTTGTGGATGGCCTTCCATTCCCTTCCTCGGAAGCTCAAGAAGCGAATATGGCAATACCAGAAATACAAATGGCAAGAAACTAAAGGTGTTGATGTGGAGAATTTTCTTCACAATCTTCCCCGGGACATCAGAAGGGAAACAAAGCAGTATCTATGCTCTGGTCCACTTAGTCAAGTTCCAATGCTTCAAAATATGGATAAACGATTGCTTGATGCAATATGTGATCATCTGAAGCCGGCACTTTACATAGAGCACAGCTTCATACTTCGGAAAGGAGACCCTCTCGATGAGATGTTGTTCATCACTCGTGGCAAAGTATTGACTTACACCACAGAAGGCAATGTAGGCGCTGATTGTCTTGAAAAGGGTGACTTCTATGGCCAAGAACTTCTTGATTGGGTGCTCAAGACTTACCCCAATGCCAGCCTATCCAACCTTCCCTTCTCAACCAAAACAGTCCAAGCGCATACCAAAGTTGAAGTGTTTGCTCTAAGGGCTAATGACTTGAAGAATGTCGTCTCTAAGTTCTGGTGGCTTTTCCCCAGTTTGGACCAATCACGCCAACCAAGGGCAGCTCATGCTTTGCAAGCAGCATGGCGCCGCTATAAACAGCTTCAAAAGACTCCCCCGTCTAAGGAGGGCAGTGTTTCTCGCACTGACCATGCTGTAGTCCCAGAACCCATGATAGCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

611

Amino Acids

70.23

Weight (kDa)

9.27

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 117 - 368 2.2e-07 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 143, 1768
AccB1I GGYRCC 1 cut(s) 1737
AccI GTMKAC 1 cut(s) 1011
AciI CCGC 2 cut(s) 268, 1741
AclI AACGTT 1 cut(s) 401
AclWI GGATC 2 cut(s) 332, 345
AcoI YGGCCR 1 cut(s) 1519
AcsI RAATTY 2 cut(s) 258, 1240
AcuI CTGAAG 1 cut(s) 1391
AcyI GRCGYC 1 cut(s) 1738
AfaI GTAC 3 cut(s) 569, 677, 994
AfiI CCNNNNNNNGG 6 cut(s) 391, 1002, 1167, 1687, 1708, 1774
AjnI CCWGG 1 cut(s) 172
AjuI GAANNNNNNNTTGG 2 cut(s) 1565, 1597
Alw21I GWGCWC 3 cut(s) 886, 1395, 1545
Alw26I GTCTC 3 cut(s) 643, 1410, 1663
AlwI GGATC 2 cut(s) 332, 345
Ama87I CYCGRG 3 cut(s) 537, 646, 1260
AoxI GGCC 3 cut(s) 170, 1149, 1519
ApeKI GCWGC 3 cut(s) 785, 1712, 1730
ApoI RAATTY 2 cut(s) 258, 1240
AseI ATTAAT 1 cut(s) 278
Asp700I GAANNNNTTC 2 cut(s) 87, 525
AspA2I CCTAGG 1 cut(s) 970
AspLEI GCGC 3 cut(s) 1490, 1606, 1740
AspS9I GGNCC 3 cut(s) 170, 1301, 1690
AsuC2I CCSGG 3 cut(s) 272, 1261, 1262
AsuHPI GGTGA 5 cut(s) 71, 89, 530, 622, 1520
AsuII TTCGAA 1 cut(s) 715
AvaI CYCGRG 3 cut(s) 537, 646, 1260
AvaII GGWCC 2 cut(s) 1301, 1690
AvrII CCTAGG 1 cut(s) 970
BalI TGGCCA 1 cut(s) 1521
BamHI GGATCC 1 cut(s) 337
BanI GGYRCC 1 cut(s) 1737
BauI CACGAG 1 cut(s) 1446
