Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000755

Physical Location & Seq

Genomic Coordinates Reverse (-)

64374003 .. 64377301

Gene Structure 3299 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00330670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGAGTATTGGGAATGTATTGAACTTTTACTATGCAGTTTTGTTTTCCAAGAGGAAATTATTTGGGCCACAAGAGTTTCGTTTGTGGAGTCATATATTTCTGGTTTTGTGTGTAGTGGCACTCTCACTGGATCCTTTGTTCAGTTATATACTTGTGCTTAACGAGGATCACAATTGCGTTAGATTGGACAGAGAATTGGGGACCATAGCCATTGTTTTCCGTTCCATCATTGATTTCTTCTATATTCTTCATATCATTTTTCAGTTCCGTTCCCGTATTGCTTGCCTTTCTTCTAAAGTTCCAGAGATTCGGGTAGAGATTCGCGCAAGTCCATGGAGATATTTCTTGTTCTACTTCCTAGTTGACATACTTGTAATTCTCCCACTACCACAGGTTGTTGGAGCCTTTTGGTACTTGTTCTCTATAGAGAGGAAAACAACTTGCTGGAGAGAAGCCTGTAAACATCATGATGTTGCCTACTGTTCTTTATATTGTGATGACAACTTTGGAACTGGAATGTTTTTGGATGACTCTTGCTCTACAGACTCCAAACTTTTCCATTATGGAATATTCATTGATGCCCTTGAATCCGGTATTGTGGATTCAGTGGATTTTGTACAAAAGATTTCTTACTGCTTTTGGTGGGGACTGCAAAATCTCAGTCTTTTGTTGTGGAAACAGACATATTTACAGTTGAAAACTGCGCGATTGGCAGAAATGAGATTGAAGGAGCAAGAGAGAGAATATTGTATGGCCTTCTACACACTTCCTCATGATCTCAAGAAGCGTATCAAAAAGGAGCAGTGGCGAGAAGATATAGGACTTAACATGGAGAAATTTTTTCTCAGTCTTCCCAAGGACCTTAGGAGAGATACAAAGCGCTATATATGCTTGGGTGCACTCCGGCGAGTGCCATTGTTTGATACATTGGATGAGCAACAGTTGGAAGCGATGTGTGATATTCTCAAGCCAGTAATCTACACAAAGGGAAGCTTCCTTATTCGGGAGGGCGACCACGTGGATGGAATGCTTTTCATAATGCAAGGAATGGTGTTTAGTAAAGAGAGACTTGGTTTCTTCTCCATATGTCTCAAGGCCGGTGACTTTTGTGGTGAAGAGATCATAGCAACTCTTGATCCATCGTCACCCCTTCATCTTCCCATCTCAACCAGAACGGTCCAAGCCATTACTTTAGTGGAATCCTTCGTTTTAAAAGCCGACGACTTTAGGTCTTTAGTCTCCCAGCGGTCTCAGTTGAAGCACAACTTTAGGTTCTACACACAAACTTGGAGGATTTGGGCAGCTTGTTATATACAAGATGCTTGGCGACGCTACAGCAGGAAGAAGCTTGAAGAGTCTCTTCGGAAAGAGGAGAATGTGTTGCAAGATGCACTAGCCAAGGCTGGTGGTAGCTCGAGCTCCCAGAGCCTAGGTTCGGCCATTTATTCCTTGCGTTTCGCTGCTAATGCACTCAGTGCTATACGGCATAATGCTAGGCCTAGGCTACTTCAAAAGCCATCAGAGCCTGATATTTCCATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

514

Amino Acids

59.97

Weight (kDa)

8.59

Isoelectric Point (pI)

53.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	326 - 415	2e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000755)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g31201 FvH4_7g31201 FvH4_7g31201 FvH4_7g31300 FvH4_7g31330
