Rw1G038690

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000755
Physical Location & Seq
Forward (+)
66249570 .. 66252342
2773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G038690.1

Sequence Viewer

Length: 1983 bp
ATGGAGGCTCAAATTTCAAGGACACAGAGCTGTGACTTAGAAGAGAATATTAATGCTGAAGAGAAAACTCAAAAACCTGCTGGTACTACTCAGTCAAGTGCAAGTTCAGCATCAAAAGATTCTGTTGTAAGTAAGTTTAAAGGGCTAGTGATTAGTTTTAGGAAAACAATGAAAACTTATGGTCGAGATTTGTCCATAGGCTTACGTTCCAAGAATAAGATTGTTGACTGCCAGCATAAATTAGTCCAGCAAAGGTGGAATAAAATACTTCCTGTTCTGTGTGTTATTGCGCTATCACTGGATCCTTTGTTTTGTTATCTCCTTGTGGTCAATGATGAGAAGAAGTGCCTTGGATTGGACAGAAGATTAGGGGCCATAGCCATTGCTTTGCGATTTGTGGTGGATTTCTGTTATCTATTATATTTCATTTATCGATTTCGTGCTAGTGTTGTTACTCTTTCCTCTCGATCATCGAGCAAAAGTGAATTGGTTCCATATACTCAGACAAACGCATGGAAATATCTGTTATTCTACTTCCTATTCGACATACTGGTGATTCTTCCACTTCCACAGGTGGCAGTTTTTTATGTCATTCCAAGATTGAATAACTCAAGGGTTTTCCATGCAACAGAGTCATTGTACTTTATACCTATCTTTCAATATGTGCTAAGGGTTCTTCGAATCTGTTCCTTGTTAAACGAAGCTACCAGGTCTTCTGGCATCCTTGCCGAAACTGCATGGGCTAAAGCTACCTTTAATCTTTTTCTTTACATGCTTGCTAGTCATGTTGTTGGAGCCTTTTGGTACTTCTTTTCGATAGAAAGGAAATTATCTTGCTGGCAACAATCCTGTAAAATACATGCTAGTGCTTACTGTTCGTTATATTGCGATGATACATTTGGAGCTAGCACTTTTCTGAATGACTCTTGTTCTCCAGAGTCGACATCAAATTCCACATTCTTTGATTTTGGGATATACTTTGGTGCTCTTGAATCTCGTGTCATTGAATCAACAGAACTAATACCAAAAGTTTCTTACTGCTTTTGGTGGGGACTGCAAAATCTGAGTTCCCTTGGTCAAGGCCTCAAAACTAGTACCTACGTATGGGAAATCTACTTCTCAGTTTTTGTTTCGCTTTCTGGCTTGATACTTTTTGCATTTCTTATTGGAAATATGCAGACGTATTTGCAATCGAGAACTGCAAGGTTGGAGGAAATGAGATTGAAAGGGCAAGAGATAGAGTTGTGGATGGCTTTCCATTCCCTTCCTCGGAAGCTTAAGAAGAAGATTTGGCGATTCCAGAAATACAAATGGCAAGAGACTAGAGGTGTTGATGTGGAGAGTTTCCTTCACAATCTTCCCACAGACATCAGAAGAGAAACAAAGCAACATCTTTGCTCCGTTCCACTCAGGAAAGTTAAAATACTTCAAAACATGAATCAACGATTGTTTGACGCAATCTGTGATCACTTGAAGCCGGTGCTTTACATAGAGCACAGCTACATAATGCGAAAGGGAGACCCTCTCGATGAGATGTTGTTTATCACTCGCGGCAAAGTGTTGACTTACACCACAGAAGGCAATGCAAGCGATGTTTGTCTTGAAAAGGGTGACTTCTATGGCCAAGAACTTCTTGACTGGGTGCTCAGGAATCCCAATCCCAGCCTATCCAACCTTCCCTTCTCATCCAAAACAGTCCAAGCACATACCAAAGTTGAAGTGTTTGCTTTAAGGGCCAATGACTTGAAGAATGTAGTCTCTAAGTTCTGGTGGCTTTTCCACACTAGCTCCAGTTTGGAGCAATGGCGCGAACCGAGGGCAGCTCAGGCTTTGCAAGCAGCATGGCGCCGATATAAACAGCTTCCAAAAACTCCCCGGTCTAAGGAGGGCAGTGTCTCTGCCGCCCACCGCACTGCAGACCTGCAGTCCCAGAAACCATCGTATCATTATAGAGATGTAAGCACATTAATTAGTTCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans cNMP_binding