Bbv12I GWGCWC 3 cut(s) 886, 1395, 1545
BbvI GCAGC 3 cut(s) 772, 1724, 1742
BccI CCATC 1 cut(s) 1141
BciT130I CCWGG 1 cut(s) 174
BciVI GTATCC 1 cut(s) 42
BclI TGATCA 1 cut(s) 1363
BcnI CCSGG 3 cut(s) 272, 1261, 1262
BcoDI GTCTC 3 cut(s) 643, 1410, 1663
BfaI CTAG 3 cut(s) 417, 480, 971
BfmI CTRYAG 4 cut(s) 157, 234, 411, 1806
BfoI RGCGCY 2 cut(s) 1491, 1741
BfuI GTATCC 1 cut(s) 42
BglII AGATCT 1 cut(s) 927
BisI GCNGC 4 cut(s) 786, 1713, 1731, 1741
BlnI CCTAGG 1 cut(s) 970
BlpI GCTNAGC 1 cut(s) 9
BlsI GCNGC 4 cut(s) 787, 1714, 1732, 1742
Bme1390I CCNGG 4 cut(s) 174, 272, 1261, 1262
Bme18I GGWCC 2 cut(s) 1301, 1690
BmeT110I CYCGRG 3 cut(s) 537, 646, 1260
BmgT120I GGNCC 3 cut(s) 170, 1301, 1690
BmiI GGNNCC 4 cut(s) 171, 339, 528, 1739
BmrFI CCNGG 4 cut(s) 174, 272, 1261, 1262
BmrI ACTGGG 1 cut(s) 1677
BmsI GCATC 4 cut(s) 137, 291, 765, 1342
BmuI ACTGGG 1 cut(s) 1677
BplI GAGNNNNNCTC 2 cut(s) 1407, 1439
BpmI CTGGAG 1 cut(s) 1127
Bpu10I CCTNAGC 1 cut(s) 704
Bpu1102I GCTNAGC 1 cut(s) 9
Bpu14I TTCGAA 1 cut(s) 715
BpuEI CTTGAG 3 cut(s) 262, 1160, 1529
BpuMI CCSGG 3 cut(s) 272, 1261, 1262
BsaAI YACGTR 1 cut(s) 700
BsaHI GRCGYC 1 cut(s) 1738
BsaI GGTCTC 1 cut(s) 1410
BsaJI CCNNGG 6 cut(s) 385, 970, 1166, 1259, 1260, 1706
Bsc4I CCNNNNNNNGG 6 cut(s) 391, 1002, 1167, 1687, 1708, 1774
Bse118I RCCGGY 1 cut(s) 1375
Bse1I ACTGG 4 cut(s) 339, 528, 816, 1683
Bse3DI GCAATG 2 cut(s) 321, 1486
BseBI CCWGG 1 cut(s) 174
BseDI CCNNGG 6 cut(s) 385, 970, 1166, 1259, 1260, 1706
BseGI GGATG 3 cut(s) 582, 756, 1152
BseLI CCNNNNNNNGG 6 cut(s) 391, 1002, 1167, 1687, 1708, 1774
BseMI GCAATG 2 cut(s) 321, 1486
BseMII CTCAG 2 cut(s) 953, 1032
BseNI ACTGG 4 cut(s) 339, 528, 816, 1683
BseXI GCAGC 3 cut(s) 772, 1724, 1742
BshFI GGCC 3 cut(s) 172, 1151, 1521
BshNI GGYRCC 1 cut(s) 1737
BsiHKAI GWGCWC 3 cut(s) 886, 1395, 1545
BsiHKCI CYCGRG 3 cut(s) 537, 646, 1260
BsiSI CCGG 3 cut(s) 271, 1261, 1376
BslFI GGGAC 4 cut(s) 963, 1140, 1277, 1796
BslI CCNNNNNNNGG 6 cut(s) 391, 1002, 1167, 1687, 1708, 1774
BsmAI GTCTC 3 cut(s) 643, 1410, 1663
BsmBI CGTCTC 1 cut(s) 1663