malus_domestica	MD01G1216700.v1.1 MD01G1216900.v1.1 MD01G1217000.v1.1 MD01G1217200.v1.1 MD01G1217400.v1.1 MD13G1117500.v1.1
prunus_persica	Prupe.2G308800_v2.0.a1
pyrus_communis	pycom01g22730 pycom01g22740 pycom01g22760
rosa_chinensis	RchiOBHm_Chr1g0380271 RchiOBHm_Chr1g0380281 RchiOBHm_Chr1g0380291 RchiOBHm_Chr1g0380351 RchiOBHm_Chr5g0056501 RchiOBHm_Chr5g0056511
rosa_laevigata	RLG00000013722 RLG00000026309 RLG00000026310 RLG00000026311 RLG00000026313
rosa_multiflora	Rmu_sc0000256.1_g000001 Rmu_sc0002387.1_g000005 Rmu_sc0002387.1_g000010 Rmu_sc0002387.1_g000012 Rmu_sc0003249.1_g000002 Rmu_sc0003249.1_g000003 Rmu_sc0003249.1_g000007 Rmu_sc0003249.1_g000008 Rmu_sc0003249.1_g000019 Rmu_sc0003249.1_g000030 Rmu_sc0005335.1_g000002 Rmu_sc0005335.1_g000010
rosa_roxburghii	Rroxscaffold_1G00023820 Rroxscaffold_2G00077310 Rroxscaffold_4G00279460 Rroxscaffold_4G00279470 Rroxscaffold_4G00279480 Rroxscaffold_4G00279500 Rroxscaffold_4G00279520 Rroxscaffold_4G00285960 Rroxscaffold_4G00330670
rosa_rugosa	Rorug01G0419800 Rorug01G0419900 Rorug01G0420000 Rorug01G0420000 Rorug01G0420100 Rorug05G0300400 Rorug05G0300500
rosa_samantha	Rh1AG444400 Rh1AG444600 Rh1AG444700 Rh1CG413000 Rh1CG413100 Rh1CG413300 Rh1CG413400 Rh1CG413500 Rh1CG413800 Rh1CG414000 Rh1CG414300 Rh2AG468600
rosa_wichuraiana	Rw1G001780 Rw1G038590 Rw1G038670 Rw1G038690 Rw5G015040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	324, 706
AciI	CCGC	1 cut(s)	1246
AclWI	GGATC	4 cut(s)	125, 138, 174, 1130
AcoI	YGGCCR	1 cut(s)	1437
AcsI	RAATTY	1 cut(s)	836
AcvI	CACGTG	1 cut(s)	1018
AdeI	CACNNNGTG	1 cut(s)	1475
AfaI	GTAC	2 cut(s)	413, 618
AfeI	AGCGCT	1 cut(s)	881
AfiI	CCNNNNNNNGG	2 cut(s)	1003, 1435
AgsI	TTSAA	8 cut(s)	22, 587, 697, 727, 1258, 1352, 1511, 1541
AhdI	GACNNNNNGTC	1 cut(s)	1228
AloI	GAACNNNNNNTCC	2 cut(s)	122, 154
AluBI	AGCT	5 cut(s)	993, 1304, 1348, 1413, 1419
AluI	AGCT	5 cut(s)	993, 1304, 1348, 1413, 1419
Alw21I	GWGCWC	2 cut(s)	901, 1421
Alw26I	GTCTC	5 cut(s)	1060, 1094, 1243, 1254, 1362
Alw44I	GTGCAC	1 cut(s)	897