Protein Analysis

660

Amino Acids

76.15

Weight (kDa)

9.35

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 125 - 402 9e-13 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 85, 1929
AccB1I GGYRCC 1 cut(s) 1845
AccI GTMKAC 1 cut(s) 941
AccII CGCG 2 cut(s) 1551, 1809
AciI CCGC 3 cut(s) 1551, 1902, 1909
AclWI GGATC 2 cut(s) 296, 309
AcoI YGGCCR 1 cut(s) 1621
AcsI RAATTY 2 cut(s) 12, 949
AcuI CTGAAG 1 cut(s) 78
AcyI GRCGYC 1 cut(s) 1846
AfaI GTAC 4 cut(s) 85, 641, 806, 1096
AfiI CCNNNNNNNGG 4 cut(s) 355, 1104, 1269, 1882
AflII CTTAAG 1 cut(s) 1277
AhdI GACNNNNNGTC 1 cut(s) 1924
AhlI ACTAGT 1 cut(s) 1091
AjnI CCWGG 1 cut(s) 707
AjuI GAANNNNNNNTTGG 2 cut(s) 1664, 1696
AluBI AGCT 9 cut(s) 30, 704, 749, 905, 1276, 1500, 1788, 1823, 1861
AluI AGCT 9 cut(s) 30, 704, 749, 905, 1276, 1500, 1788, 1823, 1861
Alw21I GWGCWC 3 cut(s) 988, 1497, 1647
Alw26I GTCTC 4 cut(s) 1313, 1512, 1762, 1900
AlwI GGATC 2 cut(s) 296, 309
AoxI GGCC 4 cut(s) 372, 1081, 1621, 1734
ApeKI GCWGC 2 cut(s) 1820, 1838
ApoI RAATTY 2 cut(s) 12, 949
AseI ATTAAT 2 cut(s) 51, 1967
Asp700I GAANNNNTTC 2 cut(s) 489, 685
AspLEI GCGC 3 cut(s) 292, 1809, 1848
AspS9I GGNCC 2 cut(s) 372, 1734
AsuC2I CCSGG 1 cut(s) 1876
AsuHPI GGTGA 2 cut(s) 565, 1622
AsuII TTCGAA 1 cut(s) 679
AsuNHI GCTAGC 1 cut(s) 905
BaeI ACNNNNGTAYC 2 cut(s) 1925, 1958
BalI TGGCCA 1 cut(s) 1623
BamHI GGATCC 1 cut(s) 301
BanI GGYRCC 1 cut(s) 1845
BauI CACGAG 1 cut(s) 996
BbsI GAAGAC 1 cut(s) 705
Bbv12I GWGCWC 3 cut(s) 988, 1497, 1647
BbvI GCAGC 2 cut(s) 1832, 1850
BccI CCATC 2 cut(s) 1243, 1945
BciT130I CCWGG 1 cut(s) 709
BclI TGATCA 1 cut(s) 1465
BcnI CCSGG 1 cut(s) 1876
BcoDI GTCTC 4 cut(s) 1313, 1512, 1762, 1900
BcuI ACTAGT 1 cut(s) 1091
BfaI CTAG 8 cut(s) 146, 444, 780, 864, 906, 1092, 1323, 1785
BfmI CTRYAG 2 cut(s) 1914, 1922
BfoI RGCGCY 1 cut(s) 1849
BfrI CTTAAG 1 cut(s) 1277
