RchiOBHm_Chr5g0056511

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000755
Physical Location & Seq
Forward (+)
60152722 .. 60157019
4298 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33341

Sequence Viewer

Length: 1734 bp
ATGGAGGTTCAAATTTCACGGATACAGAGTGGTGATTTAGAAGAAAATGCTCCCGGAAGTGTATCTTCAGGGGAATCTTTGACGGCAGGGTACTTCAATAGAGTTTTGGGACCTAGATCTTTTGAAAGGGTAATGAGTACCAAAGGAGTAAAATCTCATTGTGGAGTATTGGTTGACAAGCTAAAGCTAATCAGGAAGAATAGAATACTTTTTTGGTCTCTTAGCGCGCTCTTACTGGATCCGCTTTTCTGTTATATCCTTGTCATGAGTGATGAGAAGAAGTGCATTAGATTGGACAGAATATTGGGGATTATAGCTACTGTTTTGCGATCCCTCAGTGACCTCTACTACATATTTCATATCATCAATCATTTCGATGCTACATTTGTTACTCGTTCAGTTGCAGTGGACATACTTGTAGTTCTTCCACTTCCGCAGGTGCTAGTTTTTGCTGTAGTTCCCAATCTAAATGACTCCAGAATCTACAGTGCTGCAAAGTCCTTGAACTTTTTATTTATAATTCAGTATGTGCTGAGGGTTCTTCGAACCTGCTCCTTGTTAACACTCATTATAAGGGCTTCTGGCATCCTTGCTGAATCTGCATGGGCTAATCTCTCTTTCTTTATGCTGGCGAGTCATGTCCTTGGAGCCTTTTGGTATTTGTTTTCTATAGAAAGGAAAGCAACTTGCTGGCTGGAAGCATGTAAACGTCTCGGTGTTAATTGTTCTTTGTACTGTGATGACACCTTAAGATCTATCACACTTCTGAATGATTCTTGCTCTACAAATTCTACACTTTTTGATTTTGGAATATACTCTGATGCCGTTGAATCTGGAGTTGTTGATTCAACTCATTTTTTACAAAGGATTTCTTACGGCTTTTGGTGGGGACTGCAAAATCTCAGTTCTCTTGGTCAAAGCCTCAAAACAAGTATCCATATCTGGGAAATTTGTTTTGCAGTTTCTGTTTCAATATGTGGGTTGGTACTATTTGCATTTCTTATTGGTAACATGCAGACATATTTGCTAGCAAAAGTTGCAAGATCAGAGGATATGAGAGCCAAGCAACAAGAAATAGCAGTGTGGATGTCTTTCCATTCACTTCCGCGGAATCTTAAAACTCGAATTTGGCAGTCCCTGAAATACAAGCTCAAGGAAAACACGGGAATTGATGTGGAAACTTTTCTTCACCTTCTTCCTCGTGAACTCAGTAAGGATATAAAGCGACATATTTGCTATAATCCACTCAGAGAAGTGTCTTTACTTCGAAATAAGAATGAGGAACTGTTGGACGCAATCTGTGAACATCTGAAGCCAGTGCTTTACAAAAAGAATAGCATCATCTTTCAAGAGGGAGAGCCACTGGCTGAGATGCTGTTTATCACCCGTGGCAAGATAGTGACTTACACCACCTCGGCCATGGTAAGATTTCTTGGAAATGGTGACTGCTATGGTGAAGAACTTCTCGATTGGATGCTGTGTTCTTACAGTGAAGAGAATTTGAGTTCTACCAACATATACAACTTTCCCTTGTCAAGCAAAACTGTCAAAGCTCAAACTGAAGTTGAAGTCTTTGTTCTAAGGGTCCATCAGTTAAAGCTTATAGTGAAGAAATTCTGGTTCTGTTTTAGTAAGGGGACAAGGCCACTGTCACTGTCTTGGGCTGCACGTACTTTGCAAGCAGCATGGCGCCGCCACAGAAGGAGCCAACTGTTGAAGGATGTTGTATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

577

Amino Acids

65.92

Weight (kDa)

9.08

Isoelectric Point (pI)

40.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
cNMP_binding PF00027 441 - 504 2.8e-06 Cyclic nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 518, 572
AarI CACCTGC 1 cut(s) 427
Acc36I ACCTGC 2 cut(s) 427, 557
AccB1I GGYRCC 1 cut(s) 1689