AlwI	GGATC	4 cut(s)	125, 138, 174, 1130
AlwNI	CAGNNNCTG	1 cut(s)	1526
Ama87I	CYCGRG	1 cut(s)	1414
Aor51HI	AGCGCT	1 cut(s)	881
AoxI	GGCC	5 cut(s)	65, 753, 1095, 1437, 1496
ApaLI	GTGCAC	1 cut(s)	897
ApeKI	GCWGC	2 cut(s)	1301, 1460
ApoI	RAATTY	1 cut(s)	836
ArsI	GACNNNNNNTTYG	2 cut(s)	646, 678
AspA2I	CCTAGG	2 cut(s)	1429, 1499
AspLEI	GCGC	3 cut(s)	326, 706, 882
AspS9I	GGNCC	4 cut(s)	65, 201, 859, 1177
AsuHPI	GGTGA	3 cut(s)	1112, 1124, 1137
AvaI	CYCGRG	1 cut(s)	1414
AvaII	GGWCC	3 cut(s)	201, 859, 1177
AvrII	CCTAGG	2 cut(s)	1429, 1499
AxyI	CCTNAGG	1 cut(s)	863
BaeGI	GKGCMC	1 cut(s)	901
BamHI	GGATCC	1 cut(s)	130
BanII	GRGCYC	1 cut(s)	1421
BbrPI	CACGTG	1 cut(s)	1018
BbsI	GAAGAC	1 cut(s)	842
Bbv12I	GWGCWC	2 cut(s)	901, 1421
BbvI	GCAGC	2 cut(s)	1313, 1447
BccI	CCATC	5 cut(s)	233, 1016, 1147, 1169, 1525
BceAI	ACGGC	1 cut(s)	1499
BcoDI	GTCTC	5 cut(s)	1060, 1094, 1243, 1254, 1362
BfaI	CTAG	5 cut(s)	359, 1394, 1430, 1494, 1500
BfmI	CTRYAG	3 cut(s)	423, 540, 1333
BfoI	RGCGCY	1 cut(s)	883
BisI	GCNGC	2 cut(s)	1302, 1461
BlnI	CCTAGG	2 cut(s)	1429, 1499
BlsI	GCNGC	2 cut(s)	1303, 1462
Bme18I	GGWCC	3 cut(s)	201, 859, 1177
BmeRI	GACNNNNNGTC	1 cut(s)	1228
BmeT110I	CYCGRG	1 cut(s)	1414
BmgT120I	GGNCC	4 cut(s)	65, 201, 859, 1177
BmiI	GGNNCC	3 cut(s)	132, 202, 403
BmsI	GCATC	3 cut(s)	568, 1309, 1378
BpiI	GAAGAC	1 cut(s)	842
BpmI	CTGGAG	1 cut(s)	466
BpuEI	CTTGAG	3 cut(s)	764, 950, 1076
BsaAI	YACGTR	1 cut(s)	1018
BsaI	GGTCTC	1 cut(s)	1254
BsaJI	CCNNGG	5 cut(s)	332, 855, 1398, 1429, 1499
BsaWI	WCCGGW	1 cut(s)	590
BsaXI	ACNNNNNCTCC	2 cut(s)	1364, 1394
Bsc4I	CCNNNNNNNGG	2 cut(s)	1003, 1435
Bse118I	RCCGGY	1 cut(s)	1097
Bse1I	ACTGG	3 cut(s)	132, 517, 971
Bse21I	CCTNAGG	1 cut(s)	863
BseDI	CCNNGG	5 cut(s)	332, 855, 1398, 1429, 1499
BseGI	GGATG	3 cut(s)	532, 937, 1027
BseLI	CCNNNNNNNGG	2 cut(s)	1003, 1435
BseMII	CTCAG	4 cut(s)	673, 859, 1265, 1486
BseNI	ACTGG	3 cut(s)	132, 517, 971
BseRI	GAGGAG	1 cut(s)	1385
BseSI	GKGCMC	1 cut(s)	901
BseXI	GCAGC	2 cut(s)	1313, 1447
BseYI	CCCAGC	1 cut(s)	1242
Bsh1236I	CGCG	2 cut(s)	324, 706
BshFI	GGCC	5 cut(s)	67, 755, 1097, 1439, 1498
BsiHKAI	GWGCWC	2 cut(s)	901, 1421
