Rroxscaffold_4G00279480

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000755
Physical Location & Seq
Reverse (-)
2275857 .. 2278704
2848 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00279480.1

Sequence Viewer

Length: 1851 bp
ATGTCGATTCAACTTTCACAGACTGGTGATATAGAAGAAAATGGTGAAGAGCGAATTCAGAGTGTTAATGGTACTAATTCAAGGGAAAGTTTAGCATCAGTGCACTCTGCTGTGAATAAGGTCTATAGAGCTATGGGGCCTGGTTATAAAGGGCTAAAGAGTTTTGGGAAAATCATGAAAATTTATTATGGAGTTTTGTCTATAGGCTTGAGTTCCAATGATAAAATTCTTCGCCGCCAGAAATTAAACCAGCAAAGGTGGAATAAGATGCTTCTTGTTCTGTGTGTCATCGCGCTCTCACTGGATCCTTTGTTTTGTTATATTCTTGAGGTTAATGATGAGAAGAACTGCCTTGGATTGGACAGAACATTAGGAGCTATAGCTATTGTTTTGCGATTTGTGGTCGATTTCTTTTATGTGTTCTATATCATTTATCAATTTCGTGCTAGCGTGGCCACTCTTTCGTCTCAATCATCGAGAGAAGGTGAACCGGTTCCAGATACTCGAGCAAGAGCATGGAGATATTTGTTGTTGTACTTCCTATTTGACATACTTGTAATTCTACCACTTCCACAGGTGGTAGTTTTTGCTATCATTCTACGAATGAATAACTCGAGGGTATTCCATACAATACAGTCATTGTACTTTATAGTTATCTGTCAATTTGTGCTAAGGGTTCTTCGAATCTGCTCCTTGTTAAAAAAAGCTATAAGGTCTTCTGGCGTCCGTCTCGAAACTGCATGGGCTAAAGCTGCCTTCAATCTCTTTCTTTATGTGCTTGCCAGTCATGTTGTTGGAGCCTTTTGGTACTTATTTTCAATAGAAAGAAGAGCATCTTGCTGGCGAAAAGCTTGTAAAACTCATGCTACTGCTTACTGTTGCTCTTTGGATGAGTCCTGCTTTTCAAAGACACCAAATTCCACAGATTTTAATTTTGGAATATACAAGGGTGCATCTGCTGTCATTGGATCAACAGATTTCATGACAAAGATCTCTTACTGCTTTTGGTGGGGACTGAGAAACCTGAGTTCTCTGGGTCAAAACCTCGAAACAAGTACCTATGTGTGGGAAGTCTGCTTCTCAGTTTTTGTTTCACTTTCTGGATTGATATTGTTGGCTTTTCTTATTGGAAATATGCAGACATATTTGCAATCGAAAATAGTAAGGCTGGAGAAAATGAGATTGAAGGGGCAAGAGATAGACTTGTGGATGGCAATCCATTCCCTTCCTCGGGAGCTCAAGAAGCAAATAAGGCGATACCAGAAATACAAATGGCAAGTAACTAGAGGTGTTGATGTGGAGAGTCTTCTTCACAATCTTCCCCGGGACATCAGAAGAGAAACTAAGCTGCATCTATGCTCCAGTTCACTCAGTAAAGTTCCAATGTTTCAAAATATGGATAAACAATTGCTCGATGCAATATGTGATCATCTAAAGCCAGTGCTTTACATAAAGCGGAACTTCATATTCCGGAAAGGAGACCCTTTTGATGAGATGTTGTTCATCACTTGCGGCAAGTTATTGACTTACACCACCGCAGACAGTGCAGGTGCTGATTGTCTCGGAAAGGATGACTTCTATGGCCAAGAACTTCTTGACTGGGTGCTAAGGACTTATTCCAATCCCGGCGTATCCAACCTTCCCTTCTCTACCAAAACAGTCCAAGCGCATTCGGATGTTGAAGTGTTTGCTCTAAGGGCCAATGACTTGAAAAATGTAGTGTCTAAGTTCTGGTGGCTTTTCCCCAGCTCTGGTTTGGAGCAAGCACGCAAGCCAAGGGCAGCTCAGGCTTTGCAAGCAGCCTGGCGCCGCCATAAATACCGTCAAAGACTCGCCAATCTAACCGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