BfuAI ACCTGC 2 cut(s) 85, 1929
BisI GCNGC 4 cut(s) 1552, 1821, 1839, 1902
BlsI GCNGC 4 cut(s) 1553, 1822, 1840, 1903
Bme1390I CCNGG 2 cut(s) 709, 1876
BmeRI GACNNNNNGTC 1 cut(s) 1924
BmgT120I GGNCC 2 cut(s) 372, 1734
BmiI GGNNCC 5 cut(s) 303, 373, 492, 796, 1847
BmrFI CCNGG 2 cut(s) 709, 1876
BmrI ACTGGG 1 cut(s) 1648
BmsI GCATC 2 cut(s) 119, 729
BmtI GCTAGC 1 cut(s) 909
BmuI ACTGGG 1 cut(s) 1648
BpiI GAAGAC 1 cut(s) 705
BplI GAGNNNNNCTC 4 cut(s) 1509, 1541, 1807, 1839
BpmI CTGGAG 2 cut(s) 918, 1774
Bpu10I CCTNAGC 3 cut(s) 668, 1646, 1824
Bpu14I TTCGAA 1 cut(s) 679
BpuEI CTTGAG 1 cut(s) 595
BpuMI CCSGG 1 cut(s) 1876
Bsa29I ATCGAT 1 cut(s) 433
BsaAI YACGTR 1 cut(s) 1102
BsaHI GRCGYC 1 cut(s) 1846
BsaI GGTCTC 1 cut(s) 1512
BsaJI CCNNGG 5 cut(s) 349, 1072, 1268, 1814, 1874
BsaXI ACNNNNNCTCC 2 cut(s) 1772, 1802
Bsc4I CCNNNNNNNGG 4 cut(s) 355, 1104, 1269, 1882
Bse118I RCCGGY 1 cut(s) 1477
Bse1I ACTGG 4 cut(s) 303, 555, 1643, 1791
Bse3DI GCAATG 3 cut(s) 381, 1588, 1808
BseBI CCWGG 1 cut(s) 709
BseCI ATCGAT 1 cut(s) 433
BseDI CCNNGG 5 cut(s) 349, 1072, 1268, 1814, 1874
BseGI GGATG 3 cut(s) 720, 1254, 1685
BseLI CCNNNNNNNGG 4 cut(s) 355, 1104, 1269, 1882
BseMI GCAATG 3 cut(s) 381, 1588, 1808
BseMII CTCAG 7 cut(s) 104, 515, 1055, 1134, 1423, 1660, 1838
BseNI ACTGG 4 cut(s) 303, 555, 1643, 1791
BseXI GCAGC 2 cut(s) 1832, 1850
BseYI CCCAGC 1 cut(s) 1661
Bsh1236I CGCG 2 cut(s) 1551, 1809
BshFI GGCC 4 cut(s) 374, 1083, 1623, 1736
BshNI GGYRCC 1 cut(s) 1845
BshVI ATCGAT 1 cut(s) 433
BsiHKAI GWGCWC 3 cut(s) 988, 1497, 1647
BsiSI CCGG 2 cut(s) 1478, 1876
BslFI GGGAC 2 cut(s) 1065, 1912
BslI CCNNNNNNNGG 4 cut(s) 355, 1104, 1269, 1882
BsmAI GTCTC 4 cut(s) 1313, 1512, 1762, 1900
BsmFI GGGAC 2 cut(s) 1065, 1912
BsnI GGCC 4 cut(s) 374, 1083, 1623, 1736
Bso31I GGTCTC 1 cut(s) 1512
Bsp119I TTCGAA 1 cut(s) 679
Bsp1286I GDGCHC 3 cut(s) 988, 1497, 1647
Bsp143I GATC 3 cut(s) 301, 467, 1465
BspACI CCGC 3 cut(s) 1551, 1902, 1909
BspANI GGCC 4 cut(s) 374, 1083, 1623, 1736
BspCNI CTCAG 7 cut(s) 103, 514, 1056, 1133, 1422, 1659, 1837