BsiHKCI	CYCGRG	1 cut(s)	1414
BsiSI	CCGG	3 cut(s)	591, 904, 1098
BslFI	GGGAC	2 cut(s)	214, 660
BslI	CCNNNNNNNGG	2 cut(s)	1003, 1435
BsmAI	GTCTC	5 cut(s)	1060, 1094, 1243, 1254, 1362
BsmFI	GGGAC	2 cut(s)	214, 660
BsmI	GAATGC	1 cut(s)	1032
BsnI	GGCC	5 cut(s)	67, 755, 1097, 1439, 1498
Bso31I	GGTCTC	1 cut(s)	1254
BsoBI	CYCGRG	1 cut(s)	1414
Bsp1286I	GDGCHC	2 cut(s)	901, 1421
Bsp1407I	TGTACA	1 cut(s)	616
Bsp143I	GATC	5 cut(s)	130, 166, 775, 1119, 1135
Bsp19I	CCATGG	1 cut(s)	332
BspACI	CCGC	1 cut(s)	1246
BspANI	GGCC	5 cut(s)	67, 755, 1097, 1439, 1498
BspCNI	CTCAG	4 cut(s)	672, 858, 1264, 1485
BspFNI	CGCG	2 cut(s)	324, 706
BspHI	TCATGA	2 cut(s)	466, 772
BspLI	GGNNCC	3 cut(s)	132, 202, 403
BspPI	GGATC	4 cut(s)	125, 138, 174, 1130
BspTNI	GGTCTC	1 cut(s)	1254
BsrFI	RCCGGY	1 cut(s)	1097
BsrGI	TGTACA	1 cut(s)	616
BsrI	ACTGG	3 cut(s)	132, 517, 971
BssAI	RCCGGY	1 cut(s)	1097
BssECI	CCNNGG	5 cut(s)	332, 855, 1398, 1429, 1499
BssMI	GATC	5 cut(s)	130, 166, 775, 1119, 1135
BssT1I	CCWWGG	5 cut(s)	332, 855, 1398, 1429, 1499
Bst4CI	ACNGT	4 cut(s)	482, 693, 942, 1177
Bst6I	CTCTTC	3 cut(s)	1110, 1347, 1365
BstAPI	GCANNNNNTGC	1 cut(s)	1475
BstAUI	TGTACA	1 cut(s)	616
BstBAI	YACGTR	1 cut(s)	1018
BstC8I	GCNNGC	1 cut(s)	283
BstDEI	CTNAG	5 cut(s)	659, 845, 863, 1251, 1472
BstDSI	CCRYGG	1 cut(s)	332
BstF5I	GGATG	3 cut(s)	532, 937, 1027
BstFNI	CGCG	2 cut(s)	324, 706
BstH2I	RGCGCY	1 cut(s)	883
BstHHI	GCGC	3 cut(s)	326, 706, 882
BstKTI	GATC	5 cut(s)	133, 169, 778, 1122, 1138
BstMAI	GTCTC	5 cut(s)	1060, 1094, 1243, 1254, 1362
BstMBI	GATC	5 cut(s)	130, 166, 775, 1119, 1135
BstMWI	GCNNNNNNNGC	6 cut(s)	710, 888, 1425, 1466, 1475, 1522
BstSFI	CTRYAG	3 cut(s)	423, 540, 1333
BstSLI	GKGCMC	1 cut(s)	901
BstUI	CGCG	2 cut(s)	324, 706
BstV1I	GCAGC	2 cut(s)	1313, 1447
BstV2I	GAAGAC	1 cut(s)	842
BstX2I	RGATCY	1 cut(s)	130
BstXI	CCANNNNNNTGG	1 cut(s)	1022
BstYI	RGATCY	1 cut(s)	130
Bsu36I	CCTNAGG	1 cut(s)	863
BsuRI	GGCC	5 cut(s)	67, 755, 1097, 1439, 1498
BtgI	CCRYGG	1 cut(s)	332
BtgZI	GCGATG	1 cut(s)	965
BtsCI	GGATG	3 cut(s)	532, 937, 1027
BtsI	GCAGTG	1 cut(s)	809
BtsIMutI	CAGTG	4 cut(s)	125, 612, 809, 1480
Cac8I	GCNNGC	1 cut(s)	283