AccII CGCG 2 cut(s) 227, 1108
AciI CCGC 5 cut(s) 242, 434, 1106, 1108, 1693
AclWI GGATC 3 cut(s) 233, 246, 324
AcoI YGGCCR 1 cut(s) 1416
AcsI RAATTY 6 cut(s) 12, 787, 948, 1125, 1498, 1613
AcuI CTGAAG 3 cut(s) 51, 1331, 1581
AcyI GRCGYC 1 cut(s) 1690
AfaI GTAC 5 cut(s) 92, 139, 734, 987, 1672
AfiI CCNNNNNNNGG 1 cut(s) 943
AflII CTTAAG 1 cut(s) 748
AjuI GAANNNNNNNTTGG 2 cut(s) 196, 228
AloI GAACNNNNNNTCC 2 cut(s) 1465, 1497
AluBI AGCT 6 cut(s) 181, 187, 317, 1150, 1553, 1600
AluI AGCT 6 cut(s) 181, 187, 317, 1150, 1553, 1600
Alw26I GTCTC 2 cut(s) 222, 716
AlwI GGATC 3 cut(s) 233, 246, 324
AlwNI CAGNNNCTG 2 cut(s) 965, 1138
AoxI GGCC 2 cut(s) 1416, 1643
ApeKI GCWGC 3 cut(s) 491, 1664, 1682
ApoI RAATTY 6 cut(s) 12, 787, 948, 1125, 1498, 1613
Asp700I GAANNNNTTC 3 cut(s) 1182, 1461, 1613
AspLEI GCGC 3 cut(s) 227, 229, 1692
AspS9I GGNCC 2 cut(s) 110, 1585
AsuC2I CCSGG 1 cut(s) 54
AsuHPI GGTGA 5 cut(s) 44, 1181, 1375, 1454, 1466
AsuII TTCGAA 2 cut(s) 544, 1267
AsuNHI GCTAGC 1 cut(s) 1027
AvaII GGWCC 2 cut(s) 110, 1585
BamHI GGATCC 1 cut(s) 238
BanI GGYRCC 1 cut(s) 1689
BarI GAAGNNNNNNTAC 2 cut(s) 1245, 1277
BauI CACGAG 1 cut(s) 1200
BbvCI CCTCAGC 1 cut(s) 533
BbvI GCAGC 3 cut(s) 478, 1651, 1694
BccI CCATC 1 cut(s) 1596
BceAI ACGGC 3 cut(s) 99, 809, 892
BcgI CGANNNNNNTGC 2 cut(s) 1215, 1249
BciVI GTATCC 2 cut(s) 15, 944
BcnI CCSGG 1 cut(s) 54
BcoDI GTCTC 2 cut(s) 222, 716
BfaI CTAG 4 cut(s) 114, 443, 1028, 1732
BfmI CTRYAG 3 cut(s) 453, 484, 669
BfoI RGCGCY 1 cut(s) 1693
BfrI CTTAAG 1 cut(s) 748
BfuAI ACCTGC 2 cut(s) 427, 557
BfuI GTATCC 2 cut(s) 15, 944
BglII AGATCT 2 cut(s) 116, 752
BisI GCNGC 4 cut(s) 492, 1665, 1683, 1693
BlsI GCNGC 4 cut(s) 493, 1666, 1684, 1694
Bme1390I CCNGG 1 cut(s) 54
Bme18I GGWCC 2 cut(s) 110, 1585
BmgT120I GGNCC 2 cut(s) 110, 1585
BmiI GGNNCC 6 cut(s) 111, 240, 649, 1586, 1691, 1706
BmrFI CCNGG 1 cut(s) 54
BmsI GCATC 6 cut(s) 367, 594, 811, 1347, 1362, 1464
BmtI GCTAGC 1 cut(s) 1031
BpmI CTGGAG 2 cut(s) 460, 855
Bpu10I CCTNAGC 1 cut(s) 533
Bpu14I TTCGAA 2 cut(s) 544, 1267
BpuEI CTTGAG 1 cut(s) 1136
BpuMI CCSGG 1 cut(s) 54
BsaAI YACGTR 1 cut(s) 1670
BsaHI GRCGYC 1 cut(s) 1690
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 5 cut(s) 643, 1106, 1387, 1413, 1419
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
Bsc4I CCNNNNNNNGG 1 cut(s) 943
Bse1I ACTGG 3 cut(s) 240, 1316, 1368