BspDI ATCGAT 1 cut(s) 433
BspFNI CGCG 2 cut(s) 1551, 1809
BspLI GGNNCC 5 cut(s) 303, 373, 492, 796, 1847
BspMAI CTGCAG 2 cut(s) 1918, 1926
BspMI ACCTGC 2 cut(s) 85, 1929
BspOI GCTAGC 1 cut(s) 909
BspPI GGATC 2 cut(s) 296, 309
BspT104I TTCGAA 1 cut(s) 679
BspT107I GGYRCC 1 cut(s) 1845
BspTI CTTAAG 1 cut(s) 1277
BspTNI GGTCTC 1 cut(s) 1512
BsrDI GCAATG 3 cut(s) 381, 1588, 1808
BsrFI RCCGGY 1 cut(s) 1477
BsrI ACTGG 4 cut(s) 303, 555, 1643, 1791
BssAI RCCGGY 1 cut(s) 1477
BssECI CCNNGG 5 cut(s) 349, 1072, 1268, 1814, 1874
BssMI GATC 3 cut(s) 301, 467, 1465
BssNI GRCGYC 1 cut(s) 1846
BssSI CACGAG 1 cut(s) 996
BssT1I CCWWGG 2 cut(s) 349, 1072
Bst2BI CACGAG 1 cut(s) 996
Bst2UI CCWGG 1 cut(s) 709
Bst4CI ACNGT 2 cut(s) 875, 1696
Bst6I CTCTTC 3 cut(s) 36, 54, 1369
BstACI GRCGYC 1 cut(s) 1846
BstAFI CTTAAG 1 cut(s) 1277
BstBAI YACGTR 1 cut(s) 1102
BstBI TTCGAA 1 cut(s) 679
BstC8I GCNNGC 6 cut(s) 233, 777, 839, 907, 1588, 1836
BstF5I GGATG 3 cut(s) 720, 1254, 1685
BstFNI CGCG 2 cut(s) 1551, 1809
BstH2I RGCGCY 1 cut(s) 1849
BstHHI GCGC 3 cut(s) 292, 1809, 1848
BstKTI GATC 3 cut(s) 304, 470, 1468
BstMAI GTCTC 4 cut(s) 1313, 1512, 1762, 1900
BstMBI GATC 3 cut(s) 301, 467, 1465
BstMWI GCNNNNNNNGC 6 cut(s) 107, 734, 1587, 1733, 1826, 1835
BstNI CCWGG 1 cut(s) 709
BstNSI RCATGY 2 cut(s) 775, 863
BstSCI CCNGG 2 cut(s) 707, 1874
BstSFI CTRYAG 2 cut(s) 1914, 1922
BstSNI TACGTA 1 cut(s) 1102
BstUI CGCG 2 cut(s) 1551, 1809
BstV1I GCAGC 2 cut(s) 1832, 1850
BstV2I GAAGAC 1 cut(s) 705
BstX2I RGATCY 1 cut(s) 301
BstYI RGATCY 1 cut(s) 301
Bsu15I ATCGAT 1 cut(s) 433
BsuRI GGCC 4 cut(s) 374, 1083, 1623, 1736
BsuTUI ATCGAT 1 cut(s) 433
BtgZI GCGATG 2 cut(s) 903, 1605
BtsCI GGATG 3 cut(s) 720, 1254, 1685
BtsI GCAGTG 2 cut(s) 1897, 1911
BtsIMutI CAGTG 3 cut(s) 296, 1897, 1911
BveI ACCTGC 2 cut(s) 85, 1929
Cac8I GCNNGC 6 cut(s) 233, 777, 839, 907, 1588, 1836
CfoI GCGC 3 cut(s) 292, 1809, 1848
Cfr10I RCCGGY 1 cut(s) 1477
Cfr13I GGNCC 2 cut(s) 372, 1734
ClaI ATCGAT 1 cut(s) 433
CseI GACGC 1 cut(s) 1463
CsiI ACCWGGT 1 cut(s) 707
Csp6I GTAC 4 cut(s) 84, 640, 805, 1095