616

Amino Acids

70.73

Weight (kDa)

9.55

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 93 - 385 1.8e-14 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 147
AarI CACCTGC 1 cut(s) 1538
Acc36I ACCTGC 1 cut(s) 1538
AccB1I GGYRCC 1 cut(s) 1806
AccII CGCG 1 cut(s) 293
AccIII TCCGGA 1 cut(s) 1470
AciI CCGC 5 cut(s) 235, 1456, 1512, 1536, 1810
AclWI GGATC 3 cut(s) 299, 312, 976
AcoI YGGCCR 2 cut(s) 453, 1582
AcsI RAATTY 4 cut(s) 54, 180, 225, 916
AcyI GRCGYC 2 cut(s) 723, 1807
AfaI GTAC 5 cut(s) 73, 536, 644, 809, 1057
AfiI CCNNNNNNNGG 5 cut(s) 358, 1065, 1230, 1231, 1751
AgeI ACCGGT 1 cut(s) 490
AgsI TTSAA 9 cut(s) 11, 81, 760, 819, 906, 1186, 1391, 1682, 1711
AjnI CCWGG 2 cut(s) 139, 1802
AjuI GAANNNNNNNTTGG 2 cut(s) 1628, 1660
Alw21I GWGCWC 2 cut(s) 105, 1239
Alw26I GTCTC 4 cut(s) 471, 734, 1473, 1565
Alw44I GTGCAC 1 cut(s) 101
AlwI GGATC 3 cut(s) 299, 312, 976
AlwNI CAGNNNCTG 1 cut(s) 1553
Ama87I CYCGRG 4 cut(s) 504, 613, 1230, 1323
Aor13HI TCCGGA 1 cut(s) 1470
AoxI GGCC 4 cut(s) 137, 453, 1582, 1698
ApaLI GTGCAC 1 cut(s) 101
ApeKI GCWGC 4 cut(s) 752, 1348, 1781, 1799
ApoI RAATTY 4 cut(s) 54, 180, 225, 916
AsiGI ACCGGT 1 cut(s) 490
Asp700I GAANNNNTTC 1 cut(s) 492
AspLEI GCGC 3 cut(s) 295, 1669, 1809
AspS9I GGNCC 2 cut(s) 137, 1698
AsuC2I CCSGG 3 cut(s) 1324, 1325, 1626
AsuHPI GGTGA 3 cut(s) 38, 56, 497
AsuII TTCGAA 1 cut(s) 682
AsuNHI GCTAGC 1 cut(s) 446
AvaI CYCGRG 4 cut(s) 504, 613, 1230, 1323
BaeGI GKGCMC 1 cut(s) 105
BalI TGGCCA 2 cut(s) 455, 1584
BamHI GGATCC 1 cut(s) 304
BanI GGYRCC 1 cut(s) 1806
BanII GRGCYC 1 cut(s) 1239
BarI GAAGNNNNNNTAC 2 cut(s) 1623, 1655
BbsI GAAGAC 2 cut(s) 708, 1298
Bbv12I GWGCWC 2 cut(s) 105, 1239
BbvI GCAGC 4 cut(s) 739, 1335, 1793, 1811
BccI CCATC 1 cut(s) 1204
BciT130I CCWGG 2 cut(s) 141, 1804
BciVI GTATCC 1 cut(s) 1642
BclI TGATCA 1 cut(s) 1426
BcnI CCSGG 3 cut(s) 1324, 1325, 1626
BcoDI GTCTC 4 cut(s) 471, 734, 1473, 1565
BfaI CTAG 2 cut(s) 447, 1284
BfmI CTRYAG 3 cut(s) 124, 201, 378
BfoI RGCGCY 1 cut(s) 1810
BfuAI ACCTGC 1 cut(s) 1538
BfuI GTATCC 1 cut(s) 1642
BglII AGATCT 1 cut(s) 990
BisI GCNGC 7 cut(s) 235, 753, 1349, 1513, 1782, 1800, 1810