CaiI	CAGNNNCTG	1 cut(s)	1526
CciI	TCATGA	2 cut(s)	466, 772
CfoI	GCGC	3 cut(s)	326, 706, 882
Cfr10I	RCCGGY	1 cut(s)	1097
Cfr13I	GGNCC	4 cut(s)	65, 201, 859, 1177
CseI	GACGC	1 cut(s)	1338
Csp6I	GTAC	2 cut(s)	412, 617
CspCI	CAANNNNNGTGG	2 cut(s)	1387, 1422
CviAII	CATG	4 cut(s)	333, 467, 773, 829
CviQI	GTAC	2 cut(s)	412, 617
DdeI	CTNAG	5 cut(s)	659, 845, 863, 1251, 1472
DpnI	GATC	5 cut(s)	132, 168, 777, 1121, 1137
DpnII	GATC	5 cut(s)	130, 166, 775, 1119, 1135
DraI	TTTAAA	1 cut(s)	1212
DraIII	CACNNNGTG	1 cut(s)	1475
DriI	GACNNNNNGTC	1 cut(s)	1228
EaeI	YGGCCR	1 cut(s)	1437
Eam1104I	CTCTTC	3 cut(s)	1110, 1347, 1365
Eam1105I	GACNNNNNGTC	1 cut(s)	1228
EarI	CTCTTC	3 cut(s)	1110, 1347, 1365
Ecl136II	GAGCTC	1 cut(s)	1419
Eco130I	CCWWGG	5 cut(s)	332, 855, 1398, 1429, 1499
Eco147I	AGGCCT	1 cut(s)	1498
Eco24I	GRGCYC	1 cut(s)	1421
Eco31I	GGTCTC	1 cut(s)	1254
Eco47I	GGWCC	3 cut(s)	201, 859, 1177
Eco47III	AGCGCT	1 cut(s)	881
Eco53kI	GAGCTC	1 cut(s)	1419
Eco72I	CACGTG	1 cut(s)	1018
Eco81I	CCTNAGG	1 cut(s)	863
Eco88I	CYCGRG	1 cut(s)	1414
EcoICRI	GAGCTC	1 cut(s)	1419
EcoO109I	RGGNCCY	1 cut(s)	859
EcoT14I	CCWWGG	5 cut(s)	332, 855, 1398, 1429, 1499
EcoT38I	GRGCYC	1 cut(s)	1421
ErhI	CCWWGG	5 cut(s)	332, 855, 1398, 1429, 1499
FaeI	CATG	4 cut(s)	336, 470, 776, 832
FalI	AAGNNNNNCTT	8 cut(s)	977, 1009, 1053, 1085, 1250, 1282, 1344, 1376
FaqI	GGGAC	2 cut(s)	214, 660
FatI	CATG	4 cut(s)	332, 466, 772, 828
FauNDI	CATATG	1 cut(s)	1085
Fnu4HI	GCNGC	2 cut(s)	1302, 1461
FokI	GGATG	3 cut(s)	539, 944, 1034
FriOI	GRGCYC	1 cut(s)	1421
Fsp4HI	GCNGC	2 cut(s)	1302, 1461
FspBI	CTAG	5 cut(s)	359, 1394, 1430, 1494, 1500
GlaI	GCGC	3 cut(s)	325, 705, 881
GluI	GCNGC	2 cut(s)	1302, 1461
GsaI	CCCAGC	1 cut(s)	1246
GsuI	CTGGAG	1 cut(s)	466
HaeII	RGCGCY	1 cut(s)	883
HaeIII	GGCC	5 cut(s)	67, 755, 1097, 1439, 1498
HapII	CCGG	3 cut(s)	591, 904, 1098
HgaI	GACGC	1 cut(s)	1338
HhaI	GCGC	3 cut(s)	326, 706, 882
Hin1II	CATG	4 cut(s)	336, 470, 776, 832
Hin6I	GCGC	3 cut(s)	324, 704, 880
HinP1I	GCGC	3 cut(s)	324, 704, 880
HincII	GTYRAC	1 cut(s)	364
HindII	GTYRAC	1 cut(s)	364
HindIII	AAGCTT	2 cut(s)	991, 1346