CspCI CAANNNNNGTGG 2 cut(s) 943, 978
CviAII CATG 8 cut(s) 513, 623, 738, 772, 785, 860, 1435, 1842
CviQI GTAC 4 cut(s) 84, 640, 805, 1095
DinI GGCGCC 1 cut(s) 1847
DpnI GATC 3 cut(s) 303, 469, 1467
DpnII GATC 3 cut(s) 301, 467, 1465
DraI TTTAAA 1 cut(s) 139
DriI GACNNNNNGTC 1 cut(s) 1924
EaeI YGGCCR 1 cut(s) 1621
Eam1104I CTCTTC 3 cut(s) 36, 54, 1369
Eam1105I GACNNNNNGTC 1 cut(s) 1924
EarI CTCTTC 3 cut(s) 36, 54, 1369
Eco105I TACGTA 1 cut(s) 1102
Eco130I CCWWGG 2 cut(s) 349, 1072
Eco147I AGGCCT 1 cut(s) 1083
Eco31I GGTCTC 1 cut(s) 1512
Eco57I CTGAAG 1 cut(s) 78
EcoRII CCWGG 1 cut(s) 707
EcoT14I CCWWGG 2 cut(s) 349, 1072
EgeI GGCGCC 1 cut(s) 1847
EheI GGCGCC 1 cut(s) 1847
ErhI CCWWGG 2 cut(s) 349, 1072
FaeI CATG 8 cut(s) 516, 626, 741, 775, 788, 863, 1438, 1845
FalI AAGNNNNNCTT 4 cut(s) 1598, 1630, 1617, 1649
FaqI GGGAC 2 cut(s) 1065, 1912
FatI CATG 8 cut(s) 512, 622, 737, 771, 784, 859, 1434, 1841
FbaI TGATCA 1 cut(s) 1465
FblI GTMKAC 1 cut(s) 941
Fnu4HI GCNGC 4 cut(s) 1552, 1821, 1839, 1902
FokI GGATG 3 cut(s) 707, 1261, 1672
Fsp4HI GCNGC 4 cut(s) 1552, 1821, 1839, 1902
FspBI CTAG 8 cut(s) 146, 444, 780, 864, 906, 1092, 1323, 1785
GlaI GCGC 3 cut(s) 291, 1808, 1847
GluI GCNGC 4 cut(s) 1552, 1821, 1839, 1902
GsaI CCCAGC 1 cut(s) 1665
GsuI CTGGAG 2 cut(s) 918, 1774
HaeII RGCGCY 1 cut(s) 1849
HaeIII GGCC 4 cut(s) 374, 1083, 1623, 1736
HapII CCGG 2 cut(s) 1478, 1876
HgaI GACGC 1 cut(s) 1463
HhaI GCGC 3 cut(s) 292, 1809, 1848
Hin1I GRCGYC 1 cut(s) 1846
Hin1II CATG 8 cut(s) 516, 626, 741, 775, 788, 863, 1438, 1845
Hin6I GCGC 3 cut(s) 290, 1807, 1846
HinP1I GCGC 3 cut(s) 290, 1807, 1846
HincII GTYRAC 3 cut(s) 226, 942, 1563
HindII GTYRAC 3 cut(s) 226, 942, 1563
HindIII AAGCTT 1 cut(s) 1274
HpaII CCGG 2 cut(s) 1478, 1876
HphI GGTGA 2 cut(s) 565, 1622
Hpy166II GTNNAC 3 cut(s) 226, 942, 1563
Hpy188I TCNGA 5 cut(s) 504, 918, 1065, 1272, 1373
Hpy8I GTNNAC 3 cut(s) 226, 942, 1563
HpyAV CCTTC 5 cut(s) 1274, 1358, 1571, 1685, 1690
HpyCH4III ACNGT 2 cut(s) 875, 1696
HpyCH4IV ACGT 3 cut(s) 205, 1101, 1181