BsmFI GGGAC 4 cut(s) 963, 1140, 1277, 1796
BsnI GGCC 3 cut(s) 172, 1151, 1521
Bso31I GGTCTC 1 cut(s) 1410
BsoBI CYCGRG 3 cut(s) 537, 646, 1260
Bsp119I TTCGAA 1 cut(s) 715
Bsp1286I GDGCHC 3 cut(s) 886, 1395, 1545
Bsp143I GATC 3 cut(s) 337, 927, 1363
Bsp1720I GCTNAGC 1 cut(s) 9
BspACI CCGC 2 cut(s) 268, 1741
BspANI GGCC 3 cut(s) 172, 1151, 1521
BspCNI CTCAG 2 cut(s) 954, 1031
BspHI TCATGA 1 cut(s) 918
BspLI GGNNCC 4 cut(s) 171, 339, 528, 1739
BspPI GGATC 2 cut(s) 332, 345
BspT104I TTCGAA 1 cut(s) 715
BspT107I GGYRCC 1 cut(s) 1737
BspTNI GGTCTC 1 cut(s) 1410
BsrDI GCAATG 2 cut(s) 321, 1486
BsrFI RCCGGY 1 cut(s) 1375
BsrI ACTGG 4 cut(s) 339, 528, 816, 1683
BssAI RCCGGY 1 cut(s) 1375
BssECI CCNNGG 6 cut(s) 385, 970, 1166, 1259, 1260, 1706
BssMI GATC 3 cut(s) 337, 927, 1363
BssNI GRCGYC 1 cut(s) 1738
BssSI CACGAG 1 cut(s) 1446
BssT1I CCWWGG 3 cut(s) 385, 970, 1706
Bst2BI CACGAG 1 cut(s) 1446
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 4 cut(s) 669, 877, 1050, 1597
BstACI GRCGYC 1 cut(s) 1738
BstAPI GCANNNNNTGC 1 cut(s) 1718
BstBAI YACGTR 1 cut(s) 700
BstBI TTCGAA 1 cut(s) 715
BstC8I GCNNGC 6 cut(s) 813, 841, 863, 1377, 1564, 1728
BstDEI CTNAG 8 cut(s) 9, 704, 962, 1018, 1307, 1631, 1662, 1773
BstF5I GGATG 3 cut(s) 582, 756, 1152
BstH2I RGCGCY 2 cut(s) 1491, 1741
BstHHI GCGC 3 cut(s) 1490, 1606, 1740
BstKTI GATC 3 cut(s) 340, 930, 1366
BstMAI GTCTC 3 cut(s) 643, 1410, 1663
BstMBI GATC 3 cut(s) 337, 927, 1363
BstMWI GCNNNNNNNGC 9 cut(s) 125, 770, 785, 1180, 1189, 1485, 1634, 1718, 1727
BstNI CCWGG 1 cut(s) 174
BstNSI RCATGY 1 cut(s) 865
BstSCI CCNGG 4 cut(s) 172, 270, 1259, 1260
BstSFI CTRYAG 4 cut(s) 157, 234, 411, 1806
BstV1I GCAGC 3 cut(s) 772, 1724, 1742
BstX2I RGATCY 2 cut(s) 337, 927
BstYI RGATCY 2 cut(s) 337, 927
BsuI GTATCC 1 cut(s) 42
BsuRI GGCC 3 cut(s) 172, 1151, 1521
BtsCI GGATG 3 cut(s) 582, 756, 1152
BtsI GCAGTG 1 cut(s) 1789
BtsIMutI CAGTG 5 cut(s) 138, 332, 873, 1789, 1794
Cac8I GCNNGC 6 cut(s) 813, 841, 863, 1377, 1564, 1728
CciI TCATGA 1 cut(s) 918
CfoI GCGC 3 cut(s) 1490, 1606, 1740
Cfr10I RCCGGY 1 cut(s) 1375