BseDI CCNNGG 5 cut(s) 643, 1106, 1387, 1413, 1419
BseGI GGATG 4 cut(s) 585, 1092, 1479, 1726
BseLI CCNNNNNNNGG 1 cut(s) 943
BseMII CTCAG 6 cut(s) 349, 524, 916, 1222, 1261, 1359
BseNI ACTGG 3 cut(s) 240, 1316, 1368
BsePI GCGCGC 1 cut(s) 225
BseXI GCAGC 3 cut(s) 478, 1651, 1694
BsgI GTGCAG 1 cut(s) 1650
Bsh1236I CGCG 2 cut(s) 227, 1108
BshFI GGCC 2 cut(s) 1418, 1645
BshNI GGYRCC 1 cut(s) 1689
BsiSI CCGG 1 cut(s) 54
BslFI GGGAC 4 cut(s) 123, 903, 1120, 1651
BslI CCNNNNNNNGG 1 cut(s) 943
BsmAI GTCTC 2 cut(s) 222, 716
BsmBI CGTCTC 1 cut(s) 716
BsmFI GGGAC 4 cut(s) 123, 903, 1120, 1651
BsnI GGCC 2 cut(s) 1418, 1645
Bso31I GGTCTC 1 cut(s) 222
Bsp119I TTCGAA 2 cut(s) 544, 1267
Bsp143I GATC 5 cut(s) 116, 238, 329, 752, 1043
Bsp19I CCATGG 1 cut(s) 1419
BspACI CCGC 5 cut(s) 242, 434, 1106, 1108, 1693
BspANI GGCC 2 cut(s) 1418, 1645
BspCNI CTCAG 6 cut(s) 348, 525, 915, 1221, 1260, 1360
BspFNI CGCG 2 cut(s) 227, 1108
BspHI TCATGA 1 cut(s) 264
BspLI GGNNCC 6 cut(s) 111, 240, 649, 1586, 1691, 1706
BspMI ACCTGC 2 cut(s) 427, 557
BspOI GCTAGC 1 cut(s) 1031
BspPI GGATC 3 cut(s) 233, 246, 324
BspT104I TTCGAA 2 cut(s) 544, 1267
BspT107I GGYRCC 1 cut(s) 1689
BspTI CTTAAG 1 cut(s) 748
BspTNI GGTCTC 1 cut(s) 222
BsrI ACTGG 3 cut(s) 240, 1316, 1368
BssECI CCNNGG 5 cut(s) 643, 1106, 1387, 1413, 1419
BssHII GCGCGC 1 cut(s) 225
BssMI GATC 5 cut(s) 116, 238, 329, 752, 1043
BssNI GRCGYC 1 cut(s) 1690
BssSI CACGAG 1 cut(s) 1200
BssT1I CCWWGG 2 cut(s) 643, 1419
Bst2BI CACGAG 1 cut(s) 1200
Bst4CI ACNGT 9 cut(s) 322, 488, 737, 1287, 1490, 1546, 1650, 1656, 1713
Bst6I CTCTTC 1 cut(s) 1488
BstACI GRCGYC 1 cut(s) 1690
BstAFI CTTAAG 1 cut(s) 748
BstAPI GCANNNNNTGC 1 cut(s) 1037
BstBAI YACGTR 1 cut(s) 1670
BstBI TTCGAA 2 cut(s) 544, 1267
BstC8I GCNNGC 5 cut(s) 227, 630, 692, 1029, 1680
BstDEI CTNAG 8 cut(s) 221, 335, 533, 902, 1208, 1247, 1368, 1580
BstDSI CCRYGG 3 cut(s) 1106, 1387, 1419
BstF5I GGATG 4 cut(s) 585, 1092, 1479, 1726
BstFNI CGCG 2 cut(s) 227, 1108
BstH2I RGCGCY 1 cut(s) 1693
BstHHI GCGC 3 cut(s) 227, 229, 1692
BstKTI GATC 5 cut(s) 119, 241, 332, 755, 1046
BstMAI GTCTC 2 cut(s) 222, 716
BstMBI GATC 5 cut(s) 116, 238, 329, 752, 1043
BstMWI GCNNNNNNNGC 2 cut(s) 599, 1037
BstNSI RCATGY 2 cut(s) 705, 1015
BstSCI CCNGG 1 cut(s) 52
BstSFI CTRYAG 3 cut(s) 453, 484, 669
BstUI CGCG 2 cut(s) 227, 1108
BstV1I GCAGC 3 cut(s) 478, 1651, 1694