BlsI GCNGC 7 cut(s) 236, 754, 1350, 1514, 1783, 1801, 1811
Bme1390I CCNGG 5 cut(s) 141, 1324, 1325, 1626, 1804
BmeT110I CYCGRG 4 cut(s) 504, 613, 1230, 1323
BmgT120I GGNCC 2 cut(s) 137, 1698
BmiI GGNNCC 5 cut(s) 138, 306, 495, 799, 1808
BmrFI CCNGG 5 cut(s) 141, 1324, 1325, 1626, 1804
BmrI ACTGGG 1 cut(s) 1609
BmsI GCATC 6 cut(s) 104, 258, 842, 962, 1360, 1405
BmtI GCTAGC 1 cut(s) 450
BmuI ACTGGG 1 cut(s) 1609
BpiI GAAGAC 2 cut(s) 708, 1298
BpmI CTGGAG 2 cut(s) 1190, 1345
Bpu10I CCTNAGC 3 cut(s) 671, 1607, 1785
Bpu14I TTCGAA 1 cut(s) 682
BpuEI CTTGAG 3 cut(s) 229, 347, 1223
BpuMI CCSGG 3 cut(s) 1324, 1325, 1626
BsaBI GATNNNNATC 1 cut(s) 1214
BsaHI GRCGYC 2 cut(s) 723, 1807
BsaI GGTCTC 1 cut(s) 1473
BsaJI CCNNGG 5 cut(s) 352, 1229, 1322, 1323, 1775
BsaWI WCCGGW 2 cut(s) 490, 1470
Bsc4I CCNNNNNNNGG 5 cut(s) 358, 1065, 1230, 1231, 1751
Bse118I RCCGGY 1 cut(s) 490
Bse1I ACTGG 6 cut(s) 28, 306, 783, 1362, 1439, 1604
Bse8I GATNNNNATC 1 cut(s) 1214
BseAI TCCGGA 1 cut(s) 1470
BseBI CCWGG 2 cut(s) 141, 1804
BseDI CCNNGG 5 cut(s) 352, 1229, 1322, 1323, 1775
BseGI GGATG 4 cut(s) 895, 1215, 1576, 1681
BseJI GATNNNNATC 1 cut(s) 1214
BseLI CCNNNNNNNGG 5 cut(s) 358, 1065, 1230, 1231, 1751
BseMII CTCAG 5 cut(s) 1007, 1016, 1095, 1384, 1799
BseNI ACTGG 6 cut(s) 28, 306, 783, 1362, 1439, 1604
BseSI GKGCMC 1 cut(s) 105
BseXI GCAGC 4 cut(s) 739, 1335, 1793, 1811
BseYI CCCAGC 1 cut(s) 1745
BsgI GTGCAG 1 cut(s) 1566
Bsh1236I CGCG 1 cut(s) 293
BshFI GGCC 4 cut(s) 139, 455, 1584, 1700
BshNI GGYRCC 1 cut(s) 1806
BshTI ACCGGT 1 cut(s) 490
BsiHKAI GWGCWC 2 cut(s) 105, 1239
BsiHKCI CYCGRG 4 cut(s) 504, 613, 1230, 1323
BsiSI CCGG 4 cut(s) 491, 1324, 1471, 1626
BslFI GGGAC 2 cut(s) 1026, 1340
BslI CCNNNNNNNGG 5 cut(s) 358, 1065, 1230, 1231, 1751
BsmAI GTCTC 4 cut(s) 471, 734, 1473, 1565
BsmBI CGTCTC 2 cut(s) 471, 734
BsmFI GGGAC 2 cut(s) 1026, 1340
BsmI GAATGC 1 cut(s) 1669
BsnI GGCC 4 cut(s) 139, 455, 1584, 1700
Bso31I GGTCTC 1 cut(s) 1473
BsoBI CYCGRG 4 cut(s) 504, 613, 1230, 1323
Bsp119I TTCGAA 1 cut(s) 682
Bsp1286I GDGCHC 2 cut(s) 105, 1239
Bsp13I TCCGGA 1 cut(s) 1470
Bsp143I GATC 4 cut(s) 304, 968, 990, 1426