Cfr13I GGNCC 3 cut(s) 170, 1301, 1690
Cfr9I CCCGGG 1 cut(s) 1260
Csp6I GTAC 3 cut(s) 568, 676, 993
CviQI GTAC 3 cut(s) 568, 676, 993
DdeI CTNAG 8 cut(s) 9, 704, 962, 1018, 1307, 1631, 1662, 1773
DinI GGCGCC 1 cut(s) 1739
DpnI GATC 3 cut(s) 339, 929, 1365
DpnII GATC 3 cut(s) 337, 927, 1363
DrdI GACNNNNNNGTC 2 cut(s) 143, 1768
DseDI GACNNNNNNGTC 2 cut(s) 143, 1768
EaeI YGGCCR 1 cut(s) 1519
Eco130I CCWWGG 3 cut(s) 385, 970, 1706
Eco31I GGTCTC 1 cut(s) 1410
Eco47I GGWCC 2 cut(s) 1301, 1690
Eco57I CTGAAG 1 cut(s) 1391
Eco88I CYCGRG 3 cut(s) 537, 646, 1260
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 172
EcoT14I CCWWGG 3 cut(s) 385, 970, 1706
EcoT22I ATGCAT 1 cut(s) 863
EgeI GGCGCC 1 cut(s) 1739
EheI GGCGCC 1 cut(s) 1739
ErhI CCWWGG 3 cut(s) 385, 970, 1706
Esp3I CGTCTC 1 cut(s) 1663
FalI AAGNNNNNCTT 4 cut(s) 1496, 1528, 1515, 1547
FaqI GGGAC 4 cut(s) 963, 1140, 1277, 1796
FbaI TGATCA 1 cut(s) 1363
FblI GTMKAC 1 cut(s) 1011
Fnu4HI GCNGC 4 cut(s) 786, 1713, 1731, 1741
FokI GGATG 3 cut(s) 569, 743, 1159
Fsp4HI GCNGC 4 cut(s) 786, 1713, 1731, 1741
FspBI CTAG 3 cut(s) 417, 480, 971
GlaI GCGC 3 cut(s) 1489, 1605, 1739
GluI GCNGC 4 cut(s) 786, 1713, 1731, 1741
GsuI CTGGAG 1 cut(s) 1127
HaeII RGCGCY 2 cut(s) 1491, 1741
HaeIII GGCC 3 cut(s) 172, 1151, 1521
HapII CCGG 3 cut(s) 271, 1261, 1376
HhaI GCGC 3 cut(s) 1490, 1606, 1740
Hin1I GRCGYC 1 cut(s) 1738
Hin6I GCGC 3 cut(s) 1488, 1604, 1738
HinP1I GCGC 3 cut(s) 1488, 1604, 1738
HinfI GANTC 5 cut(s) 137, 717, 890, 905, 1762
HpaII CCGG 3 cut(s) 271, 1261, 1376
HphI GGTGA 5 cut(s) 71, 89, 530, 622, 1520
Hpy166II GTNNAC 4 cut(s) 136, 521, 1012, 1304
Hpy188I TCNGA 4 cut(s) 1170, 1271, 1371, 1410
Hpy188III TCNNGA 9 cut(s) 648, 887, 919, 1038, 1177, 1424, 1499, 1532, 1546
Hpy8I GTNNAC 4 cut(s) 136, 521, 1012, 1304
HpyAV CCTTC 9 cut(s) 176, 509, 1117, 1162, 1172, 1266, 1469, 1586, 1591
HpyCH4III ACNGT 4 cut(s) 669, 877, 1050, 1597
HpyCH4IV ACGT 2 cut(s) 401, 699
HpyF10VI GCNNNNNNNGC 9 cut(s) 125, 770, 785, 1180, 1189, 1485, 1634, 1718, 1727
HpyF3I CTNAG 8 cut(s) 9, 704, 962, 1018, 1307, 1631, 1662, 1773