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 734, 1587, 1733, 1826, 1835
HpySE526I ACGT 3 cut(s) 205, 1101, 1181
Hsp92I GRCGYC 1 cut(s) 1846
Hsp92II CATG 8 cut(s) 516, 626, 741, 775, 788, 863, 1438, 1845
HspAI GCGC 3 cut(s) 290, 1807, 1846
KasI GGCGCC 1 cut(s) 1845
Ksp22I TGATCA 1 cut(s) 1465
Kzo9I GATC 3 cut(s) 301, 467, 1465
LmnI GCTCC 5 cut(s) 794, 902, 1403, 1793, 1798
Lsp1109I GCAGC 2 cut(s) 1832, 1850
LweI GCATC 2 cut(s) 119, 729
MabI ACCWGGT 1 cut(s) 707
MaeI CTAG 8 cut(s) 146, 444, 780, 864, 906, 1092, 1323, 1785
MaeII ACGT 3 cut(s) 205, 1101, 1181
MaeIII GTNAC 3 cut(s) 32, 451, 1610
MalI GATC 3 cut(s) 303, 469, 1467
MboI GATC 3 cut(s) 301, 467, 1465
MflI RGATCY 1 cut(s) 301
MhlI GDGCHC 3 cut(s) 988, 1497, 1647
MlsI TGGCCA 1 cut(s) 1623
MluCI AATT 6 cut(s) 12, 239, 485, 827, 949, 1968
MluNI TGGCCA 1 cut(s) 1623
Mly113I GGCGCC 1 cut(s) 1846
MlyI GAGTC 3 cut(s) 641, 917, 947
MmeI TCCRAC 3 cut(s) 772, 1188, 1695
MnlI CCTC 8 cut(s) 472, 1094, 1204, 1278, 1319, 1533, 1809, 1879
Mox20I TGGCCA 1 cut(s) 1623
MroXI GAANNNNTTC 2 cut(s) 489, 685
MscI TGGCCA 1 cut(s) 1623
MseI TTAA 8 cut(s) 51, 138, 695, 756, 1278, 1419, 1730, 1967
MslI CAYNNNNRTG 2 cut(s) 551, 864
Msp20I TGGCCA 1 cut(s) 1623
MspCI CTTAAG 1 cut(s) 1277
MspI CCGG 2 cut(s) 1478, 1876
MspR9I CCNGG 2 cut(s) 709, 1876
MvaI CCWGG 1 cut(s) 709
MvnI CGCG 2 cut(s) 1551, 1809
MwoI GCNNNNNNNGC 6 cut(s) 107, 734, 1587, 1733, 1826, 1835
NarI GGCGCC 1 cut(s) 1846
NciI CCSGG 1 cut(s) 1876
NdeII GATC 3 cut(s) 301, 467, 1465
NheI GCTAGC 1 cut(s) 905
NlaIII CATG 8 cut(s) 516, 626, 741, 775, 788, 863, 1438, 1845
NlaIV GGNNCC 5 cut(s) 303, 373, 492, 796, 1847
NmuCI GTSAC 2 cut(s) 32, 1610
NspI RCATGY 2 cut(s) 775, 863
NspV TTCGAA 1 cut(s) 679
PceI AGGCCT 1 cut(s) 1083
PdmI GAANNNNTTC 2 cut(s) 489, 685
PfeI GAWTC 8 cut(s) 119, 556, 681, 992, 1007, 1296, 1438, 1651
PkrI GCNGC 4 cut(s) 1553, 1822, 1840, 1903
PleI GAGTC 3 cut(s) 640, 917, 946
PluTI GGCGCC 1 cut(s) 1849
PpsI GAGTC 3 cut(s) 640, 917, 946
Ppu21I YACGTR 1 cut(s) 1102
PshBI ATTAAT 2 cut(s) 51, 1967
Psp6I CCWGG 1 cut(s) 707
PspFI CCCAGC 1 cut(s) 1661