BspACI CCGC 5 cut(s) 235, 1456, 1512, 1536, 1810
BspANI GGCC 4 cut(s) 139, 455, 1584, 1700
BspCNI CTCAG 5 cut(s) 1008, 1017, 1094, 1383, 1798
BspEI TCCGGA 1 cut(s) 1470
BspFNI CGCG 1 cut(s) 293
BspHI TCATGA 2 cut(s) 174, 981
BspLI GGNNCC 5 cut(s) 138, 306, 495, 799, 1808
BspMI ACCTGC 1 cut(s) 1538
BspOI GCTAGC 1 cut(s) 450
BspPI GGATC 3 cut(s) 299, 312, 976
BspQI GCTCTTC 2 cut(s) 42, 823
BspT104I TTCGAA 1 cut(s) 682
BspT107I GGYRCC 1 cut(s) 1806
BspTNI GGTCTC 1 cut(s) 1473
BsrFI RCCGGY 1 cut(s) 490
BsrI ACTGG 6 cut(s) 28, 306, 783, 1362, 1439, 1604
BssAI RCCGGY 1 cut(s) 490
BssECI CCNNGG 5 cut(s) 352, 1229, 1322, 1323, 1775
BssMI GATC 4 cut(s) 304, 968, 990, 1426
BssNI GRCGYC 2 cut(s) 723, 1807
BssT1I CCWWGG 2 cut(s) 352, 1775
Bst2UI CCWGG 2 cut(s) 141, 1804
Bst4CI ACNGT 6 cut(s) 636, 878, 1544, 1660, 1823, 1846
Bst6I CTCTTC 3 cut(s) 42, 823, 1330
BstACI GRCGYC 2 cut(s) 723, 1807
BstAPI GCANNNNNTGC 1 cut(s) 1544
BstBI TTCGAA 1 cut(s) 682
BstC8I GCNNGC 7 cut(s) 448, 780, 842, 1764, 1768, 1772, 1797
BstF5I GGATG 4 cut(s) 895, 1215, 1576, 1681
BstFNI CGCG 1 cut(s) 293
BstH2I RGCGCY 1 cut(s) 1810
BstHHI GCGC 3 cut(s) 295, 1669, 1809
BstKTI GATC 4 cut(s) 307, 971, 993, 1429
BstMAI GTCTC 4 cut(s) 471, 734, 1473, 1565
BstMBI GATC 4 cut(s) 304, 968, 990, 1426
BstMWI GCNNNNNNNGC 8 cut(s) 452, 752, 1243, 1252, 1544, 1697, 1787, 1796
BstNI CCWGG 2 cut(s) 141, 1804
BstSCI CCNGG 5 cut(s) 139, 1322, 1323, 1624, 1802
BstSFI CTRYAG 3 cut(s) 124, 201, 378
BstSLI GKGCMC 1 cut(s) 105
BstUI CGCG 1 cut(s) 293
BstV1I GCAGC 4 cut(s) 739, 1335, 1793, 1811
BstV2I GAAGAC 2 cut(s) 708, 1298
BstX2I RGATCY 2 cut(s) 304, 990
BstYI RGATCY 2 cut(s) 304, 990
BsuI GTATCC 1 cut(s) 1642
BsuRI GGCC 4 cut(s) 139, 455, 1584, 1700
BtgZI GCGATG 1 cut(s) 274
BtsCI GGATG 4 cut(s) 895, 1215, 1576, 1681
BtsIMutI CAGTG 4 cut(s) 105, 299, 1446, 1549
BveI ACCTGC 1 cut(s) 1538
Cac8I GCNNGC 7 cut(s) 448, 780, 842, 1764, 1768, 1772, 1797
CaiI CAGNNNCTG 1 cut(s) 1553
CciI TCATGA 2 cut(s) 174, 981
CfoI GCGC 3 cut(s) 295, 1669, 1809
Cfr10I RCCGGY 1 cut(s) 490
Cfr13I GGNCC 2 cut(s) 137, 1698
Cfr9I CCCGGG 1 cut(s) 1323