HpySE526I ACGT 2 cut(s) 401, 699
Hsp92I GRCGYC 1 cut(s) 1738
HspAI GCGC 3 cut(s) 1488, 1604, 1738
KasI GGCGCC 1 cut(s) 1737
KroI GCCGGC 1 cut(s) 1375
KroNI GCCGGC 1 cut(s) 1377
Ksp22I TGATCA 1 cut(s) 1363
Kzo9I GATC 3 cut(s) 337, 927, 1363
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 3 cut(s) 772, 1724, 1742
LweI GCATC 4 cut(s) 137, 291, 765, 1342
MaeI CTAG 3 cut(s) 417, 480, 971
MaeII ACGT 2 cut(s) 401, 699
MaeIII GTNAC 2 cut(s) 487, 1508
MalI GATC 3 cut(s) 339, 929, 1365
MboI GATC 3 cut(s) 337, 927, 1363
MboII GAAGA 9 cut(s) 80, 92, 388, 587, 704, 741, 1238, 1247, 1660
MflI RGATCY 2 cut(s) 337, 927
MhlI GDGCHC 3 cut(s) 886, 1395, 1545
MlsI TGGCCA 1 cut(s) 1521
MluCI AATT 6 cut(s) 87, 258, 275, 470, 591, 1240
MluNI TGGCCA 1 cut(s) 1521
Mly113I GGCGCC 1 cut(s) 1738
MlyI GAGTC 2 cut(s) 131, 1756
MmeI TCCRAC 1 cut(s) 1596
MnlI CCTC 5 cut(s) 992, 1102, 1176, 1431, 1771
Mox20I TGGCCA 1 cut(s) 1521
Mph1103I ATGCAT 1 cut(s) 863
MroNI GCCGGC 1 cut(s) 1375
MroXI GAANNNNTTC 2 cut(s) 87, 525
MscI TGGCCA 1 cut(s) 1521
MseI TTAA 4 cut(s) 17, 278, 731, 792
MslI CAYNNNNRTG 1 cut(s) 114
Msp20I TGGCCA 1 cut(s) 1521
MspI CCGG 3 cut(s) 271, 1261, 1376
MspR9I CCNGG 4 cut(s) 174, 272, 1261, 1262
MvaI CCWGG 1 cut(s) 174
MwoI GCNNNNNNNGC 9 cut(s) 125, 770, 785, 1180, 1189, 1485, 1634, 1718, 1727
NaeI GCCGGC 1 cut(s) 1377
NarI GGCGCC 1 cut(s) 1738
NciI CCSGG 3 cut(s) 272, 1261, 1262
NdeII GATC 3 cut(s) 337, 927, 1363
NgoMIV GCCGGC 1 cut(s) 1375
NlaIV GGNNCC 4 cut(s) 171, 339, 528, 1739
NmeAIII GCCGAG 1 cut(s) 119
NmuCI GTSAC 2 cut(s) 487, 1508
NsiI ATGCAT 1 cut(s) 863
NspI RCATGY 1 cut(s) 865
NspV TTCGAA 1 cut(s) 715
PaeI GCATGC 1 cut(s) 865
PaeR7I CTCGAG 1 cut(s) 646
PagI TCATGA 1 cut(s) 918
PdiI GCCGGC 1 cut(s) 1377
PdmI GAANNNNTTC 2 cut(s) 87, 525
PfeI GAWTC 3 cut(s) 717, 890, 905
PkrI GCNGC 4 cut(s) 787, 1714, 1732, 1742
PleI GAGTC 2 cut(s) 131, 1756
PluTI GGCGCC 1 cut(s) 1741
PpsI GAGTC 2 cut(s) 131, 1756
Ppu21I YACGTR 1 cut(s) 700
PshBI ATTAAT 1 cut(s) 278
Psp1406I AACGTT 1 cut(s) 401
Psp6I CCWGG 1 cut(s) 172