BstX2I RGATCY 3 cut(s) 116, 238, 752
BstYI RGATCY 3 cut(s) 116, 238, 752
BsuI GTATCC 2 cut(s) 15, 944
BsuRI GGCC 2 cut(s) 1418, 1645
BtgI CCRYGG 3 cut(s) 1106, 1387, 1419
BtsCI GGATG 4 cut(s) 585, 1092, 1479, 1726
BtsI GCAGTG 2 cut(s) 411, 1086
BtsIMutI CAGTG 9 cut(s) 343, 411, 493, 1086, 1323, 1361, 1495, 1646, 1652
BveI ACCTGC 2 cut(s) 427, 557
Cac8I GCNNGC 5 cut(s) 227, 630, 692, 1029, 1680
CaiI CAGNNNCTG 2 cut(s) 965, 1138
CciI TCATGA 1 cut(s) 264
CfoI GCGC 3 cut(s) 227, 229, 1692
Cfr13I GGNCC 2 cut(s) 110, 1585
Cfr42I CCGCGG 1 cut(s) 1109
CseI GACGC 1 cut(s) 1301
Csp6I GTAC 5 cut(s) 91, 138, 733, 986, 1671
CviAII CATG 7 cut(s) 265, 603, 638, 702, 1012, 1420, 1686
CviQI GTAC 5 cut(s) 91, 138, 733, 986, 1671
DdeI CTNAG 8 cut(s) 221, 335, 533, 902, 1208, 1247, 1368, 1580
DinI GGCGCC 1 cut(s) 1691
DpnI GATC 5 cut(s) 118, 240, 331, 754, 1045
DpnII GATC 5 cut(s) 116, 238, 329, 752, 1043
EaeI YGGCCR 1 cut(s) 1416
Eam1104I CTCTTC 1 cut(s) 1488
EarI CTCTTC 1 cut(s) 1488
Eco130I CCWWGG 2 cut(s) 643, 1419
Eco31I GGTCTC 1 cut(s) 222
Eco47I GGWCC 2 cut(s) 110, 1585
Eco57I CTGAAG 3 cut(s) 51, 1331, 1581
EcoO109I RGGNCCY 1 cut(s) 110
EcoT14I CCWWGG 2 cut(s) 643, 1419
EgeI GGCGCC 1 cut(s) 1691
EheI GGCGCC 1 cut(s) 1691
ErhI CCWWGG 2 cut(s) 643, 1419
Esp3I CGTCTC 1 cut(s) 716
FaeI CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
FalI AAGNNNNNCTT 4 cut(s) 49, 81, 856, 888
FaqI GGGAC 4 cut(s) 123, 903, 1120, 1651
FatI CATG 7 cut(s) 264, 602, 637, 701, 1011, 1419, 1685
Fnu4HI GCNGC 4 cut(s) 492, 1665, 1683, 1693
FokI GGATG 3 cut(s) 572, 1099, 1486
Fsp4HI GCNGC 4 cut(s) 492, 1665, 1683, 1693
FspBI CTAG 4 cut(s) 114, 443, 1028, 1732
GlaI GCGC 3 cut(s) 226, 228, 1691
GluI GCNGC 4 cut(s) 492, 1665, 1683, 1693
GsuI CTGGAG 2 cut(s) 460, 855
HaeII RGCGCY 1 cut(s) 1693
HaeIII GGCC 2 cut(s) 1418, 1645
HapII CCGG 1 cut(s) 54
HgaI GACGC 1 cut(s) 1301
HhaI GCGC 3 cut(s) 227, 229, 1692
Hin1I GRCGYC 1 cut(s) 1690
Hin1II CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
Hin6I GCGC 3 cut(s) 225, 227, 1690
HinP1I GCGC 3 cut(s) 225, 227, 1690
HincII GTYRAC 2 cut(s) 175, 561
HindII GTYRAC 2 cut(s) 175, 561
HindIII AAGCTT 1 cut(s) 1598
HinfI GANTC 9 cut(s) 74, 473, 480, 596, 634, 773, 830, 845, 1111
HpaI GTTAAC 1 cut(s) 561
HpaII CCGG 1 cut(s) 54
HphI GGTGA 5 cut(s) 44, 1181, 1375, 1454, 1466