CseI GACGC 1 cut(s) 712
Csp6I GTAC 5 cut(s) 72, 535, 643, 808, 1056
CspAI ACCGGT 1 cut(s) 490
CviAII CATG 6 cut(s) 175, 516, 741, 788, 863, 982
CviQI GTAC 5 cut(s) 72, 535, 643, 808, 1056
DinI GGCGCC 1 cut(s) 1808
DpnI GATC 4 cut(s) 306, 970, 992, 1428
DpnII GATC 4 cut(s) 304, 968, 990, 1426
EaeI YGGCCR 2 cut(s) 453, 1582
Eam1104I CTCTTC 3 cut(s) 42, 823, 1330
EarI CTCTTC 3 cut(s) 42, 823, 1330
Ecl136II GAGCTC 1 cut(s) 1237
Eco130I CCWWGG 2 cut(s) 352, 1775
Eco24I GRGCYC 1 cut(s) 1239
Eco31I GGTCTC 1 cut(s) 1473
Eco53kI GAGCTC 1 cut(s) 1237
Eco88I CYCGRG 4 cut(s) 504, 613, 1230, 1323
EcoICRI GAGCTC 1 cut(s) 1237
EcoO109I RGGNCCY 1 cut(s) 137
EcoRI GAATTC 1 cut(s) 54
EcoRII CCWGG 2 cut(s) 139, 1802
EcoT14I CCWWGG 2 cut(s) 352, 1775
EcoT38I GRGCYC 1 cut(s) 1239
EgeI GGCGCC 1 cut(s) 1808
EheI GGCGCC 1 cut(s) 1808
ErhI CCWWGG 2 cut(s) 352, 1775
Esp3I CGTCTC 2 cut(s) 471, 734
FaeI CATG 6 cut(s) 178, 519, 744, 791, 866, 985
FalI AAGNNNNNCTT 8 cut(s) 820, 852, 1445, 1477, 1559, 1591, 1578, 1610
FaqI GGGAC 2 cut(s) 1026, 1340
FatI CATG 6 cut(s) 174, 515, 740, 787, 862, 981
FbaI TGATCA 1 cut(s) 1426
Fnu4HI GCNGC 7 cut(s) 235, 753, 1349, 1513, 1782, 1800, 1810
FokI GGATG 4 cut(s) 902, 1222, 1583, 1688
FriOI GRGCYC 1 cut(s) 1239
Fsp4HI GCNGC 7 cut(s) 235, 753, 1349, 1513, 1782, 1800, 1810
FspBI CTAG 2 cut(s) 447, 1284
GlaI GCGC 3 cut(s) 294, 1668, 1808
GluI GCNGC 7 cut(s) 235, 753, 1349, 1513, 1782, 1800, 1810
GsaI CCCAGC 1 cut(s) 1749
GsuI CTGGAG 2 cut(s) 1190, 1345
HaeII RGCGCY 1 cut(s) 1810
HaeIII GGCC 4 cut(s) 139, 455, 1584, 1700
HapII CCGG 4 cut(s) 491, 1324, 1471, 1626
HgaI GACGC 1 cut(s) 712
HhaI GCGC 3 cut(s) 295, 1669, 1809
Hin1I GRCGYC 2 cut(s) 723, 1807
Hin1II CATG 6 cut(s) 178, 519, 744, 791, 866, 985
Hin6I GCGC 3 cut(s) 293, 1667, 1807
HinP1I GCGC 3 cut(s) 293, 1667, 1807
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 5 cut(s) 7, 684, 893, 1303, 1830
HpaII CCGG 4 cut(s) 491, 1324, 1471, 1626
HphI GGTGA 3 cut(s) 38, 56, 497
Hpy166II GTNNAC 3 cut(s) 103, 488, 1367
Hpy188I TCNGA 4 cut(s) 60, 1334, 1565, 1675
Hpy8I GTNNAC 3 cut(s) 103, 488, 1367
HpyAV CCTTC 6 cut(s) 476, 766, 1180, 1235, 1649, 1654