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 4 cut(s) 171, 339, 528, 1739
PspPI GGNCC 3 cut(s) 170, 1301, 1690
PsuI RGATCY 2 cut(s) 337, 927
RsaI GTAC 3 cut(s) 569, 677, 994
RsaNI GTAC 3 cut(s) 568, 676, 993
RseI CAYNNNNRTG 1 cut(s) 114
SaqAI TTAA 4 cut(s) 17, 278, 731, 792
SatI GCNGC 4 cut(s) 786, 1713, 1731, 1741
Sau3AI GATC 3 cut(s) 337, 927, 1363
Sau96I GGNCC 3 cut(s) 170, 1301, 1690
SchI GAGTC 2 cut(s) 131, 1756
ScrFI CCNGG 4 cut(s) 174, 272, 1261, 1262
SduI GDGCHC 3 cut(s) 886, 1395, 1545
SfaNI GCATC 4 cut(s) 137, 291, 765, 1342
SfcI CTRYAG 4 cut(s) 157, 234, 411, 1806
SfoI GGCGCC 1 cut(s) 1739
Sfr274I CTCGAG 1 cut(s) 646
SfuI TTCGAA 1 cut(s) 715
SinI GGWCC 2 cut(s) 1301, 1690
SlaI CTCGAG 1 cut(s) 646
SmaI CCCGGG 1 cut(s) 1262
SmiMI CAYNNNNRTG 1 cut(s) 114
SmlI CTYRAG 4 cut(s) 241, 646, 1175, 1544
SmoI CTYRAG 4 cut(s) 241, 646, 1175, 1544
SphI GCATGC 1 cut(s) 865
Sse9I AATT 6 cut(s) 87, 258, 275, 470, 591, 1240
SsiI CCGC 2 cut(s) 268, 1741
SspDI GGCGCC 1 cut(s) 1737
SspMI CTAG 3 cut(s) 417, 480, 971
StyD4I CCNGG 4 cut(s) 172, 270, 1259, 1260
StyI CCWWGG 3 cut(s) 385, 970, 1706
TaaI ACNGT 4 cut(s) 669, 877, 1050, 1597
TaiI ACGT 2 cut(s) 404, 702
TaqI TCGA 8 cut(s) 147, 509, 579, 647, 715, 903, 1091, 1425
TasI AATT 6 cut(s) 87, 258, 275, 470, 591, 1240
TatI WGTACW 2 cut(s) 567, 675
TauI GCSGC 1 cut(s) 1743
TfiI GAWTC 3 cut(s) 717, 890, 905
Tru1I TTAA 4 cut(s) 17, 278, 731, 792
Tru9I TTAA 4 cut(s) 17, 278, 731, 792
TscAI CASTG 5 cut(s) 138, 339, 880, 1789, 1801
TseFI GTSAC 2 cut(s) 487, 1508
TseI GCWGC 3 cut(s) 785, 1712, 1730
Tsp45I GTSAC 2 cut(s) 487, 1508
TspDTI ATGAA 7 cut(s) 224, 237, 562, 670, 907, 1390, 1429
TspMI CCCGGG 1 cut(s) 1260
TspRI CASTG 5 cut(s) 138, 339, 880, 1789, 1801
VpaK11BI GGWCC 2 cut(s) 1301, 1690
VspI ATTAAT 1 cut(s) 278
XapI RAATTY 2 cut(s) 258, 1240
XceI RCATGY 1 cut(s) 865
XhoI CTCGAG 1 cut(s) 646
XmaI CCCGGG 1 cut(s) 1260
XmaJI CCTAGG 1 cut(s) 970
XmiI GTMKAC 1 cut(s) 1011
XmnI GAANNNNTTC 2 cut(s) 87, 525
XspI CTAG 3 cut(s) 417, 480, 971
Zsp2I ATGCAT 1 cut(s) 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.