Hpy166II GTNNAC 6 cut(s) 175, 409, 561, 707, 1205, 1304
Hpy188I TCNGA 5 cut(s) 768, 820, 1048, 1250, 1311
Hpy188III TCNNGA 7 cut(s) 193, 265, 477, 834, 1202, 1349, 1466
Hpy8I GTNNAC 6 cut(s) 175, 409, 561, 707, 1205, 1304
HpyAV CCTTC 3 cut(s) 1202, 1695, 1711
HpyCH4III ACNGT 9 cut(s) 322, 488, 737, 1287, 1490, 1546, 1650, 1656, 1713
HpyCH4IV ACGT 2 cut(s) 709, 1669
HpyF10VI GCNNNNNNNGC 2 cut(s) 599, 1037
HpyF3I CTNAG 8 cut(s) 221, 335, 533, 902, 1208, 1247, 1368, 1580
HpySE526I ACGT 2 cut(s) 709, 1669
Hsp92I GRCGYC 1 cut(s) 1690
Hsp92II CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
HspAI GCGC 3 cut(s) 225, 227, 1690
KasI GGCGCC 1 cut(s) 1689
KspAI GTTAAC 1 cut(s) 561
KspI CCGCGG 1 cut(s) 1109
Kzo9I GATC 5 cut(s) 116, 238, 329, 752, 1043
LmnI GCTCC 4 cut(s) 55, 557, 647, 1704
Lsp1109I GCAGC 3 cut(s) 478, 1651, 1694
LweI GCATC 6 cut(s) 367, 594, 811, 1347, 1362, 1464
MaeI CTAG 4 cut(s) 114, 443, 1028, 1732
MaeII ACGT 2 cut(s) 709, 1669
MaeIII GTNAC 6 cut(s) 338, 388, 1007, 1399, 1442, 1650
MalI GATC 5 cut(s) 118, 240, 331, 754, 1045
MboI GATC 5 cut(s) 116, 238, 329, 752, 1043
MflI RGATCY 3 cut(s) 116, 238, 752
MluCI AATT 9 cut(s) 12, 519, 721, 787, 948, 1125, 1167, 1498, 1613
Mly113I GGCGCC 1 cut(s) 1690
MlyI GAGTC 2 cut(s) 467, 643
MmeI TCCRAC 1 cut(s) 1269
MnlI CCTC 9 cut(s) 344, 353, 528, 932, 1042, 1209, 1273, 1345, 1423
MroXI GAANNNNTTC 3 cut(s) 1182, 1461, 1613
MseI TTAA 5 cut(s) 560, 720, 749, 1116, 1595
MslI CAYNNNNRTG 1 cut(s) 375
MspA1I CMGCKG 1 cut(s) 1108
MspCI CTTAAG 1 cut(s) 748
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 1 cut(s) 54
MvnI CGCG 2 cut(s) 227, 1108
MwoI GCNNNNNNNGC 2 cut(s) 599, 1037
NarI GGCGCC 1 cut(s) 1690
NciI CCSGG 1 cut(s) 54
NcoI CCATGG 1 cut(s) 1419
NdeII GATC 5 cut(s) 116, 238, 329, 752, 1043
NheI GCTAGC 1 cut(s) 1027
NlaIII CATG 7 cut(s) 268, 606, 641, 705, 1015, 1423, 1689
NlaIV GGNNCC 6 cut(s) 111, 240, 649, 1586, 1691, 1706
NmeAIII GCCGAG 1 cut(s) 1394
NmuCI GTSAC 4 cut(s) 338, 1399, 1442, 1650
NspI RCATGY 2 cut(s) 705, 1015
NspV TTCGAA 2 cut(s) 544, 1267
PagI TCATGA 1 cut(s) 264
PaqCI CACCTGC 1 cut(s) 427
PauI GCGCGC 1 cut(s) 225
PdmI GAANNNNTTC 3 cut(s) 1182, 1461, 1613
PfeI GAWTC 7 cut(s) 74, 480, 596, 773, 830, 845, 1111
PfoI TCCNGGA 1 cut(s) 52
PkrI GCNGC 4 cut(s) 493, 1666, 1684, 1694
PleI GAGTC 2 cut(s) 467, 642
PluTI GGCGCC 1 cut(s) 1693
PpsI GAGTC 2 cut(s) 467, 642