PspGI CCWGG 1 cut(s) 707
PspN4I GGNNCC 5 cut(s) 303, 373, 492, 796, 1847
PspPI GGNCC 2 cut(s) 372, 1734
PstI CTGCAG 2 cut(s) 1918, 1926
PsuI RGATCY 1 cut(s) 301
RsaI GTAC 4 cut(s) 85, 641, 806, 1096
RsaNI GTAC 4 cut(s) 84, 640, 805, 1095
RseI CAYNNNNRTG 2 cut(s) 551, 864
SalI GTCGAC 1 cut(s) 940
SaqAI TTAA 8 cut(s) 51, 138, 695, 756, 1278, 1419, 1730, 1967
SatI GCNGC 4 cut(s) 1552, 1821, 1839, 1902
Sau3AI GATC 3 cut(s) 301, 467, 1465
Sau96I GGNCC 2 cut(s) 372, 1734
SchI GAGTC 3 cut(s) 641, 917, 947
ScrFI CCNGG 2 cut(s) 709, 1876
SduI GDGCHC 3 cut(s) 988, 1497, 1647
SexAI ACCWGGT 1 cut(s) 707
SfaNI GCATC 2 cut(s) 119, 729
SfcI CTRYAG 2 cut(s) 1914, 1922
SfoI GGCGCC 1 cut(s) 1847
SfuI TTCGAA 1 cut(s) 679
SmiMI CAYNNNNRTG 2 cut(s) 551, 864
SmlI CTYRAG 2 cut(s) 610, 1277
SmoI CTYRAG 2 cut(s) 610, 1277
SnaBI TACGTA 1 cut(s) 1102
SpeI ACTAGT 1 cut(s) 1091
Sse9I AATT 6 cut(s) 12, 239, 485, 827, 949, 1968
SseBI AGGCCT 1 cut(s) 1083
SsiI CCGC 3 cut(s) 1551, 1902, 1909
SspDI GGCGCC 1 cut(s) 1845
SspI AATATT 1 cut(s) 49
SspMI CTAG 8 cut(s) 146, 444, 780, 864, 906, 1092, 1323, 1785
StuI AGGCCT 1 cut(s) 1083
StyD4I CCNGG 2 cut(s) 707, 1874
StyI CCWWGG 2 cut(s) 349, 1072
TaaI ACNGT 2 cut(s) 875, 1696
TaiI ACGT 3 cut(s) 208, 1104, 1184
TasI AATT 6 cut(s) 12, 239, 485, 827, 949, 1968
TatI WGTACW 1 cut(s) 639
TauI GCSGC 2 cut(s) 1554, 1904
TfiI GAWTC 8 cut(s) 119, 556, 681, 992, 1007, 1296, 1438, 1651
Tru1I TTAA 8 cut(s) 51, 138, 695, 756, 1278, 1419, 1730, 1967
Tru9I TTAA 8 cut(s) 51, 138, 695, 756, 1278, 1419, 1730, 1967
TscAI CASTG 3 cut(s) 303, 1897, 1918
TseFI GTSAC 2 cut(s) 32, 1610
TseI GCWGC 2 cut(s) 1820, 1838
Tsp45I GTSAC 2 cut(s) 32, 1610
TspDTI ATGAA 3 cut(s) 185, 415, 1451
TspGWI ACGGA 1 cut(s) 1390
TspRI CASTG 3 cut(s) 303, 1897, 1918
Vha464I CTTAAG 1 cut(s) 1277
VspI ATTAAT 2 cut(s) 51, 1967
XapI RAATTY 2 cut(s) 12, 949
XceI RCATGY 2 cut(s) 775, 863
XmiI GTMKAC 1 cut(s) 941
XmnI GAANNNNTTC 2 cut(s) 489, 685
XspI CTAG 8 cut(s) 146, 444, 780, 864, 906, 1092, 1323, 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.