HpyCH4III ACNGT 6 cut(s) 636, 878, 1544, 1660, 1823, 1846
HpyCH4V TGCA 9 cut(s) 103, 740, 953, 1138, 1150, 1351, 1418, 1547, 1795
HpyF10VI GCNNNNNNNGC 8 cut(s) 452, 752, 1243, 1252, 1544, 1697, 1787, 1796
Hsp92I GRCGYC 2 cut(s) 723, 1807
Hsp92II CATG 6 cut(s) 178, 519, 744, 791, 866, 985
HspAI GCGC 3 cut(s) 293, 1667, 1807
KasI GGCGCC 1 cut(s) 1806
Kpn2I TCCGGA 1 cut(s) 1470
Ksp22I TGATCA 1 cut(s) 1426
Kzo9I GATC 4 cut(s) 304, 968, 990, 1426
LguI GCTCTTC 2 cut(s) 42, 823
LmnI GCTCC 6 cut(s) 374, 695, 797, 1234, 1364, 1759
Lsp1109I GCAGC 4 cut(s) 739, 1335, 1793, 1811
LweI GCATC 6 cut(s) 104, 258, 842, 962, 1360, 1405
MaeI CTAG 2 cut(s) 447, 1284
MaeIII GTNAC 1 cut(s) 1279
MalI GATC 4 cut(s) 306, 970, 992, 1428
MboI GATC 4 cut(s) 304, 968, 990, 1426
MfeI CAATTG 1 cut(s) 1406
MflI RGATCY 2 cut(s) 304, 990
MhlI GDGCHC 2 cut(s) 105, 1239
MlsI TGGCCA 2 cut(s) 455, 1584
MluNI TGGCCA 2 cut(s) 455, 1584
Mly113I GGCGCC 1 cut(s) 1807
MlyI GAGTC 3 cut(s) 902, 1312, 1824
MmeI TCCRAC 2 cut(s) 775, 1659
MnlI CCTC 5 cut(s) 322, 609, 1055, 1239, 1280
Mox20I TGGCCA 2 cut(s) 455, 1584
MroI TCCGGA 1 cut(s) 1470
MroXI GAANNNNTTC 1 cut(s) 492
MscI TGGCCA 2 cut(s) 455, 1584
MseI TTAA 5 cut(s) 66, 245, 333, 698, 930
MslI CAYNNNNRTG 1 cut(s) 1674
Msp20I TGGCCA 2 cut(s) 455, 1584
MspI CCGG 4 cut(s) 491, 1324, 1471, 1626
MspR9I CCNGG 5 cut(s) 141, 1324, 1325, 1626, 1804
MunI CAATTG 1 cut(s) 1406
Mva1269I GAATGC 1 cut(s) 1669
MvaI CCWGG 2 cut(s) 141, 1804
MvnI CGCG 1 cut(s) 293
MwoI GCNNNNNNNGC 8 cut(s) 452, 752, 1243, 1252, 1544, 1697, 1787, 1796
NarI GGCGCC 1 cut(s) 1807
NciI CCSGG 3 cut(s) 1324, 1325, 1626
NdeII GATC 4 cut(s) 304, 968, 990, 1426
NheI GCTAGC 1 cut(s) 446
NlaIII CATG 6 cut(s) 178, 519, 744, 791, 866, 985
NlaIV GGNNCC 5 cut(s) 138, 306, 495, 799, 1808
NspV TTCGAA 1 cut(s) 682
PaeR7I CTCGAG 2 cut(s) 504, 613
PagI TCATGA 2 cut(s) 174, 981
PaqCI CACCTGC 1 cut(s) 1538
PciSI GCTCTTC 2 cut(s) 42, 823
PctI GAATGC 1 cut(s) 1669
PdmI GAANNNNTTC 1 cut(s) 492
PfeI GAWTC 2 cut(s) 7, 684
PinAI ACCGGT 1 cut(s) 490
PkrI GCNGC 7 cut(s) 236, 754, 1350, 1514, 1783, 1801, 1811
PleI GAGTC 3 cut(s) 901, 1311, 1824