Ppu21I YACGTR 1 cut(s) 1670
PpuMI RGGWCCY 1 cut(s) 110
PsiI TTATAA 2 cut(s) 518, 572
Psp5II RGGWCCY 1 cut(s) 110
PspN4I GGNNCC 6 cut(s) 111, 240, 649, 1586, 1691, 1706
PspPI GGNCC 2 cut(s) 110, 1585
PspPPI RGGWCCY 1 cut(s) 110
PstNI CAGNNNCTG 2 cut(s) 965, 1138
PsuI RGATCY 3 cut(s) 116, 238, 752
PteI GCGCGC 1 cut(s) 225
RsaI GTAC 5 cut(s) 92, 139, 734, 987, 1672
RsaNI GTAC 5 cut(s) 91, 138, 733, 986, 1671
RseI CAYNNNNRTG 1 cut(s) 375
SacII CCGCGG 1 cut(s) 1109
SaqAI TTAA 5 cut(s) 560, 720, 749, 1116, 1595
SatI GCNGC 4 cut(s) 492, 1665, 1683, 1693
Sau3AI GATC 5 cut(s) 116, 238, 329, 752, 1043
Sau96I GGNCC 2 cut(s) 110, 1585
SchI GAGTC 2 cut(s) 467, 643
ScrFI CCNGG 1 cut(s) 54
SfaNI GCATC 6 cut(s) 367, 594, 811, 1347, 1362, 1464
SfcI CTRYAG 3 cut(s) 453, 484, 669
SfoI GGCGCC 1 cut(s) 1691
Sfr303I CCGCGG 1 cut(s) 1109
SfuI TTCGAA 2 cut(s) 544, 1267
SgrBI CCGCGG 1 cut(s) 1109
SinI GGWCC 2 cut(s) 110, 1585
SmiMI CAYNNNNRTG 1 cut(s) 375
SmlI CTYRAG 2 cut(s) 748, 1151
SmoI CTYRAG 2 cut(s) 748, 1151
Sse9I AATT 9 cut(s) 12, 519, 721, 787, 948, 1125, 1167, 1498, 1613
SsiI CCGC 5 cut(s) 242, 434, 1106, 1108, 1693
SspDI GGCGCC 1 cut(s) 1689
SspI AATATT 1 cut(s) 303
SspMI CTAG 4 cut(s) 114, 443, 1028, 1732
StyD4I CCNGG 1 cut(s) 52
StyI CCWWGG 2 cut(s) 643, 1419
TaaI ACNGT 9 cut(s) 322, 488, 737, 1287, 1490, 1546, 1650, 1656, 1713
TaiI ACGT 2 cut(s) 712, 1672
TaqI TCGA 5 cut(s) 375, 544, 1123, 1267, 1467
TasI AATT 9 cut(s) 12, 519, 721, 787, 948, 1125, 1167, 1498, 1613
TatI WGTACW 1 cut(s) 732
TauI GCSGC 1 cut(s) 1695
TfiI GAWTC 7 cut(s) 74, 480, 596, 773, 830, 845, 1111
Tru1I TTAA 5 cut(s) 560, 720, 749, 1116, 1595
Tru9I TTAA 5 cut(s) 560, 720, 749, 1116, 1595
TscAI CASTG 9 cut(s) 343, 411, 493, 1086, 1323, 1368, 1495, 1653, 1659
TseFI GTSAC 4 cut(s) 338, 1399, 1442, 1650
TseI GCWGC 3 cut(s) 491, 1664, 1682
Tsp45I GTSAC 4 cut(s) 338, 1399, 1442, 1650
TspDTI ATGAA 1 cut(s) 347
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 9 cut(s) 343, 411, 493, 1086, 1323, 1368, 1495, 1653, 1659
Vha464I CTTAAG 1 cut(s) 748
VpaK11BI GGWCC 2 cut(s) 110, 1585
XapI RAATTY 6 cut(s) 12, 787, 948, 1125, 1498, 1613
XceI RCATGY 2 cut(s) 705, 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 1417
XmnI GAANNNNTTC 3 cut(s) 1182, 1461, 1613
XspI CTAG 4 cut(s) 114, 443, 1028, 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.