HinfI	GANTC	9 cut(s)	88, 307, 319, 530, 545, 587, 602, 1199, 1355
HpaII	CCGG	3 cut(s)	591, 904, 1098
HphI	GGTGA	3 cut(s)	1112, 1124, 1137
Hpy166II	GTNNAC	3 cut(s)	364, 461, 899
Hpy188I	TCNGA	2 cut(s)	1365, 1522
Hpy188III	TCNNGA	6 cut(s)	302, 467, 773, 781, 1004, 1133
Hpy8I	GTNNAC	3 cut(s)	364, 461, 899
Hpy99I	CGWCG	2 cut(s)	1223, 1332
HpyAV	CCTTC	4 cut(s)	721, 766, 1160, 1213
HpyCH4III	ACNGT	4 cut(s)	482, 693, 942, 1177
HpyCH4IV	ACGT	1 cut(s)	1017
HpyCH4V	TGCA	7 cut(s)	35, 652, 899, 1042, 1384, 1391, 1469
HpyF10VI	GCNNNNNNNGC	6 cut(s)	710, 888, 1425, 1466, 1475, 1522
HpyF3I	CTNAG	5 cut(s)	659, 845, 863, 1251, 1472
HpySE526I	ACGT	1 cut(s)	1017
Hsp92II	CATG	4 cut(s)	336, 470, 776, 832
HspAI	GCGC	3 cut(s)	324, 704, 880
Kzo9I	GATC	5 cut(s)	130, 166, 775, 1119, 1135
LmnI	GCTCC	4 cut(s)	401, 730, 799, 1424
Lsp1109I	GCAGC	2 cut(s)	1313, 1447
LweI	GCATC	3 cut(s)	568, 1309, 1378
MaeI	CTAG	5 cut(s)	359, 1394, 1430, 1494, 1500
MaeII	ACGT	1 cut(s)	1017
MaeIII	GTNAC	2 cut(s)	1100, 1143
MalI	GATC	5 cut(s)	132, 168, 777, 1121, 1137
MboI	GATC	5 cut(s)	130, 166, 775, 1119, 1135
MfeI	CAATTG	1 cut(s)	172
MflI	RGATCY	1 cut(s)	130
MhlI	GDGCHC	2 cut(s)	901, 1421
MluCI	AATT	5 cut(s)	56, 172, 194, 375, 836
MlyI	GAGTC	4 cut(s)	97, 524, 539, 1364
MmeI	TCCRAC	2 cut(s)	379, 924
MnlI	CCTC	7 cut(s)	45, 157, 423, 780, 1000, 1284, 1363
MseI	TTAA	3 cut(s)	159, 825, 1211
MslI	CAYNNNNRTG	2 cut(s)	468, 1020
MspA1I	CMGCKG	1 cut(s)	1246
MspI	CCGG	3 cut(s)	591, 904, 1098
MunI	CAATTG	1 cut(s)	172
Mva1269I	GAATGC	1 cut(s)	1032
MvnI	CGCG	2 cut(s)	324, 706
MwoI	GCNNNNNNNGC	6 cut(s)	710, 888, 1425, 1466, 1475, 1522
NcoI	CCATGG	1 cut(s)	332
NdeI	CATATG	1 cut(s)	1085
NdeII	GATC	5 cut(s)	130, 166, 775, 1119, 1135
NlaIII	CATG	4 cut(s)	336, 470, 776, 832
NlaIV	GGNNCC	3 cut(s)	132, 202, 403
NmuCI	GTSAC	2 cut(s)	1100, 1143
PaeR7I	CTCGAG	1 cut(s)	1414
PagI	TCATGA	2 cut(s)	466, 772
PceI	AGGCCT	1 cut(s)	1498
PctI	GAATGC	1 cut(s)	1032
PfeI	GAWTC	5 cut(s)	307, 319, 587, 602, 1199
PkrI	GCNGC	2 cut(s)	1303, 1462
PleI	GAGTC	4 cut(s)	96, 524, 539, 1363
PmaCI	CACGTG	1 cut(s)	1018
PmlI	CACGTG	1 cut(s)	1018
PpsI	GAGTC	4 cut(s)	96, 524, 539, 1363