PluTI GGCGCC 1 cut(s) 1810
PpsI GAGTC 3 cut(s) 901, 1311, 1824
PsiI TTATAA 1 cut(s) 147
Psp124BI GAGCTC 1 cut(s) 1239
Psp6I CCWGG 2 cut(s) 139, 1802
PspFI CCCAGC 1 cut(s) 1745
PspGI CCWGG 2 cut(s) 139, 1802
PspN4I GGNNCC 5 cut(s) 138, 306, 495, 799, 1808
PspPI GGNCC 2 cut(s) 137, 1698
PspXI VCTCGAGB 2 cut(s) 504, 613
PstNI CAGNNNCTG 1 cut(s) 1553
PsuI RGATCY 2 cut(s) 304, 990
RsaI GTAC 5 cut(s) 73, 536, 644, 809, 1057
RsaNI GTAC 5 cut(s) 72, 535, 643, 808, 1056
RseI CAYNNNNRTG 1 cut(s) 1674
SacI GAGCTC 1 cut(s) 1239
SapI GCTCTTC 2 cut(s) 42, 823
SaqAI TTAA 5 cut(s) 66, 245, 333, 698, 930
SatI GCNGC 7 cut(s) 235, 753, 1349, 1513, 1782, 1800, 1810
Sau3AI GATC 4 cut(s) 304, 968, 990, 1426
Sau96I GGNCC 2 cut(s) 137, 1698
SchI GAGTC 3 cut(s) 902, 1312, 1824
ScrFI CCNGG 5 cut(s) 141, 1324, 1325, 1626, 1804
SduI GDGCHC 2 cut(s) 105, 1239
SfaNI GCATC 6 cut(s) 104, 258, 842, 962, 1360, 1405
SfcI CTRYAG 3 cut(s) 124, 201, 378
SfoI GGCGCC 1 cut(s) 1808
Sfr274I CTCGAG 2 cut(s) 504, 613
SfuI TTCGAA 1 cut(s) 682
SlaI CTCGAG 2 cut(s) 504, 613
SmaI CCCGGG 1 cut(s) 1325
SmiMI CAYNNNNRTG 1 cut(s) 1674
SmlI CTYRAG 5 cut(s) 208, 326, 504, 613, 1238
SmoI CTYRAG 5 cut(s) 208, 326, 504, 613, 1238
SsiI CCGC 5 cut(s) 235, 1456, 1512, 1536, 1810
SspDI GGCGCC 1 cut(s) 1806
SspMI CTAG 2 cut(s) 447, 1284
SstI GAGCTC 1 cut(s) 1239
StyD4I CCNGG 5 cut(s) 139, 1322, 1323, 1624, 1802
StyI CCWWGG 2 cut(s) 352, 1775
TaaI ACNGT 6 cut(s) 636, 878, 1544, 1660, 1823, 1846
TatI WGTACW 2 cut(s) 534, 642
TauI GCSGC 3 cut(s) 237, 1515, 1812
TfiI GAWTC 2 cut(s) 7, 684
Tru1I TTAA 5 cut(s) 66, 245, 333, 698, 930
Tru9I TTAA 5 cut(s) 66, 245, 333, 698, 930
TscAI CASTG 4 cut(s) 105, 306, 1446, 1549
TseI GCWGC 4 cut(s) 752, 1348, 1781, 1799
TspDTI ATGAA 5 cut(s) 191, 620, 970, 1453, 1492
TspGWI ACGGA 1 cut(s) 716
TspMI CCCGGG 1 cut(s) 1323
TspRI CASTG 4 cut(s) 105, 306, 1446, 1549
VneI GTGCAC 1 cut(s) 101
XapI RAATTY 4 cut(s) 54, 180, 225, 916
XcmI CCANNNNNNNNNTGG 1 cut(s) 1753
XhoI CTCGAG 2 cut(s) 504, 613
XmaI CCCGGG 1 cut(s) 1323
XmnI GAANNNNTTC 1 cut(s) 492
XspI CTAG 2 cut(s) 447, 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.