Ppu21I	YACGTR	1 cut(s)	1018
PpuMI	RGGWCCY	1 cut(s)	859
Psp124BI	GAGCTC	1 cut(s)	1421
Psp5II	RGGWCCY	1 cut(s)	859
PspCI	CACGTG	1 cut(s)	1018
PspFI	CCCAGC	1 cut(s)	1242
PspN4I	GGNNCC	3 cut(s)	132, 202, 403
PspPI	GGNCC	4 cut(s)	65, 201, 859, 1177
PspPPI	RGGWCCY	1 cut(s)	859
PspXI	VCTCGAGB	1 cut(s)	1414
PstNI	CAGNNNCTG	1 cut(s)	1526
PsuI	RGATCY	1 cut(s)	130
RsaI	GTAC	2 cut(s)	413, 618
RsaNI	GTAC	2 cut(s)	412, 617
RseI	CAYNNNNRTG	2 cut(s)	468, 1020
SacI	GAGCTC	1 cut(s)	1421
SaqAI	TTAA	3 cut(s)	159, 825, 1211
SatI	GCNGC	2 cut(s)	1302, 1461
Sau3AI	GATC	5 cut(s)	130, 166, 775, 1119, 1135
Sau96I	GGNCC	4 cut(s)	65, 201, 859, 1177
SchI	GAGTC	4 cut(s)	97, 524, 539, 1364
SduI	GDGCHC	2 cut(s)	901, 1421
SfaNI	GCATC	3 cut(s)	568, 1309, 1378
SfcI	CTRYAG	3 cut(s)	423, 540, 1333
Sfr274I	CTCGAG	1 cut(s)	1414
SinI	GGWCC	3 cut(s)	201, 859, 1177
SlaI	CTCGAG	1 cut(s)	1414
SmiMI	CAYNNNNRTG	2 cut(s)	468, 1020
SmlI	CTYRAG	4 cut(s)	779, 965, 1091, 1414
SmoI	CTYRAG	4 cut(s)	779, 965, 1091, 1414
Sse9I	AATT	5 cut(s)	56, 172, 194, 375, 836
SseBI	AGGCCT	1 cut(s)	1498
SsiI	CCGC	1 cut(s)	1246
SspI	AATATT	2 cut(s)	570, 746
SspMI	CTAG	5 cut(s)	359, 1394, 1430, 1494, 1500
SstI	GAGCTC	1 cut(s)	1421
StuI	AGGCCT	1 cut(s)	1498
StyI	CCWWGG	5 cut(s)	332, 855, 1398, 1429, 1499
TaaI	ACNGT	4 cut(s)	482, 693, 942, 1177
TaiI	ACGT	1 cut(s)	1020
TaqI	TCGA	1 cut(s)	1415
TasI	AATT	5 cut(s)	56, 172, 194, 375, 836
TatI	WGTACW	1 cut(s)	616
TfiI	GAWTC	5 cut(s)	307, 319, 587, 602, 1199
Tru1I	TTAA	3 cut(s)	159, 825, 1211
Tru9I	TTAA	3 cut(s)	159, 825, 1211
TscAI	CASTG	4 cut(s)	132, 612, 809, 1480
TseFI	GTSAC	2 cut(s)	1100, 1143
TseI	GCWGC	2 cut(s)	1301, 1460
Tsp45I	GTSAC	2 cut(s)	1100, 1143
TspDTI	ATGAA	4 cut(s)	239, 562, 1024, 1142
TspGWI	ACGGA	2 cut(s)	209, 257
TspRI	CASTG	4 cut(s)	132, 612, 809, 1480
VneI	GTGCAC	1 cut(s)	897
VpaK11BI	GGWCC	3 cut(s)	201, 859, 1177
XapI	RAATTY	1 cut(s)	836
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1192
XhoI	CTCGAG	1 cut(s)	1414
XmaJI	CCTAGG	2 cut(s)	1429, 1499
XspI	CTAG	5 cut(s)	359, 1394, 1430, 1494, 1500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.